RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 KANK4Q5T7N3 995 aaPredicted RBP9.3□□□□□ -0.92
COMMD3-213ENST00000483684 DHX32Q7L7V1 743 aaKnown RBP9.3□□□□□ -0.92
COMMD3-213ENST00000483684 WFDC12Q8WWY7 111 aa9.3□□□□□ -0.92
COMMD3-213ENST00000483684 GLMNQ92990 594 aa9.3□□□□□ -0.92
COMMD3-213ENST00000483684 IFT43Q96FT9 208 aa9.3□□□□□ -0.92
COMMD3-213ENST00000483684 HINFPQ9BQA5 517 aa9.3□□□□□ -0.92
COMMD3-213ENST00000483684 LARP1Q6PKG0 1096 aaKnown RBP9.29□□□□□ -0.92
COMMD3-213ENST00000483684 KLK14Q9P0G3 267 aa9.29□□□□□ -0.92
COMMD3-213ENST00000483684 NOS3P29474 1203 aa9.28□□□□□ -0.92
COMMD3-213ENST00000483684 GPLD1P80108 840 aa9.28□□□□□ -0.92
COMMD3-213ENST00000483684 DPYDQ12882 1025 aa9.28□□□□□ -0.92
COMMD3-213ENST00000483684 QTRT2Q9H974 415 aaKnown RBP9.28□□□□□ -0.92
COMMD3-213ENST00000483684 LGR5O75473 907 aa9.27□□□□□ -0.93
COMMD3-213ENST00000483684 TARSP26639 723 aaKnown RBP9.27□□□□□ -0.93
COMMD3-213ENST00000483684 ARSDP51689 593 aa9.27□□□□□ -0.93
COMMD3-213ENST00000483684 IGF2-ASQ6U949 168 aa9.27□□□□□ -0.93
COMMD3-213ENST00000483684 FAM196BA6NMK8 535 aa9.26□□□□□ -0.93
COMMD3-213ENST00000483684 IREB2P48200 963 aaKnown RBP9.26□□□□□ -0.93
COMMD3-213ENST00000483684 ELMSAN1Q6PJG2 1045 aa9.26□□□□□ -0.93
COMMD3-213ENST00000483684 KRT25Q7Z3Z0 450 aa9.26□□□□□ -0.93
COMMD3-213ENST00000483684 WFDC8Q8IUA0 241 aa9.26□□□□□ -0.93
COMMD3-213ENST00000483684 MEGF10Q96KG7 1140 aa9.26□□□□□ -0.93
COMMD3-213ENST00000483684 RNF112Q9ULX5 631 aa9.26□□□□□ -0.93
COMMD3-213ENST00000483684 DEAF1O75398 565 aaPredicted RBP9.25□□□□□ -0.93
COMMD3-213ENST00000483684 DGKZQ13574 1117 aa9.25□□□□□ -0.93
COMMD3-213ENST00000483684 ANKMY2Q8IV38 441 aa9.25□□□□□ -0.93
COMMD3-213ENST00000483684 MYO19Q96H55 970 aa9.25□□□□□ -0.93
COMMD3-213ENST00000483684 USP17L15C9J2P7 530 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 USP17L10C9JJH3 530 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 USP17L13C9JLJ4 530 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 USP17L12C9JPN9 530 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 USP17L11C9JVI0 530 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 USP17L21D6R901 530 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 USP17L18D6R9N7 530 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 USP17L22D6RA61 530 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 USP17L17D6RBQ6 530 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 USP17L19D6RCP7 530 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 USP17L20D6RJB6 530 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 SASH3O75995 380 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 MICAL2O94851 1124 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 RARAP10276 462 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 WEE1P30291 646 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 USP17L24Q0WX57 530 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 ARXQ96QS3 562 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 PPP1R12CQ9BZL4 782 aa9.24□□□□□ -0.93
COMMD3-213ENST00000483684 DLL1O00548 723 aa9.23□□□□□ -0.93
COMMD3-213ENST00000483684 FOXO3O43524 673 aa9.23□□□□□ -0.93
COMMD3-213ENST00000483684 EGFRP00533 1210 aa9.23□□□□□ -0.93
COMMD3-213ENST00000483684 NRLP54845 237 aa9.23□□□□□ -0.93
COMMD3-213ENST00000483684 MLLT1Q03111 559 aaPredicted RBP9.23□□□□□ -0.93
COMMD3-213ENST00000483684 C11orf91Q3C1V1 193 aa9.23□□□□□ -0.93
COMMD3-213ENST00000483684 PROSER2Q86WR7 435 aaPredicted RBP9.23□□□□□ -0.93
COMMD3-213ENST00000483684 CLUAP1Q96AJ1 413 aa9.23□□□□□ -0.93
COMMD3-213ENST00000483684 OPLAHO14841 1288 aa9.22□□□□□ -0.93
COMMD3-213ENST00000483684 PRR23CQ6ZRP0 262 aa9.22□□□□□ -0.93
COMMD3-213ENST00000483684 DZIP1LQ8IYY4 767 aaKnown RBP9.22□□□□□ -0.93
COMMD3-213ENST00000483684 SMG9Q9H0W8 520 aaKnown RBP9.22□□□□□ -0.93
COMMD3-213ENST00000483684 TLR7Q9NYK1 1049 aaKnown RBP9.21□□□□□ -0.94
COMMD3-213ENST00000483684 HFE2Q6ZVN8 426 aa9.2□□□□□ -0.94
COMMD3-213ENST00000483684 LRFN2Q9ULH4 789 aa9.2□□□□□ -0.94
COMMD3-213ENST00000483684 TMEM130Q8N3G9 435 aa9.19□□□□□ -0.94
COMMD3-213ENST00000483684 VRTNQ9H8Y1 702 aa9.19□□□□□ -0.94
COMMD3-213ENST00000483684 RTCBQ9Y3I0 505 aaKnown RBP9.19□□□□□ -0.94
COMMD3-213ENST00000483684 HOXD8P13378 290 aaPredicted RBP9.18□□□□□ -0.94
COMMD3-213ENST00000483684 ARID4AP29374 1257 aaPredicted RBP9.18□□□□□ -0.94
COMMD3-213ENST00000483684 SLC51AQ86UW1 340 aa9.18□□□□□ -0.94
COMMD3-213ENST00000483684 USP20Q9Y2K6 914 aa9.18□□□□□ -0.94
COMMD3-213ENST00000483684 EIF2AK2P19525 551 aaKnown RBP9.17□□□□□ -0.94
COMMD3-213ENST00000483684 TMEM132AQ24JP5 1023 aa9.17□□□□□ -0.94
COMMD3-213ENST00000483684 PLD4Q96BZ4 506 aa9.17□□□□□ -0.94
COMMD3-213ENST00000483684 AKTIPQ9H8T0 292 aa9.17□□□□□ -0.94
COMMD3-213ENST00000483684 LOC102724428A0A0B4J2F2 783 aa9.16□□□□□ -0.94
COMMD3-213ENST00000483684 SIK1P57059 783 aa9.16□□□□□ -0.94
COMMD3-213ENST00000483684 MRPL18Q9H0U6 180 aaKnown RBP9.16□□□□□ -0.94
COMMD3-213ENST00000483684 KCNMB2Q9Y691 235 aa9.16□□□□□ -0.94
COMMD3-213ENST00000483684 F8W735 103 aaPredicted RBP9.15□□□□□ -0.94
COMMD3-213ENST00000483684 J3QW42 95 aa9.15□□□□□ -0.94
COMMD3-213ENST00000483684 XYLBO75191 536 aa9.15□□□□□ -0.94
COMMD3-213ENST00000483684 ALX3O95076 343 aa9.15□□□□□ -0.94
COMMD3-213ENST00000483684 LMOD1P29536 600 aaPredicted RBP9.15□□□□□ -0.94
COMMD3-213ENST00000483684 Q6ZS46 218 aa9.15□□□□□ -0.94
COMMD3-213ENST00000483684 CALR3Q96L12 384 aaKnown RBP9.15□□□□□ -0.94
COMMD3-213ENST00000483684 SRA1Q9HD15 236 aaKnown RBP9.15□□□□□ -0.94
COMMD3-213ENST00000483684 MMP20O60882 483 aa9.14□□□□□ -0.95
COMMD3-213ENST00000483684 FSTP19883 344 aa9.14□□□□□ -0.95
COMMD3-213ENST00000483684 SOX18P35713 384 aa9.14□□□□□ -0.95
COMMD3-213ENST00000483684 TREML1Q86YW5 311 aa9.14□□□□□ -0.95
COMMD3-213ENST00000483684 VTI1AQ96AJ9 217 aa9.14□□□□□ -0.95
COMMD3-213ENST00000483684 GOLGA2P5Q9HBQ8 144 aa9.14□□□□□ -0.95
COMMD3-213ENST00000483684 PSAPP07602 524 aa9.13□□□□□ -0.95
COMMD3-213ENST00000483684 SETDB1Q15047 1291 aa9.13□□□□□ -0.95
COMMD3-213ENST00000483684 CMTR1Q8N1G2 835 aaKnown RBP9.13□□□□□ -0.95
COMMD3-213ENST00000483684 IL22RA1Q8N6P7 574 aa9.13□□□□□ -0.95
COMMD3-213ENST00000483684 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.13□□□□□ -0.95
COMMD3-213ENST00000483684 COX20Q5RI15 118 aa9.12□□□□□ -0.95
COMMD3-213ENST00000483684 MAP4K3Q8IVH8 894 aa9.12□□□□□ -0.95
COMMD3-213ENST00000483684 RGL4Q8IZJ4 473 aa9.12□□□□□ -0.95
COMMD3-213ENST00000483684 GHRHP01286 108 aa9.11□□□□□ -0.95
COMMD3-213ENST00000483684 GDF6Q6KF10 455 aaPredicted RBP9.11□□□□□ -0.95
COMMD3-213ENST00000483684 NSUN5Q96P11 429 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 734 ms