RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 ATP5J2-PTCD1G3V325 749 aa25.03■■□□□ 1.6
COL27A1-205ENST00000485397 CXCL9Q07325 125 aa25.03■■□□□ 1.6
COL27A1-205ENST00000485397 ZNRF3Q9ULT6 936 aa25.03■■□□□ 1.6
COL27A1-205ENST00000485397 FMR1Q06787 632 aaKnown RBP eCLIP25.02■■□□□ 1.6
COL27A1-205ENST00000485397 FAM89AQ96GI7 184 aa25.02■■□□□ 1.6
COL27A1-205ENST00000485397 APAF1O14727 1248 aa25.01■■□□□ 1.59
COL27A1-205ENST00000485397 CAPN15O75808 1086 aa25.01■■□□□ 1.59
COL27A1-205ENST00000485397 ZNF853P0CG23 659 aa25.01■■□□□ 1.59
COL27A1-205ENST00000485397 HYPKQ9NX55 129 aa25.01■■□□□ 1.59
COL27A1-205ENST00000485397 KIAA2012Q0VF49 1180 aa25■■□□□ 1.59
COL27A1-205ENST00000485397 USP50Q70EL3 339 aaPredicted RBP25■■□□□ 1.59
COL27A1-205ENST00000485397 FOXN1O15353 648 aa24.99■■□□□ 1.59
COL27A1-205ENST00000485397 TAF1P21675 1872 aa24.99■■□□□ 1.59
COL27A1-205ENST00000485397 DEFB115Q30KQ5 88 aa24.99■■□□□ 1.59
COL27A1-205ENST00000485397 RTL5Q5HYW3 569 aaPredicted RBP24.99■■□□□ 1.59
COL27A1-205ENST00000485397 GPRC5DQ9NZD1 345 aa24.99■■□□□ 1.59
COL27A1-205ENST00000485397 RASSF10A6NK89 507 aa24.98■■□□□ 1.59
COL27A1-205ENST00000485397 ELL2O00472 640 aaPredicted RBP24.98■■□□□ 1.59
COL27A1-205ENST00000485397 ABT1Q9ULW3 272 aaKnown RBP24.98■■□□□ 1.59
COL27A1-205ENST00000485397 RAD17O75943 681 aa24.97■■□□□ 1.59
COL27A1-205ENST00000485397 GMPSP49915 693 aaPredicted RBP24.97■■□□□ 1.59
COL27A1-205ENST00000485397 SF3B3Q15393 1217 aaKnown RBP24.97■■□□□ 1.59
COL27A1-205ENST00000485397 CIAPIN1Q6FI81 312 aa24.97■■□□□ 1.59
COL27A1-205ENST00000485397 CELF1Q92879 486 aaKnown RBP24.97■■□□□ 1.59
COL27A1-205ENST00000485397 ADARB2Q9NS39 739 aaKnown RBP24.97■■□□□ 1.59
COL27A1-205ENST00000485397 DDX60Q8IY21 1712 aaKnown RBP24.96■■□□□ 1.59
COL27A1-205ENST00000485397 TRAF5O00463 557 aa24.96■■□□□ 1.59
COL27A1-205ENST00000485397 TMC4Q7Z404 712 aa24.96■■□□□ 1.59
COL27A1-205ENST00000485397 PHAXQ9H814 394 aaKnown RBP24.96■■□□□ 1.59
COL27A1-205ENST00000485397 IFT57Q9NWB7 429 aa24.96■■□□□ 1.59
COL27A1-205ENST00000485397 TRIM28Q13263 835 aaKnown RBP24.95■■□□□ 1.58
COL27A1-205ENST00000485397 RIC3Q7Z5B4 369 aa24.95■■□□□ 1.58
COL27A1-205ENST00000485397 YDJCA8MPS7 323 aa24.94■■□□□ 1.58
COL27A1-205ENST00000485397 GNAI1P63096 354 aa24.94■■□□□ 1.58
COL27A1-205ENST00000485397 DUOX1Q9NRD9 1551 aa24.93■■□□□ 1.58
COL27A1-205ENST00000485397 IRS4O14654 1257 aaPredicted RBP24.93■■□□□ 1.58
COL27A1-205ENST00000485397 AIDAQ96BJ3 306 aa24.93■■□□□ 1.58
COL27A1-205ENST00000485397 BCL2L13Q9BXK5 485 aa24.93■■□□□ 1.58
COL27A1-205ENST00000485397 WBP1LQ9NX94 342 aa24.93■■□□□ 1.58
COL27A1-205ENST00000485397 NSFL1CQ9UNZ2 370 aaKnown RBP24.93■■□□□ 1.58
COL27A1-205ENST00000485397 WDR33Q9C0J8 1336 aaKnown RBP24.92■■□□□ 1.58
COL27A1-205ENST00000485397 COL4A1P02462 1669 aa24.92■■□□□ 1.58
COL27A1-205ENST00000485397 CALD1Q05682 793 aaKnown RBP24.92■■□□□ 1.58
COL27A1-205ENST00000485397 GOLGA2Q08379 1002 aa24.92■■□□□ 1.58
COL27A1-205ENST00000485397 TNIP1Q15025 636 aa24.92■■□□□ 1.58
COL27A1-205ENST00000485397 CST9Q5W186 159 aa24.92■■□□□ 1.58
COL27A1-205ENST00000485397 C8orf58Q8NAV2 365 aa24.92■■□□□ 1.58
COL27A1-205ENST00000485397 SHTN1A0MZ66 631 aa24.9■■□□□ 1.58
COL27A1-205ENST00000485397 RIMBP2O15034 1052 aa24.9■■□□□ 1.58
COL27A1-205ENST00000485397 CTCFP49711 727 aaPredicted RBP24.9■■□□□ 1.58
COL27A1-205ENST00000485397 HIRAP54198 1017 aaPredicted RBP24.9■■□□□ 1.58
COL27A1-205ENST00000485397 GPSM2P81274 684 aa24.9■■□□□ 1.58
COL27A1-205ENST00000485397 WASHC4Q2M389 1173 aa24.9■■□□□ 1.58
COL27A1-205ENST00000485397 MYD88Q99836 296 aa24.9■■□□□ 1.58
COL27A1-205ENST00000485397 LRRC37AA6NMS7 1700 aa24.89■■□□□ 1.58
COL27A1-205ENST00000485397 ZBTB38Q8NAP3 1195 aaPredicted RBP24.89■■□□□ 1.58
COL27A1-205ENST00000485397 TRPM4Q8TD43 1214 aa24.89■■□□□ 1.58
COL27A1-205ENST00000485397 DBNDD1Q9H9R9 158 aa24.89■■□□□ 1.58
COL27A1-205ENST00000485397 PRDM10Q9NQV6 1147 aa24.89■■□□□ 1.58
COL27A1-205ENST00000485397 POLLQ9UGP5 575 aa24.89■■□□□ 1.58
COL27A1-205ENST00000485397 CDHR2Q9BYE9 1310 aa24.88■■□□□ 1.57
COL27A1-205ENST00000485397 C6orf229H3BNL8 230 aa24.88■■□□□ 1.57
COL27A1-205ENST00000485397 RPS8P62241 208 aaKnown RBP24.88■■□□□ 1.57
COL27A1-205ENST00000485397 PAXIP1Q6ZW49 1069 aaPredicted RBP24.88■■□□□ 1.57
COL27A1-205ENST00000485397 JARID2Q92833 1246 aaPredicted RBP24.88■■□□□ 1.57
COL27A1-205ENST00000485397 GLIS2Q9BZE0 524 aaPredicted RBP24.88■■□□□ 1.57
COL27A1-205ENST00000485397 CNOT7Q9UIV1 285 aaKnown RBP24.88■■□□□ 1.57
COL27A1-205ENST00000485397 ZBTB12Q9Y330 459 aaPredicted RBP24.88■■□□□ 1.57
COL27A1-205ENST00000485397 CCDC184Q52MB2 194 aa24.87■■□□□ 1.57
COL27A1-205ENST00000485397 CYP4F22Q6NT55 531 aa24.87■■□□□ 1.57
COL27A1-205ENST00000485397 CAPNS2Q96L46 248 aa24.87■■□□□ 1.57
COL27A1-205ENST00000485397 GPR101Q96P66 508 aaPredicted RBP24.87■■□□□ 1.57
COL27A1-205ENST00000485397 SEC31BQ9NQW1 1179 aa24.87■■□□□ 1.57
COL27A1-205ENST00000485397 PGAP2Q9UHJ9 254 aa24.87■■□□□ 1.57
COL27A1-205ENST00000485397 PSMD14O00487 310 aa24.86■■□□□ 1.57
COL27A1-205ENST00000485397 LBX1P52954 281 aa24.86■■□□□ 1.57
COL27A1-205ENST00000485397 GRM1Q13255 1194 aa24.86■■□□□ 1.57
COL27A1-205ENST00000485397 TLL2Q9Y6L7 1015 aa24.86■■□□□ 1.57
COL27A1-205ENST00000485397 CELF2O95319 508 aaKnown RBP24.85■■□□□ 1.57
COL27A1-205ENST00000485397 DOK7Q18PE1 504 aa24.85■■□□□ 1.57
COL27A1-205ENST00000485397 MICALL2Q8IY33 904 aa24.85■■□□□ 1.57
COL27A1-205ENST00000485397 TSPYL6Q8N831 410 aa24.85■■□□□ 1.57
COL27A1-205ENST00000485397 CCDC191Q8NCU4 936 aa24.85■■□□□ 1.57
COL27A1-205ENST00000485397 TRPM7Q96QT4 1865 aa24.84■■□□□ 1.57
COL27A1-205ENST00000485397 H7C1D1 291 aa24.84■■□□□ 1.57
COL27A1-205ENST00000485397 MAP2K1Q02750 393 aaPredicted RBP24.84■■□□□ 1.57
COL27A1-205ENST00000485397 CCDC30Q5VVM6 783 aa24.84■■□□□ 1.57
COL27A1-205ENST00000485397 TBC1D16Q8TBP0 767 aa24.84■■□□□ 1.57
COL27A1-205ENST00000485397 ZC3H15Q8WU90 426 aaKnown RBP24.84■■□□□ 1.57
COL27A1-205ENST00000485397 METTL22Q9BUU2 404 aaPredicted RBP24.84■■□□□ 1.57
COL27A1-205ENST00000485397 KCNQ5Q9NR82 932 aa24.84■■□□□ 1.57
COL27A1-205ENST00000485397 ECE2O60344 883 aa24.83■■□□□ 1.57
COL27A1-205ENST00000485397 PCCAP05165 728 aaPredicted RBP24.83■■□□□ 1.57
COL27A1-205ENST00000485397 HSPA8P11142 646 aaKnown RBP24.83■■□□□ 1.57
COL27A1-205ENST00000485397 ECE1P42892 770 aa24.83■■□□□ 1.57
COL27A1-205ENST00000485397 CCDC85AQ96PX6 553 aaPredicted RBP24.83■■□□□ 1.57
COL27A1-205ENST00000485397 EYA3Q99504 573 aa24.83■■□□□ 1.57
COL27A1-205ENST00000485397 CWC25Q9NXE8 425 aaPredicted RBP24.83■■□□□ 1.57
COL27A1-205ENST00000485397 SAMD7Q7Z3H4 446 aa24.82■■□□□ 1.56
COL27A1-205ENST00000485397 DPF2Q92785 391 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms