RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SP8Q8IXZ3 490 aa16.53■□□□□ 0.24
HDAC1-209ENST00000484305 C16orf71Q8IYS4 520 aaPredicted RBP16.53■□□□□ 0.24
HDAC1-209ENST00000484305 GRAPLQ8TC17 118 aaPredicted RBP16.53■□□□□ 0.24
HDAC1-209ENST00000484305 COL4A5P29400 1685 aa16.53■□□□□ 0.24
HDAC1-209ENST00000484305 CWF19L2Q2TBE0 894 aaKnown RBP16.52■□□□□ 0.24
HDAC1-209ENST00000484305 TMX4Q9H1E5 349 aaPredicted RBP16.52■□□□□ 0.24
HDAC1-209ENST00000484305 ZNF541Q9H0D2 1346 aa16.51■□□□□ 0.23
HDAC1-209ENST00000484305 NEXNQ0ZGT2 675 aa16.51■□□□□ 0.23
HDAC1-209ENST00000484305 FKBP5Q13451 457 aaPredicted RBP16.51■□□□□ 0.23
HDAC1-209ENST00000484305 RBM46Q8TBY0 533 aaKnown RBP16.51■□□□□ 0.23
HDAC1-209ENST00000484305 CELF1Q92879 486 aaKnown RBP16.51■□□□□ 0.23
HDAC1-209ENST00000484305 LRRC37AA6NMS7 1700 aa16.5■□□□□ 0.23
HDAC1-209ENST00000484305 NEURL1BA8MQ27 555 aa16.5■□□□□ 0.23
HDAC1-209ENST00000484305 FZD9O00144 591 aa16.5■□□□□ 0.23
HDAC1-209ENST00000484305 CDHR2Q9BYE9 1310 aa16.49■□□□□ 0.23
HDAC1-209ENST00000484305 MYH3P11055 1940 aa16.49■□□□□ 0.23
HDAC1-209ENST00000484305 PDE8AO60658 829 aa16.49■□□□□ 0.23
HDAC1-209ENST00000484305 HSP90B1P14625 803 aaKnown RBP16.49■□□□□ 0.23
HDAC1-209ENST00000484305 HSPA6P17066 643 aa16.49■□□□□ 0.23
HDAC1-209ENST00000484305 LARGE2Q8N3Y3 721 aa16.49■□□□□ 0.23
HDAC1-209ENST00000484305 MPNDQ8N594 471 aa16.49■□□□□ 0.23
HDAC1-209ENST00000484305 DNAAF4Q8WXU2 420 aa16.49■□□□□ 0.23
HDAC1-209ENST00000484305 JDP2Q8WYK2 163 aa16.49■□□□□ 0.23
HDAC1-209ENST00000484305 RTFDC1Q9BY42 306 aaPredicted RBP16.49■□□□□ 0.23
HDAC1-209ENST00000484305 SEC31BQ9NQW1 1179 aa16.49■□□□□ 0.23
HDAC1-209ENST00000484305 AOC3Q16853 763 aa16.48■□□□□ 0.23
HDAC1-209ENST00000484305 DPP8Q6V1X1 898 aaPredicted RBP16.48■□□□□ 0.23
HDAC1-209ENST00000484305 TMC4Q7Z404 712 aa16.48■□□□□ 0.23
HDAC1-209ENST00000484305 SCN4AP35499 1836 aa16.47■□□□□ 0.23
HDAC1-209ENST00000484305 E9PSI1 815 aa16.47■□□□□ 0.23
HDAC1-209ENST00000484305 F6X3S4 739 aa16.47■□□□□ 0.23
HDAC1-209ENST00000484305 PPIP5K2O43314 1243 aa16.47■□□□□ 0.23
HDAC1-209ENST00000484305 RPS8P62241 208 aaKnown RBP16.47■□□□□ 0.23
HDAC1-209ENST00000484305 SLFN5Q08AF3 891 aa16.47■□□□□ 0.23
HDAC1-209ENST00000484305 SUPT20HQ8NEM7 779 aa16.47■□□□□ 0.23
HDAC1-209ENST00000484305 CDCA7LQ96GN5 454 aa16.47■□□□□ 0.23
HDAC1-209ENST00000484305 L3MBTL3Q96JM7 780 aaPredicted RBP16.47■□□□□ 0.23
HDAC1-209ENST00000484305 CCDC85AQ96PX6 553 aaPredicted RBP16.47■□□□□ 0.23
HDAC1-209ENST00000484305 DUOX1Q9NRD9 1551 aa16.47■□□□□ 0.23
HDAC1-209ENST00000484305 H7C1W4 665 aa16.46■□□□□ 0.23
HDAC1-209ENST00000484305 FSTL1Q12841 308 aa16.46■□□□□ 0.23
HDAC1-209ENST00000484305 GCKRQ14397 625 aa16.46■□□□□ 0.23
HDAC1-209ENST00000484305 CCDC152Q4G0S7 254 aa16.46■□□□□ 0.23
HDAC1-209ENST00000484305 DIEXFQ68CQ4 756 aaKnown RBP16.46■□□□□ 0.23
HDAC1-209ENST00000484305 UBE3BQ7Z3V4 1068 aa16.46■□□□□ 0.23
HDAC1-209ENST00000484305 LINS1Q8NG48 757 aa16.46■□□□□ 0.23
HDAC1-209ENST00000484305 VPS33BQ9H267 617 aa16.46■□□□□ 0.23
HDAC1-209ENST00000484305 CTSWP56202 376 aa16.45■□□□□ 0.22
HDAC1-209ENST00000484305 EIF6P56537 245 aaKnown RBP16.45■□□□□ 0.22
HDAC1-209ENST00000484305 NIM1KQ8IY84 436 aa16.45■□□□□ 0.22
HDAC1-209ENST00000484305 MIER1Q8N108 512 aa16.45■□□□□ 0.22
HDAC1-209ENST00000484305 SMC1BQ8NDV3 1235 aa16.45■□□□□ 0.22
HDAC1-209ENST00000484305 NSFL1CQ9UNZ2 370 aaKnown RBP16.45■□□□□ 0.22
HDAC1-209ENST00000484305 LTBP1Q14766 1721 aa16.45■□□□□ 0.22
HDAC1-209ENST00000484305 GPSM2P81274 684 aa16.44■□□□□ 0.22
HDAC1-209ENST00000484305 KIAA2012Q0VF49 1180 aa16.44■□□□□ 0.22
HDAC1-209ENST00000484305 GPC2Q8N158 579 aa16.44■□□□□ 0.22
HDAC1-209ENST00000484305 TTLL11Q8NHH1 800 aa16.44■□□□□ 0.22
HDAC1-209ENST00000484305 SPEF2Q9C093 1822 aa16.44■□□□□ 0.22
HDAC1-209ENST00000484305 IQCA1LA6NCM1 817 aa16.43■□□□□ 0.22
HDAC1-209ENST00000484305 POTEIP0CG38 1075 aa16.43■□□□□ 0.22
HDAC1-209ENST00000484305 POTEJP0CG39 1038 aa16.43■□□□□ 0.22
HDAC1-209ENST00000484305 CASP7P55210 303 aa16.43■□□□□ 0.22
HDAC1-209ENST00000484305 BEND3Q5T5X7 828 aa16.43■□□□□ 0.22
HDAC1-209ENST00000484305 POLLQ9UGP5 575 aa16.43■□□□□ 0.22
HDAC1-209ENST00000484305 GJA3Q9Y6H8 435 aa16.43■□□□□ 0.22
HDAC1-209ENST00000484305 CEP350Q5VT06 3117 aa16.42■□□□□ 0.22
HDAC1-209ENST00000484305 APLP1P51693 650 aa16.42■□□□□ 0.22
HDAC1-209ENST00000484305 TRMT2AQ8IZ69 625 aaKnown RBP16.42■□□□□ 0.22
HDAC1-209ENST00000484305 MRPL50Q8N5N7 158 aaKnown RBP16.42■□□□□ 0.22
HDAC1-209ENST00000484305 TAF1DQ9H5J8 278 aaPredicted RBP16.42■□□□□ 0.22
HDAC1-209ENST00000484305 GREM2Q9H772 168 aa16.42■□□□□ 0.22
HDAC1-209ENST00000484305 HACL1Q9UJ83 578 aa16.42■□□□□ 0.22
HDAC1-209ENST00000484305 ZNRF3Q9ULT6 936 aa16.42■□□□□ 0.22
HDAC1-209ENST00000484305 WASHC4Q2M389 1173 aa16.41■□□□□ 0.22
HDAC1-209ENST00000484305 ANKRD18AQ8IVF6 992 aa16.41■□□□□ 0.22
HDAC1-209ENST00000484305 PLA2G12BQ9BX93 195 aa16.41■□□□□ 0.22
HDAC1-209ENST00000484305 C6orf229H3BNL8 230 aa16.4■□□□□ 0.22
HDAC1-209ENST00000484305 RIMBP2O15034 1052 aa16.4■□□□□ 0.22
HDAC1-209ENST00000484305 CXCL9Q07325 125 aa16.4■□□□□ 0.22
HDAC1-209ENST00000484305 TBC1D16Q8TBP0 767 aa16.4■□□□□ 0.22
HDAC1-209ENST00000484305 SSH1Q8WYL5 1049 aa16.4■□□□□ 0.22
HDAC1-209ENST00000484305 GPR101Q96P66 508 aaPredicted RBP16.4■□□□□ 0.22
HDAC1-209ENST00000484305 PODXL2Q9NZ53 605 aa16.4■□□□□ 0.22
HDAC1-209ENST00000484305 RTL9Q8NET4 1388 aa16.39■□□□□ 0.21
HDAC1-209ENST00000484305 YDJCA8MPS7 323 aa16.39■□□□□ 0.21
HDAC1-209ENST00000484305 EPHX2P34913 555 aa16.39■□□□□ 0.21
HDAC1-209ENST00000484305 SCNN1DP51172 638 aa16.39■□□□□ 0.21
HDAC1-209ENST00000484305 CHADLQ6NUI6 762 aa16.39■□□□□ 0.21
HDAC1-209ENST00000484305 SLC4A10Q6U841 1118 aa16.39■□□□□ 0.21
HDAC1-209ENST00000484305 CDC5LQ99459 802 aaKnown RBP16.39■□□□□ 0.21
HDAC1-209ENST00000484305 ANKIB1Q9P2G1 1089 aa16.39■□□□□ 0.21
HDAC1-209ENST00000484305 CSF1RP07333 972 aa16.38■□□□□ 0.21
HDAC1-209ENST00000484305 HTRA3P83110 453 aa16.38■□□□□ 0.21
HDAC1-209ENST00000484305 EAPPQ56P03 285 aaPredicted RBP16.38■□□□□ 0.21
HDAC1-209ENST00000484305 BCL2L13Q9BXK5 485 aa16.38■□□□□ 0.21
HDAC1-209ENST00000484305 ADAMTSL1Q8N6G6 1762 aa16.38■□□□□ 0.21
HDAC1-209ENST00000484305 RAD17O75943 681 aa16.37■□□□□ 0.21
HDAC1-209ENST00000484305 UFL1O94874 794 aa16.37■□□□□ 0.21
HDAC1-209ENST00000484305 ITGA6P23229 1130 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms