RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 GNAI3P08754 354 aa25.05■■□□□ 1.6
COL6A2-208ENST00000485591 UBTFL1P0CB47 393 aaPredicted RBP25.05■■□□□ 1.6
COL6A2-208ENST00000485591 C20orf194Q5TEA3 1177 aa25.05■■□□□ 1.6
COL6A2-208ENST00000485591 ZNF622Q969S3 477 aaKnown RBP eCLIP25.05■■□□□ 1.6
COL6A2-208ENST00000485591 RBM17Q96I25 401 aaKnown RBP25.05■■□□□ 1.6
COL6A2-208ENST00000485591 SUCLG2Q96I99 432 aa25.05■■□□□ 1.6
COL6A2-208ENST00000485591 RTL9Q8NET4 1388 aa25.05■■□□□ 1.6
COL6A2-208ENST00000485591 FOXO4P98177 505 aa25.04■■□□□ 1.6
COL6A2-208ENST00000485591 MVPQ14764 893 aaKnown RBP25.04■■□□□ 1.6
COL6A2-208ENST00000485591 CCDC152Q4G0S7 254 aa25.04■■□□□ 1.6
COL6A2-208ENST00000485591 TTLL11Q8NHH1 800 aa25.04■■□□□ 1.6
COL6A2-208ENST00000485591 CNKSR1Q969H4 720 aa25.04■■□□□ 1.6
COL6A2-208ENST00000485591 KAZALD1Q96I82 304 aa25.04■■□□□ 1.6
COL6A2-208ENST00000485591 CRAMP1Q96RY5 1269 aa25.04■■□□□ 1.6
COL6A2-208ENST00000485591 SPEF2Q9C093 1822 aa25.03■■□□□ 1.6
COL6A2-208ENST00000485591 CSF1RP07333 972 aa25.03■■□□□ 1.6
COL6A2-208ENST00000485591 EPHA10Q5JZY3 1008 aa25.03■■□□□ 1.6
COL6A2-208ENST00000485591 HDAC5Q9UQL6 1122 aa25.03■■□□□ 1.6
COL6A2-208ENST00000485591 COL4A1P02462 1669 aa25.03■■□□□ 1.6
COL6A2-208ENST00000485591 ALDH1B1P30837 517 aa25.02■■□□□ 1.6
COL6A2-208ENST00000485591 DDX46Q7L014 1031 aaKnown RBP25.02■■□□□ 1.6
COL6A2-208ENST00000485591 TTLL6Q8N841 843 aa25.02■■□□□ 1.6
COL6A2-208ENST00000485591 COG6Q9Y2V7 657 aa25.02■■□□□ 1.6
COL6A2-208ENST00000485591 LRRC37AA6NMS7 1700 aa25.01■■□□□ 1.59
COL6A2-208ENST00000485591 DALRD3Q5D0E6 543 aaKnown RBP25.01■■□□□ 1.59
COL6A2-208ENST00000485591 BICC1Q9H694 974 aaKnown RBP25.01■■□□□ 1.59
COL6A2-208ENST00000485591 DDX19BQ9UMR2 479 aa25.01■■□□□ 1.59
COL6A2-208ENST00000485591 ZBTB7BO15156 539 aaPredicted RBP25■■□□□ 1.59
COL6A2-208ENST00000485591 RABL6Q3YEC7 729 aaPredicted RBP25■■□□□ 1.59
COL6A2-208ENST00000485591 PRPF40BQ6NWY9 871 aaKnown RBP25■■□□□ 1.59
COL6A2-208ENST00000485591 SUPT16HQ9Y5B9 1047 aaKnown RBP25■■□□□ 1.59
COL6A2-208ENST00000485591 LMBR1LQ6UX01 489 aa24.99■■□□□ 1.59
COL6A2-208ENST00000485591 ANKRD44Q8N8A2 993 aa24.99■■□□□ 1.59
COL6A2-208ENST00000485591 CCDC85AQ96PX6 553 aaPredicted RBP24.99■■□□□ 1.59
COL6A2-208ENST00000485591 GREM2Q9H772 168 aa24.99■■□□□ 1.59
COL6A2-208ENST00000485591 WWC3Q9ULE0 1092 aa24.99■■□□□ 1.59
COL6A2-208ENST00000485591 LRRFIP2Q9Y608 721 aaKnown RBP24.99■■□□□ 1.59
COL6A2-208ENST00000485591 GRAPQ13588 217 aa24.98■■□□□ 1.59
COL6A2-208ENST00000485591 FAM161AQ3B820 660 aa24.98■■□□□ 1.59
COL6A2-208ENST00000485591 GRAPLQ8TC17 118 aaPredicted RBP24.98■■□□□ 1.59
COL6A2-208ENST00000485591 BCS1LQ9Y276 419 aa24.98■■□□□ 1.59
COL6A2-208ENST00000485591 SEC31BQ9NQW1 1179 aa24.97■■□□□ 1.59
COL6A2-208ENST00000485591 GNAI2P04899 355 aa24.96■■□□□ 1.59
COL6A2-208ENST00000485591 CELF1Q92879 486 aaKnown RBP24.96■■□□□ 1.59
COL6A2-208ENST00000485591 CHMP4BQ9H444 224 aaKnown RBP24.96■■□□□ 1.59
COL6A2-208ENST00000485591 PPEF1O14829 653 aaPredicted RBP24.95■■□□□ 1.58
COL6A2-208ENST00000485591 BBOX1O75936 387 aa24.95■■□□□ 1.58
COL6A2-208ENST00000485591 YBX3P16989 372 aaKnown RBP eCLIP24.95■■□□□ 1.58
COL6A2-208ENST00000485591 ITGA6P23229 1130 aa24.95■■□□□ 1.58
COL6A2-208ENST00000485591 CDC5LQ99459 802 aaKnown RBP24.95■■□□□ 1.58
COL6A2-208ENST00000485591 CHMP3Q9Y3E7 222 aa24.95■■□□□ 1.58
COL6A2-208ENST00000485591 FER1L6Q2WGJ9 1857 aa24.95■■□□□ 1.58
COL6A2-208ENST00000485591 CENPBP07199 599 aaPredicted RBP24.94■■□□□ 1.58
COL6A2-208ENST00000485591 IFIT5Q13325 482 aaKnown RBP24.94■■□□□ 1.58
COL6A2-208ENST00000485591 TMC4Q7Z404 712 aa24.94■■□□□ 1.58
COL6A2-208ENST00000485591 PELP1Q8IZL8 1130 aaKnown RBP24.94■■□□□ 1.58
COL6A2-208ENST00000485591 A0A1B0GUL6 1792 aa24.93■■□□□ 1.58
COL6A2-208ENST00000485591 ANKRD18BA2A2Z9 1011 aa24.93■■□□□ 1.58
COL6A2-208ENST00000485591 RPS8P62241 208 aaKnown RBP24.93■■□□□ 1.58
COL6A2-208ENST00000485591 C7orf43Q8WVR3 580 aa24.93■■□□□ 1.58
COL6A2-208ENST00000485591 MTX1Q13505 466 aa24.92■■□□□ 1.58
COL6A2-208ENST00000485591 GPR162Q16538 588 aa24.92■■□□□ 1.58
COL6A2-208ENST00000485591 CCDC57Q2TAC2 916 aa24.92■■□□□ 1.58
COL6A2-208ENST00000485591 ANKRD18AQ8IVF6 992 aa24.92■■□□□ 1.58
COL6A2-208ENST00000485591 ZBTB40Q9NUA8 1239 aa24.92■■□□□ 1.58
COL6A2-208ENST00000485591 SOGA3Q5TF21 947 aa24.91■■□□□ 1.58
COL6A2-208ENST00000485591 ATP6V0A2Q9Y487 856 aa24.91■■□□□ 1.58
COL6A2-208ENST00000485591 SNED1Q8TER0 1413 aa24.91■■□□□ 1.58
COL6A2-208ENST00000485591 LTBP1Q14766 1721 aa24.91■■□□□ 1.58
COL6A2-208ENST00000485591 C21orf2O43822 256 aa24.9■■□□□ 1.58
COL6A2-208ENST00000485591 C1orf115Q9H7X2 142 aa24.9■■□□□ 1.58
COL6A2-208ENST00000485591 IGHMBP2P38935 993 aaKnown RBP24.89■■□□□ 1.58
COL6A2-208ENST00000485591 CC2D2BQ6DHV5 1058 aa24.89■■□□□ 1.58
COL6A2-208ENST00000485591 SP8Q8IXZ3 490 aa24.89■■□□□ 1.58
COL6A2-208ENST00000485591 ZNF219Q9P2Y4 722 aaPredicted RBP24.89■■□□□ 1.58
COL6A2-208ENST00000485591 CCDC93Q567U6 631 aa24.88■■□□□ 1.57
COL6A2-208ENST00000485591 CRBNQ96SW2 442 aa24.88■■□□□ 1.57
COL6A2-208ENST00000485591 DCAF8L1A6NGE4 600 aa24.87■■□□□ 1.57
COL6A2-208ENST00000485591 GRIN3BO60391 1043 aa24.87■■□□□ 1.57
COL6A2-208ENST00000485591 RFX5P48382 616 aaPredicted RBP24.87■■□□□ 1.57
COL6A2-208ENST00000485591 BSDC1Q9NW68 430 aaPredicted RBP24.87■■□□□ 1.57
COL6A2-208ENST00000485591 GRIPAP1Q4V328 841 aa24.86■■□□□ 1.57
COL6A2-208ENST00000485591 TAF7LQ5H9L4 462 aa24.86■■□□□ 1.57
COL6A2-208ENST00000485591 OLFM4Q6UX06 510 aa24.86■■□□□ 1.57
COL6A2-208ENST00000485591 SLC51AQ86UW1 340 aa24.86■■□□□ 1.57
COL6A2-208ENST00000485591 MPHOSPH8Q99549 860 aa24.86■■□□□ 1.57
COL6A2-208ENST00000485591 TMX4Q9H1E5 349 aaPredicted RBP24.86■■□□□ 1.57
COL6A2-208ENST00000485591 DUOX1Q9NRD9 1551 aa24.85■■□□□ 1.57
COL6A2-208ENST00000485591 SRGAP3O43295 1099 aa24.85■■□□□ 1.57
COL6A2-208ENST00000485591 ZNF594Q96JF6 807 aaPredicted RBP24.85■■□□□ 1.57
COL6A2-208ENST00000485591 SBF1O95248 1867 aa24.85■■□□□ 1.57
COL6A2-208ENST00000485591 ATP8B2P98198 1209 aa24.84■■□□□ 1.57
COL6A2-208ENST00000485591 CEP85Q6P2H3 762 aa24.84■■□□□ 1.57
COL6A2-208ENST00000485591 RTKN2Q8IZC4 609 aa24.84■■□□□ 1.57
COL6A2-208ENST00000485591 CCDC88AQ3V6T2 1871 aa24.83■■□□□ 1.57
COL6A2-208ENST00000485591 PNMA6EA0A0J9YXQ4 647 aa24.83■■□□□ 1.57
COL6A2-208ENST00000485591 PTPN12Q05209 780 aaKnown RBP24.83■■□□□ 1.57
COL6A2-208ENST00000485591 LDHAL6AQ6ZMR3 332 aa24.82■■□□□ 1.56
COL6A2-208ENST00000485591 KLHDC4Q8TBB5 520 aa24.82■■□□□ 1.56
COL6A2-208ENST00000485591 LTBP3Q9NS15 1303 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms