RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 CA12O43570 354 aa11.54□□□□□ -0.56
DDX39B-221ENST00000484566 NUDT7P0C024 238 aa11.54□□□□□ -0.56
DDX39B-221ENST00000484566 IL13P35225 146 aa11.54□□□□□ -0.56
DDX39B-221ENST00000484566 CCDC93Q567U6 631 aa11.54□□□□□ -0.56
DDX39B-221ENST00000484566 LCE2DQ5TA82 110 aaPredicted RBP11.54□□□□□ -0.56
DDX39B-221ENST00000484566 MASTLQ96GX5 879 aa11.54□□□□□ -0.56
DDX39B-221ENST00000484566 CAPNS2Q96L46 248 aa11.54□□□□□ -0.56
DDX39B-221ENST00000484566 SETDB2Q96T68 719 aa11.54□□□□□ -0.56
DDX39B-221ENST00000484566 PANK3Q9H999 370 aa11.54□□□□□ -0.56
DDX39B-221ENST00000484566 HACL1Q9UJ83 578 aa11.54□□□□□ -0.56
DDX39B-221ENST00000484566 POTEMA6NI47 508 aa11.53□□□□□ -0.56
DDX39B-221ENST00000484566 SRGNP10124 158 aa11.53□□□□□ -0.56
DDX39B-221ENST00000484566 ECE1P42892 770 aa11.53□□□□□ -0.56
DDX39B-221ENST00000484566 PNMA8AQ86V59 439 aaPredicted RBP11.53□□□□□ -0.56
DDX39B-221ENST00000484566 ABT1Q9ULW3 272 aaKnown RBP11.53□□□□□ -0.56
DDX39B-221ENST00000484566 TBC1D2BQ9UPU7 963 aa11.53□□□□□ -0.56
DDX39B-221ENST00000484566 BCORQ6W2J9 1755 aa11.53□□□□□ -0.56
DDX39B-221ENST00000484566 ADAMTSL1Q8N6G6 1762 aa11.53□□□□□ -0.56
DDX39B-221ENST00000484566 HMOX1P09601 288 aa11.52□□□□□ -0.57
DDX39B-221ENST00000484566 EPHX2P34913 555 aa11.52□□□□□ -0.57
DDX39B-221ENST00000484566 IL6STP40189 918 aaPredicted RBP11.52□□□□□ -0.57
DDX39B-221ENST00000484566 POTEGQ6S5H5 508 aa11.52□□□□□ -0.57
DDX39B-221ENST00000484566 KHSRPQ92945 711 aaKnown RBP eCLIP11.52□□□□□ -0.57
DDX39B-221ENST00000484566 TEX13AQ9BXU3 409 aaPredicted RBP11.52□□□□□ -0.57
DDX39B-221ENST00000484566 EMILIN3Q9NT22 766 aa11.52□□□□□ -0.57
DDX39B-221ENST00000484566 ZNF541Q9H0D2 1346 aa11.52□□□□□ -0.57
DDX39B-221ENST00000484566 HEG1Q9ULI3 1381 aa11.52□□□□□ -0.57
DDX39B-221ENST00000484566 FAM205CA6NFA0 338 aa11.51□□□□□ -0.57
DDX39B-221ENST00000484566 MAP2K2P36507 400 aa11.51□□□□□ -0.57
DDX39B-221ENST00000484566 FKBP4Q02790 459 aaKnown RBP eCLIP11.51□□□□□ -0.57
DDX39B-221ENST00000484566 KNSTRNQ9Y448 316 aa11.51□□□□□ -0.57
DDX39B-221ENST00000484566 RNF123Q5XPI4 1314 aa11.51□□□□□ -0.57
DDX39B-221ENST00000484566 TEFQ10587 303 aa11.5□□□□□ -0.57
DDX39B-221ENST00000484566 MTHFSDQ2M296 383 aaKnown RBP11.5□□□□□ -0.57
DDX39B-221ENST00000484566 MAP1SQ66K74 1059 aaPredicted RBP11.5□□□□□ -0.57
DDX39B-221ENST00000484566 CYP4F22Q6NT55 531 aa11.5□□□□□ -0.57
DDX39B-221ENST00000484566 CNTROBQ8N137 903 aa11.5□□□□□ -0.57
DDX39B-221ENST00000484566 ZNF496Q96IT1 587 aaPredicted RBP11.5□□□□□ -0.57
DDX39B-221ENST00000484566 ZNF277Q9NRM2 450 aaPredicted RBP11.5□□□□□ -0.57
DDX39B-221ENST00000484566 EVI5O60447 810 aa11.49□□□□□ -0.57
DDX39B-221ENST00000484566 CAMTA2O94983 1202 aa11.49□□□□□ -0.57
DDX39B-221ENST00000484566 NPR1P16066 1061 aa11.49□□□□□ -0.57
DDX39B-221ENST00000484566 ZNF790Q6PG37 636 aa11.49□□□□□ -0.57
DDX39B-221ENST00000484566 NBPF5PQ86XG9 351 aaPredicted RBP11.49□□□□□ -0.57
DDX39B-221ENST00000484566 ZNF652Q9Y2D9 606 aa11.49□□□□□ -0.57
DDX39B-221ENST00000484566 TRPM7Q96QT4 1865 aa11.49□□□□□ -0.57
DDX39B-221ENST00000484566 DPYSL4O14531 572 aa11.48□□□□□ -0.57
DDX39B-221ENST00000484566 LMOD1P29536 600 aaPredicted RBP11.48□□□□□ -0.57
DDX39B-221ENST00000484566 DZIP3Q86Y13 1208 aaKnown RBP11.48□□□□□ -0.57
DDX39B-221ENST00000484566 RTKN2Q8IZC4 609 aa11.48□□□□□ -0.57
DDX39B-221ENST00000484566 C7orf43Q8WVR3 580 aa11.48□□□□□ -0.57
DDX39B-221ENST00000484566 FMNL2Q96PY5 1086 aa11.48□□□□□ -0.57
DDX39B-221ENST00000484566 TIMELESSQ9UNS1 1208 aa11.48□□□□□ -0.57
DDX39B-221ENST00000484566 SIPA1L3O60292 1781 aaPredicted RBP11.48□□□□□ -0.57
DDX39B-221ENST00000484566 AOC2O75106 756 aa11.47□□□□□ -0.57
DDX39B-221ENST00000484566 IARSP41252 1262 aaKnown RBP11.47□□□□□ -0.57
DDX39B-221ENST00000484566 EIF4G2P78344 907 aaKnown RBP eCLIP11.47□□□□□ -0.57
DDX39B-221ENST00000484566 GRM1Q13255 1194 aa11.47□□□□□ -0.57
DDX39B-221ENST00000484566 GPC2Q8N158 579 aa11.47□□□□□ -0.57
DDX39B-221ENST00000484566 JDP2Q8WYK2 163 aa11.47□□□□□ -0.57
DDX39B-221ENST00000484566 DDX21Q9NR30 783 aaKnown RBP eCLIP11.47□□□□□ -0.57
DDX39B-221ENST00000484566 SPDYE16A6NNV3 312 aaPredicted RBP11.46□□□□□ -0.57
DDX39B-221ENST00000484566 FZD9O00144 591 aa11.46□□□□□ -0.57
DDX39B-221ENST00000484566 CLEC4GQ6UXB4 293 aa11.46□□□□□ -0.57
DDX39B-221ENST00000484566 GAS2L2Q8NHY3 880 aa11.46□□□□□ -0.57
DDX39B-221ENST00000484566 LHX6Q9UPM6 363 aa11.46□□□□□ -0.57
DDX39B-221ENST00000484566 ARIH1Q9Y4X5 557 aaPredicted RBP11.46□□□□□ -0.57
DDX39B-221ENST00000484566 TRIOBPQ9H2D6 2365 aa11.46□□□□□ -0.58
DDX39B-221ENST00000484566 GNAT3A8MTJ3 354 aa11.45□□□□□ -0.58
DDX39B-221ENST00000484566 DIAPH1O60610 1272 aaKnown RBP11.45□□□□□ -0.58
DDX39B-221ENST00000484566 A1BGP04217 495 aa11.45□□□□□ -0.58
DDX39B-221ENST00000484566 EIF6P56537 245 aaKnown RBP11.45□□□□□ -0.58
DDX39B-221ENST00000484566 TPTE2Q6XPS3 522 aa11.45□□□□□ -0.58
DDX39B-221ENST00000484566 HS3ST6Q96QI5 342 aa11.45□□□□□ -0.58
DDX39B-221ENST00000484566 ALDH1B1P30837 517 aa11.44□□□□□ -0.58
DDX39B-221ENST00000484566 VARS2Q5ST30 1063 aaKnown RBP11.44□□□□□ -0.58
DDX39B-221ENST00000484566 OLFM4Q6UX06 510 aa11.44□□□□□ -0.58
DDX39B-221ENST00000484566 SYNE4Q8N205 404 aa11.44□□□□□ -0.58
DDX39B-221ENST00000484566 GJA3Q9Y6H8 435 aa11.44□□□□□ -0.58
DDX39B-221ENST00000484566 KLRG2A4D1S0 409 aaPredicted RBP11.43□□□□□ -0.58
DDX39B-221ENST00000484566 HSPA5P11021 654 aaKnown RBP11.43□□□□□ -0.58
DDX39B-221ENST00000484566 GTF2E1P29083 439 aaPredicted RBP11.43□□□□□ -0.58
DDX39B-221ENST00000484566 BRPF1P55201 1214 aaPredicted RBP11.43□□□□□ -0.58
DDX39B-221ENST00000484566 PSMD1Q99460 953 aa11.43□□□□□ -0.58
DDX39B-221ENST00000484566 NIP7Q9Y221 180 aaKnown RBP eCLIP11.43□□□□□ -0.58
DDX39B-221ENST00000484566 BTBD11A6QL63 1104 aa11.42□□□□□ -0.58
DDX39B-221ENST00000484566 PIP4K2AP48426 406 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-221ENST00000484566 CC2D2BQ6DHV5 1058 aa11.42□□□□□ -0.58
DDX39B-221ENST00000484566 IL17REQ8NFR9 667 aa11.42□□□□□ -0.58
DDX39B-221ENST00000484566 FAM177BA6PVY3 158 aa11.41□□□□□ -0.58
DDX39B-221ENST00000484566 U2SURPO15042 1029 aaKnown RBP11.41□□□□□ -0.58
DDX39B-221ENST00000484566 USP50Q70EL3 339 aaPredicted RBP11.41□□□□□ -0.58
DDX39B-221ENST00000484566 LARGE2Q8N3Y3 721 aa11.41□□□□□ -0.58
DDX39B-221ENST00000484566 TLL2Q9Y6L7 1015 aa11.41□□□□□ -0.58
DDX39B-221ENST00000484566 CEMIPQ8WUJ3 1361 aa11.41□□□□□ -0.58
DDX39B-221ENST00000484566 UNC80Q8N2C7 3258 aa11.4□□□□□ -0.58
DDX39B-221ENST00000484566 SCNN1DP51172 638 aa11.4□□□□□ -0.58
DDX39B-221ENST00000484566 PPP4R3BQ5MIZ7 849 aa11.4□□□□□ -0.58
DDX39B-221ENST00000484566 KCNV2Q8TDN2 545 aa11.4□□□□□ -0.58
DDX39B-221ENST00000484566 USP16Q9Y5T5 823 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms