RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 LTBP3Q9NS15 1303 aa20.64■□□□□ 0.89
DDR1-246ENST00000485023 PDE8AO60658 829 aa20.64■□□□□ 0.89
DDR1-246ENST00000485023 RTKN2Q8IZC4 609 aa20.64■□□□□ 0.89
DDR1-246ENST00000485023 CELF1Q92879 486 aaKnown RBP20.64■□□□□ 0.89
DDR1-246ENST00000485023 SNED1Q8TER0 1413 aa20.63■□□□□ 0.89
DDR1-246ENST00000485023 TAF1P21675 1872 aa20.63■□□□□ 0.89
DDR1-246ENST00000485023 HSP90B1P14625 803 aaKnown RBP20.63■□□□□ 0.89
DDR1-246ENST00000485023 BEND3Q5T5X7 828 aa20.63■□□□□ 0.89
DDR1-246ENST00000485023 TMX4Q9H1E5 349 aaPredicted RBP20.63■□□□□ 0.89
DDR1-246ENST00000485023 ATP6V0A2Q9Y487 856 aa20.63■□□□□ 0.89
DDR1-246ENST00000485023 SEC31BQ9NQW1 1179 aa20.62■□□□□ 0.89
DDR1-246ENST00000485023 CCDC88AQ3V6T2 1871 aa20.61■□□□□ 0.89
DDR1-246ENST00000485023 H7C1W4 665 aa20.61■□□□□ 0.89
DDR1-246ENST00000485023 BBOX1O75936 387 aa20.61■□□□□ 0.89
DDR1-246ENST00000485023 CTSWP56202 376 aa20.61■□□□□ 0.89
DDR1-246ENST00000485023 ALDH1L2Q3SY69 923 aa20.61■□□□□ 0.89
DDR1-246ENST00000485023 CCDC152Q4G0S7 254 aa20.61■□□□□ 0.89
DDR1-246ENST00000485023 CC2D2BQ6DHV5 1058 aa20.61■□□□□ 0.89
DDR1-246ENST00000485023 PTPRCP08575 1304 aa20.59■□□□□ 0.89
DDR1-246ENST00000485023 ZBED9Q6R2W3 1325 aa20.59■□□□□ 0.89
DDR1-246ENST00000485023 CT47B1P0C2W7 299 aaPredicted RBP20.59■□□□□ 0.89
DDR1-246ENST00000485023 IARSP41252 1262 aaKnown RBP20.59■□□□□ 0.89
DDR1-246ENST00000485023 SRCIN1Q9C0H9 1055 aa20.59■□□□□ 0.89
DDR1-246ENST00000485023 NMRK2Q9NPI5 230 aa20.59■□□□□ 0.89
DDR1-246ENST00000485023 CASP7P55210 303 aa20.58■□□□□ 0.89
DDR1-246ENST00000485023 SP8Q8IXZ3 490 aa20.58■□□□□ 0.89
DDR1-246ENST00000485023 PSMD1Q99460 953 aa20.58■□□□□ 0.89
DDR1-246ENST00000485023 ZC3H4Q9UPT8 1303 aaKnown RBP20.57■□□□□ 0.88
DDR1-246ENST00000485023 DPP8Q6V1X1 898 aaPredicted RBP20.57■□□□□ 0.88
DDR1-246ENST00000485023 TTLL11Q8NHH1 800 aa20.57■□□□□ 0.88
DDR1-246ENST00000485023 GREM2Q9H772 168 aa20.57■□□□□ 0.88
DDR1-246ENST00000485023 KDM2BQ8NHM5 1336 aa20.56■□□□□ 0.88
DDR1-246ENST00000485023 LRRC37AA6NMS7 1700 aa20.56■□□□□ 0.88
DDR1-246ENST00000485023 RARSP54136 660 aaKnown RBP20.56■□□□□ 0.88
DDR1-246ENST00000485023 RPS8P62241 208 aaKnown RBP20.56■□□□□ 0.88
DDR1-246ENST00000485023 MPNDQ8N594 471 aa20.56■□□□□ 0.88
DDR1-246ENST00000485023 C9orf78Q9NZ63 289 aaPredicted RBP20.56■□□□□ 0.88
DDR1-246ENST00000485023 NOB1Q9ULX3 412 aaKnown RBP20.56■□□□□ 0.88
DDR1-246ENST00000485023 COL4A5P29400 1685 aa20.56■□□□□ 0.88
DDR1-246ENST00000485023 GRM8O00222 908 aa20.55■□□□□ 0.88
DDR1-246ENST00000485023 ALDH1L1O75891 902 aa20.55■□□□□ 0.88
DDR1-246ENST00000485023 FAM161AQ3B820 660 aa20.55■□□□□ 0.88
DDR1-246ENST00000485023 TMC4Q7Z404 712 aa20.55■□□□□ 0.88
DDR1-246ENST00000485023 DICER1Q9UPY3 1922 aaKnown RBP20.55■□□□□ 0.88
DDR1-246ENST00000485023 PPIP5K2O43314 1243 aa20.54■□□□□ 0.88
DDR1-246ENST00000485023 AOC3Q16853 763 aa20.54■□□□□ 0.88
DDR1-246ENST00000485023 GRIPAP1Q4V328 841 aa20.54■□□□□ 0.88
DDR1-246ENST00000485023 ANKRD18AQ8IVF6 992 aa20.54■□□□□ 0.88
DDR1-246ENST00000485023 LARGE2Q8N3Y3 721 aa20.54■□□□□ 0.88
DDR1-246ENST00000485023 NSFL1CQ9UNZ2 370 aaKnown RBP20.54■□□□□ 0.88
DDR1-246ENST00000485023 CHMP3Q9Y3E7 222 aa20.54■□□□□ 0.88
DDR1-246ENST00000485023 DUOX1Q9NRD9 1551 aa20.54■□□□□ 0.88
DDR1-246ENST00000485023 ZNF541Q9H0D2 1346 aa20.53■□□□□ 0.88
DDR1-246ENST00000485023 MYH3P11055 1940 aa20.53■□□□□ 0.88
DDR1-246ENST00000485023 GLTPD2A6NH11 291 aa20.53■□□□□ 0.88
DDR1-246ENST00000485023 GPSM2P81274 684 aa20.53■□□□□ 0.88
DDR1-246ENST00000485023 PLA2G12BQ9BX93 195 aa20.53■□□□□ 0.88
DDR1-246ENST00000485023 RRAGCQ9HB90 399 aa20.53■□□□□ 0.88
DDR1-246ENST00000485023 KIF3CO14782 793 aa20.52■□□□□ 0.88
DDR1-246ENST00000485023 EPHA10Q5JZY3 1008 aa20.52■□□□□ 0.88
DDR1-246ENST00000485023 JDP2Q8WYK2 163 aa20.52■□□□□ 0.88
DDR1-246ENST00000485023 GPR101Q96P66 508 aaPredicted RBP20.52■□□□□ 0.88
DDR1-246ENST00000485023 CDC5LQ99459 802 aaKnown RBP20.52■□□□□ 0.88
DDR1-246ENST00000485023 SPEF2Q9C093 1822 aa20.52■□□□□ 0.88
DDR1-246ENST00000485023 BCAR3O75815 825 aa20.51■□□□□ 0.87
DDR1-246ENST00000485023 DDNO94850 711 aaPredicted RBP20.51■□□□□ 0.87
DDR1-246ENST00000485023 NBPF7P0C2Y1 421 aaPredicted RBP20.51■□□□□ 0.87
DDR1-246ENST00000485023 ITGA6P23229 1130 aa20.51■□□□□ 0.87
DDR1-246ENST00000485023 FOXO4P98177 505 aa20.51■□□□□ 0.87
DDR1-246ENST00000485023 DPY19L2Q6NUT2 758 aa20.51■□□□□ 0.87
DDR1-246ENST00000485023 SUPT20HQ8NEM7 779 aa20.51■□□□□ 0.87
DDR1-246ENST00000485023 KIF16BQ96L93 1317 aa20.51■□□□□ 0.87
DDR1-246ENST00000485023 RTL9Q8NET4 1388 aa20.5■□□□□ 0.87
DDR1-246ENST00000485023 C6orf229H3BNL8 230 aa20.5■□□□□ 0.87
DDR1-246ENST00000485023 NIM1KQ8IY84 436 aa20.5■□□□□ 0.87
DDR1-246ENST00000485023 FRAT1Q92837 279 aaPredicted RBP20.5■□□□□ 0.87
DDR1-246ENST00000485023 SUCLG2Q96I99 432 aa20.5■□□□□ 0.87
DDR1-246ENST00000485023 RTFDC1Q9BY42 306 aaPredicted RBP20.5■□□□□ 0.87
DDR1-246ENST00000485023 RIMBP2O15034 1052 aa20.49■□□□□ 0.87
DDR1-246ENST00000485023 LMBR1LQ6UX01 489 aa20.49■□□□□ 0.87
DDR1-246ENST00000485023 API5Q9BZZ5 524 aaKnown RBP20.49■□□□□ 0.87
DDR1-246ENST00000485023 ANKIB1Q9P2G1 1089 aa20.49■□□□□ 0.87
DDR1-246ENST00000485023 UFL1O94874 794 aa20.48■□□□□ 0.87
DDR1-246ENST00000485023 CSF1RP07333 972 aa20.48■□□□□ 0.87
DDR1-246ENST00000485023 IGHMBP2P38935 993 aaKnown RBP20.48■□□□□ 0.87
DDR1-246ENST00000485023 POLLQ9UGP5 575 aa20.48■□□□□ 0.87
DDR1-246ENST00000485023 LTBP1Q14766 1721 aa20.47■□□□□ 0.87
DDR1-246ENST00000485023 ANKRD18BA2A2Z9 1011 aa20.47■□□□□ 0.87
DDR1-246ENST00000485023 FZD9O00144 591 aa20.47■□□□□ 0.87
DDR1-246ENST00000485023 BRPF1P55201 1214 aaPredicted RBP20.47■□□□□ 0.87
DDR1-246ENST00000485023 KIAA2012Q0VF49 1180 aa20.47■□□□□ 0.87
DDR1-246ENST00000485023 C16orf71Q8IYS4 520 aaPredicted RBP20.47■□□□□ 0.87
DDR1-246ENST00000485023 TBC1D16Q8TBP0 767 aa20.47■□□□□ 0.87
DDR1-246ENST00000485023 TNNQ9UQP3 1299 aa20.47■□□□□ 0.87
DDR1-246ENST00000485023 GJA3Q9Y6H8 435 aa20.47■□□□□ 0.87
DDR1-246ENST00000485023 EIF6P56537 245 aaKnown RBP20.46■□□□□ 0.87
DDR1-246ENST00000485023 WDR90Q96KV7 1748 aa20.45■□□□□ 0.86
DDR1-246ENST00000485023 CCT4P50991 539 aaKnown RBP20.45■□□□□ 0.86
DDR1-246ENST00000485023 IFIT5Q13325 482 aaKnown RBP20.45■□□□□ 0.86
DDR1-246ENST00000485023 WASHC4Q2M389 1173 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms