RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 RASSF7Q02833 373 aa33.8■■■■□ 3
SMDT1-203ENST00000484235 DNAJC5GQ8N7S2 189 aa33.8■■■■□ 3
SMDT1-203ENST00000484235 ALDH1L1O75891 902 aa33.79■■■■□ 3
SMDT1-203ENST00000484235 LMNB1P20700 586 aa33.79■■■■□ 3
SMDT1-203ENST00000484235 GRAPQ13588 217 aa33.79■■■■□ 3
SMDT1-203ENST00000484235 OLFM4Q6UX06 510 aa33.79■■■■□ 3
SMDT1-203ENST00000484235 GRAPLQ8TC17 118 aaPredicted RBP33.79■■■■□ 3
SMDT1-203ENST00000484235 SRCIN1Q9C0H9 1055 aa33.79■■■■□ 3
SMDT1-203ENST00000484235 DDX60Q8IY21 1712 aaKnown RBP33.79■■■■□ 3
SMDT1-203ENST00000484235 LTBP3Q9NS15 1303 aa33.79■■■■□ 3
SMDT1-203ENST00000484235 GRIPAP1Q4V328 841 aa33.78■■■■□ 3
SMDT1-203ENST00000484235 TAOK3Q9H2K8 898 aa33.78■■■■□ 3
SMDT1-203ENST00000484235 NOB1Q9ULX3 412 aaKnown RBP33.78■■■■□ 3
SMDT1-203ENST00000484235 CASP7P55210 303 aa33.77■■■■□ 3
SMDT1-203ENST00000484235 CCDC152Q4G0S7 254 aa33.77■■■■□ 3
SMDT1-203ENST00000484235 TMX4Q9H1E5 349 aaPredicted RBP33.77■■■■□ 3
SMDT1-203ENST00000484235 ATP6V0A2Q9Y487 856 aa33.77■■■■□ 3
SMDT1-203ENST00000484235 RNF181Q9P0P0 153 aa33.76■■■□□ 2.99
SMDT1-203ENST00000484235 TMC4Q7Z404 712 aa33.75■■■□□ 2.99
SMDT1-203ENST00000484235 RBM46Q8TBY0 533 aaKnown RBP33.75■■■□□ 2.99
SMDT1-203ENST00000484235 PLA2G12BQ9BX93 195 aa33.75■■■□□ 2.99
SMDT1-203ENST00000484235 LAMB2P55268 1798 aa33.75■■■□□ 2.99
SMDT1-203ENST00000484235 PRELPP51888 382 aa33.74■■■□□ 2.99
SMDT1-203ENST00000484235 CTSWP56202 376 aa33.74■■■□□ 2.99
SMDT1-203ENST00000484235 SP8Q8IXZ3 490 aa33.74■■■□□ 2.99
SMDT1-203ENST00000484235 CACNA1SQ13698 1873 aa33.73■■■□□ 2.99
SMDT1-203ENST00000484235 GRM8O00222 908 aa33.73■■■□□ 2.99
SMDT1-203ENST00000484235 FKBP4Q02790 459 aaKnown RBP eCLIP33.73■■■□□ 2.99
SMDT1-203ENST00000484235 TTLL11Q8NHH1 800 aa33.73■■■□□ 2.99
SMDT1-203ENST00000484235 C9orf78Q9NZ63 289 aaPredicted RBP33.73■■■□□ 2.99
SMDT1-203ENST00000484235 SBF1O95248 1867 aa33.72■■■□□ 2.99
SMDT1-203ENST00000484235 ARHGAP45Q92619 1136 aa33.72■■■□□ 2.99
SMDT1-203ENST00000484235 API5Q9BZZ5 524 aaKnown RBP33.72■■■□□ 2.99
SMDT1-203ENST00000484235 KIF16BQ96L93 1317 aa33.72■■■□□ 2.99
SMDT1-203ENST00000484235 RPS8P62241 208 aaKnown RBP33.71■■■□□ 2.99
SMDT1-203ENST00000484235 CELF1Q92879 486 aaKnown RBP33.71■■■□□ 2.99
SMDT1-203ENST00000484235 PSMD1Q99460 953 aa33.7■■■□□ 2.99
SMDT1-203ENST00000484235 SEC31BQ9NQW1 1179 aa33.7■■■□□ 2.99
SMDT1-203ENST00000484235 FER1L6Q2WGJ9 1857 aa33.69■■■□□ 2.98
SMDT1-203ENST00000484235 CCDC85AQ96PX6 553 aaPredicted RBP33.69■■■□□ 2.98
SMDT1-203ENST00000484235 KDM2BQ8NHM5 1336 aa33.69■■■□□ 2.98
SMDT1-203ENST00000484235 IPO8O15397 1037 aaKnown RBP33.68■■■□□ 2.98
SMDT1-203ENST00000484235 BCAR3O75815 825 aa33.68■■■□□ 2.98
SMDT1-203ENST00000484235 SNED1Q8TER0 1413 aa33.68■■■□□ 2.98
SMDT1-203ENST00000484235 CSF1RP07333 972 aa33.67■■■□□ 2.98
SMDT1-203ENST00000484235 RRAGCQ9HB90 399 aa33.67■■■□□ 2.98
SMDT1-203ENST00000484235 SLC51AQ86UW1 340 aa33.66■■■□□ 2.98
SMDT1-203ENST00000484235 RTL9Q8NET4 1388 aa33.66■■■□□ 2.98
SMDT1-203ENST00000484235 ZC3H4Q9UPT8 1303 aaKnown RBP33.66■■■□□ 2.98
SMDT1-203ENST00000484235 UTYO14607 1347 aa33.65■■■□□ 2.98
SMDT1-203ENST00000484235 CCT4P50991 539 aaKnown RBP33.65■■■□□ 2.98
SMDT1-203ENST00000484235 GREM2Q9H772 168 aa33.65■■■□□ 2.98
SMDT1-203ENST00000484235 ZNF277Q9NRM2 450 aaPredicted RBP33.65■■■□□ 2.98
SMDT1-203ENST00000484235 FOXO4P98177 505 aa33.64■■■□□ 2.98
SMDT1-203ENST00000484235 FSTL1Q12841 308 aa33.64■■■□□ 2.98
SMDT1-203ENST00000484235 CDC5LQ99459 802 aaKnown RBP33.64■■■□□ 2.98
SMDT1-203ENST00000484235 MPNDQ8N594 471 aa33.63■■■□□ 2.97
SMDT1-203ENST00000484235 NBPF7P0C2Y1 421 aaPredicted RBP33.62■■■□□ 2.97
SMDT1-203ENST00000484235 DPP8Q6V1X1 898 aaPredicted RBP33.62■■■□□ 2.97
SMDT1-203ENST00000484235 ANKRD18AQ8IVF6 992 aa33.62■■■□□ 2.97
SMDT1-203ENST00000484235 C16orf71Q8IYS4 520 aaPredicted RBP33.62■■■□□ 2.97
SMDT1-203ENST00000484235 FRAT1Q92837 279 aaPredicted RBP33.61■■■□□ 2.97
SMDT1-203ENST00000484235 RTFDC1Q9BY42 306 aaPredicted RBP33.61■■■□□ 2.97
SMDT1-203ENST00000484235 USP44Q9H0E7 712 aa33.61■■■□□ 2.97
SMDT1-203ENST00000484235 IARSP41252 1262 aaKnown RBP33.6■■■□□ 2.97
SMDT1-203ENST00000484235 SUPT20HQ8NEM7 779 aa33.6■■■□□ 2.97
SMDT1-203ENST00000484235 TAF1P21675 1872 aa33.59■■■□□ 2.97
SMDT1-203ENST00000484235 HTRA3P83110 453 aa33.59■■■□□ 2.97
SMDT1-203ENST00000484235 ATF7IPQ6VMQ6 1270 aa33.59■■■□□ 2.97
SMDT1-203ENST00000484235 VPS33BQ9H267 617 aa33.59■■■□□ 2.97
SMDT1-203ENST00000484235 ITGA6P23229 1130 aa33.58■■■□□ 2.97
SMDT1-203ENST00000484235 FAM161AQ3B820 660 aa33.58■■■□□ 2.97
SMDT1-203ENST00000484235 EPHA10Q5JZY3 1008 aa33.58■■■□□ 2.97
SMDT1-203ENST00000484235 TRIM27P14373 513 aa33.57■■■□□ 2.96
SMDT1-203ENST00000484235 LMBR1LQ6UX01 489 aa33.57■■■□□ 2.96
SMDT1-203ENST00000484235 NSFL1CQ9UNZ2 370 aaKnown RBP33.57■■■□□ 2.96
SMDT1-203ENST00000484235 WDR90Q96KV7 1748 aa33.56■■■□□ 2.96
SMDT1-203ENST00000484235 COL4A1P02462 1669 aa33.56■■■□□ 2.96
SMDT1-203ENST00000484235 GLTPD2A6NH11 291 aa33.56■■■□□ 2.96
SMDT1-203ENST00000484235 INTS3Q68E01 1043 aaKnown RBP33.56■■■□□ 2.96
SMDT1-203ENST00000484235 SUCLG2Q96I99 432 aa33.56■■■□□ 2.96
SMDT1-203ENST00000484235 BSDC1Q9NW68 430 aaPredicted RBP33.56■■■□□ 2.96
SMDT1-203ENST00000484235 IFIT5Q13325 482 aaKnown RBP33.55■■■□□ 2.96
SMDT1-203ENST00000484235 ZKSCAN2Q63HK3 967 aa33.55■■■□□ 2.96
SMDT1-203ENST00000484235 KAZALD1Q96I82 304 aa33.55■■■□□ 2.96
SMDT1-203ENST00000484235 MYH3P11055 1940 aa33.54■■■□□ 2.96
SMDT1-203ENST00000484235 ANKRD18BA2A2Z9 1011 aa33.54■■■□□ 2.96
SMDT1-203ENST00000484235 IGHMBP2P38935 993 aaKnown RBP33.54■■■□□ 2.96
SMDT1-203ENST00000484235 GPSM2P81274 684 aa33.54■■■□□ 2.96
SMDT1-203ENST00000484235 JDP2Q8WYK2 163 aa33.54■■■□□ 2.96
SMDT1-203ENST00000484235 CHMP3Q9Y3E7 222 aa33.54■■■□□ 2.96
SMDT1-203ENST00000484235 DPY19L2Q6NUT2 758 aa33.53■■■□□ 2.96
SMDT1-203ENST00000484235 KLRG1Q96E93 195 aa33.53■■■□□ 2.96
SMDT1-203ENST00000484235 PODXL2Q9NZ53 605 aa33.53■■■□□ 2.96
SMDT1-203ENST00000484235 CCDC88AQ3V6T2 1871 aa33.52■■■□□ 2.96
SMDT1-203ENST00000484235 LARGE2Q8N3Y3 721 aa33.52■■■□□ 2.96
SMDT1-203ENST00000484235 ANKIB1Q9P2G1 1089 aa33.52■■■□□ 2.96
SMDT1-203ENST00000484235 PPIP5K2O43314 1243 aa33.51■■■□□ 2.95
SMDT1-203ENST00000484235 CCDC57Q2TAC2 916 aa33.51■■■□□ 2.95
SMDT1-203ENST00000484235 JMYQ8N9B5 988 aa33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms