RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 RTKN2Q8IZC4 609 aa19.75■□□□□ 0.75
RPP40-206ENST00000483546 GRAPLQ8TC17 118 aaPredicted RBP19.75■□□□□ 0.75
RPP40-206ENST00000483546 TMX4Q9H1E5 349 aaPredicted RBP19.75■□□□□ 0.75
RPP40-206ENST00000483546 NOB1Q9ULX3 412 aaKnown RBP19.75■□□□□ 0.75
RPP40-206ENST00000483546 UTRNP46939 3433 aa19.74■□□□□ 0.75
RPP40-206ENST00000483546 RTL9Q8NET4 1388 aa19.74■□□□□ 0.75
RPP40-206ENST00000483546 GRM8O00222 908 aa19.74■□□□□ 0.75
RPP40-206ENST00000483546 PPEF1O14829 653 aaPredicted RBP19.74■□□□□ 0.75
RPP40-206ENST00000483546 YY1P25490 414 aa19.74■□□□□ 0.75
RPP40-206ENST00000483546 CASP7P55210 303 aa19.74■□□□□ 0.75
RPP40-206ENST00000483546 C9orf78Q9NZ63 289 aaPredicted RBP19.74■□□□□ 0.75
RPP40-206ENST00000483546 DICER1Q9UPY3 1922 aaKnown RBP19.74■□□□□ 0.75
RPP40-206ENST00000483546 CCDC88AQ3V6T2 1871 aa19.73■□□□□ 0.75
RPP40-206ENST00000483546 CCT4P50991 539 aaKnown RBP19.73■□□□□ 0.75
RPP40-206ENST00000483546 CTSWP56202 376 aa19.73■□□□□ 0.75
RPP40-206ENST00000483546 PIAS4Q8N2W9 510 aaPredicted RBP19.73■□□□□ 0.75
RPP40-206ENST00000483546 TAOK3Q9H2K8 898 aa19.73■□□□□ 0.75
RPP40-206ENST00000483546 LRRC37AA6NMS7 1700 aa19.73■□□□□ 0.75
RPP40-206ENST00000483546 TAF1P21675 1872 aa19.72■□□□□ 0.75
RPP40-206ENST00000483546 ATP6V0A2Q9Y487 856 aa19.72■□□□□ 0.75
RPP40-206ENST00000483546 UTYO14607 1347 aa19.72■□□□□ 0.75
RPP40-206ENST00000483546 SNED1Q8TER0 1413 aa19.71■□□□□ 0.75
RPP40-206ENST00000483546 NFKBIEO00221 500 aa19.71■□□□□ 0.75
RPP40-206ENST00000483546 LMNB1P20700 586 aa19.71■□□□□ 0.75
RPP40-206ENST00000483546 SP8Q8IXZ3 490 aa19.71■□□□□ 0.75
RPP40-206ENST00000483546 TTLL11Q8NHH1 800 aa19.71■□□□□ 0.75
RPP40-206ENST00000483546 JARID2Q92833 1246 aaPredicted RBP19.71■□□□□ 0.75
RPP40-206ENST00000483546 ZNF219Q9P2Y4 722 aaPredicted RBP19.71■□□□□ 0.75
RPP40-206ENST00000483546 ZC3H4Q9UPT8 1303 aaKnown RBP19.71■□□□□ 0.75
RPP40-206ENST00000483546 FKBP4Q02790 459 aaKnown RBP eCLIP19.7■□□□□ 0.74
RPP40-206ENST00000483546 CDC5LQ99459 802 aaKnown RBP19.7■□□□□ 0.74
RPP40-206ENST00000483546 PSMD1Q99460 953 aa19.7■□□□□ 0.74
RPP40-206ENST00000483546 BCAR3O75815 825 aa19.69■□□□□ 0.74
RPP40-206ENST00000483546 CSF1RP07333 972 aa19.69■□□□□ 0.74
RPP40-206ENST00000483546 RPS8P62241 208 aaKnown RBP19.69■□□□□ 0.74
RPP40-206ENST00000483546 ZKSCAN2Q63HK3 967 aa19.69■□□□□ 0.74
RPP40-206ENST00000483546 ATF7IPQ6VMQ6 1270 aa19.69■□□□□ 0.74
RPP40-206ENST00000483546 RASSF7Q02833 373 aa19.68■□□□□ 0.74
RPP40-206ENST00000483546 C9orf131Q5VYM1 1079 aa19.68■□□□□ 0.74
RPP40-206ENST00000483546 CELF1Q92879 486 aaKnown RBP19.68■□□□□ 0.74
RPP40-206ENST00000483546 HDAC5Q9UQL6 1122 aa19.68■□□□□ 0.74
RPP40-206ENST00000483546 INTS3Q68E01 1043 aaKnown RBP19.67■□□□□ 0.74
RPP40-206ENST00000483546 FRAT1Q92837 279 aaPredicted RBP19.67■□□□□ 0.74
RPP40-206ENST00000483546 RNF181Q9P0P0 153 aa19.67■□□□□ 0.74
RPP40-206ENST00000483546 TIAM2Q8IVF5 1701 aa19.67■□□□□ 0.74
RPP40-206ENST00000483546 TRIM27P14373 513 aa19.66■□□□□ 0.74
RPP40-206ENST00000483546 ANKRD18AQ8IVF6 992 aa19.66■□□□□ 0.74
RPP40-206ENST00000483546 SUPT20HQ8NEM7 779 aa19.66■□□□□ 0.74
RPP40-206ENST00000483546 VPS33BQ9H267 617 aa19.66■□□□□ 0.74
RPP40-206ENST00000483546 GREM2Q9H772 168 aa19.66■□□□□ 0.74
RPP40-206ENST00000483546 NBPF7P0C2Y1 421 aaPredicted RBP19.65■□□□□ 0.74
RPP40-206ENST00000483546 FOXO4P98177 505 aa19.65■□□□□ 0.74
RPP40-206ENST00000483546 USP44Q9H0E7 712 aa19.65■□□□□ 0.74
RPP40-206ENST00000483546 SEC31BQ9NQW1 1179 aa19.65■□□□□ 0.74
RPP40-206ENST00000483546 OLFM4Q6UX06 510 aa19.64■□□□□ 0.73
RPP40-206ENST00000483546 MPNDQ8N594 471 aa19.64■□□□□ 0.73
RPP40-206ENST00000483546 RTFDC1Q9BY42 306 aaPredicted RBP19.64■□□□□ 0.73
RPP40-206ENST00000483546 SPEF2Q9C093 1822 aa19.64■□□□□ 0.73
RPP40-206ENST00000483546 ITGA6P23229 1130 aa19.63■□□□□ 0.73
RPP40-206ENST00000483546 DPP8Q6V1X1 898 aaPredicted RBP19.63■□□□□ 0.73
RPP40-206ENST00000483546 CCDC85AQ96PX6 553 aaPredicted RBP19.63■□□□□ 0.73
RPP40-206ENST00000483546 RCAN3Q9UKA8 241 aa19.63■□□□□ 0.73
RPP40-206ENST00000483546 LTBP1Q14766 1721 aa19.62■□□□□ 0.73
RPP40-206ENST00000483546 COL4A1P02462 1669 aa19.62■□□□□ 0.73
RPP40-206ENST00000483546 ANKRD18BA2A2Z9 1011 aa19.62■□□□□ 0.73
RPP40-206ENST00000483546 MS4A1P11836 297 aa19.62■□□□□ 0.73
RPP40-206ENST00000483546 IGHMBP2P38935 993 aaKnown RBP19.62■□□□□ 0.73
RPP40-206ENST00000483546 IARSP41252 1262 aaKnown RBP19.62■□□□□ 0.73
RPP40-206ENST00000483546 PRELPP51888 382 aa19.62■□□□□ 0.73
RPP40-206ENST00000483546 IFIT5Q13325 482 aaKnown RBP19.62■□□□□ 0.73
RPP40-206ENST00000483546 FAM161AQ3B820 660 aa19.62■□□□□ 0.73
RPP40-206ENST00000483546 RABL6Q3YEC7 729 aaPredicted RBP19.62■□□□□ 0.73
RPP40-206ENST00000483546 LMBR1LQ6UX01 489 aa19.62■□□□□ 0.73
RPP40-206ENST00000483546 SUCLG2Q96I99 432 aa19.62■□□□□ 0.73
RPP40-206ENST00000483546 BSDC1Q9NW68 430 aaPredicted RBP19.62■□□□□ 0.73
RPP40-206ENST00000483546 UBTFL1P0CB47 393 aaPredicted RBP19.61■□□□□ 0.73
RPP40-206ENST00000483546 PODXL2Q9NZ53 605 aa19.61■□□□□ 0.73
RPP40-206ENST00000483546 GNAI3P08754 354 aa19.6■□□□□ 0.73
RPP40-206ENST00000483546 CCDC57Q2TAC2 916 aa19.6■□□□□ 0.73
RPP40-206ENST00000483546 EPHA10Q5JZY3 1008 aa19.6■□□□□ 0.73
RPP40-206ENST00000483546 FTSJ3Q8IY81 847 aaKnown RBP19.6■□□□□ 0.73
RPP40-206ENST00000483546 KAZALD1Q96I82 304 aa19.6■□□□□ 0.73
RPP40-206ENST00000483546 YTHDC1Q96MU7 727 aaKnown RBP19.6■□□□□ 0.73
RPP40-206ENST00000483546 ZNF277Q9NRM2 450 aaPredicted RBP19.6■□□□□ 0.73
RPP40-206ENST00000483546 CHMP3Q9Y3E7 222 aa19.6■□□□□ 0.73
RPP40-206ENST00000483546 DUOX1Q9NRD9 1551 aa19.6■□□□□ 0.73
RPP40-206ENST00000483546 DZIP1LQ8IYY4 767 aaKnown RBP19.59■□□□□ 0.73
RPP40-206ENST00000483546 ZNF784Q8NCA9 323 aaPredicted RBP19.59■□□□□ 0.73
RPP40-206ENST00000483546 JDP2Q8WYK2 163 aa19.59■□□□□ 0.73
RPP40-206ENST00000483546 MPHOSPH8Q99549 860 aa19.59■□□□□ 0.73
RPP40-206ENST00000483546 BICC1Q9H694 974 aaKnown RBP19.59■□□□□ 0.73
RPP40-206ENST00000483546 NSFL1CQ9UNZ2 370 aaKnown RBP19.59■□□□□ 0.73
RPP40-206ENST00000483546 XDHP47989 1333 aa19.58■□□□□ 0.73
RPP40-206ENST00000483546 CLUAP1Q96AJ1 413 aa19.58■□□□□ 0.72
RPP40-206ENST00000483546 KDM2BQ8NHM5 1336 aa19.57■□□□□ 0.72
RPP40-206ENST00000483546 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.57■□□□□ 0.72
RPP40-206ENST00000483546 EYA3Q99504 573 aa19.57■□□□□ 0.72
RPP40-206ENST00000483546 ANKIB1Q9P2G1 1089 aa19.57■□□□□ 0.72
RPP40-206ENST00000483546 PPIP5K2O43314 1243 aa19.56■□□□□ 0.72
RPP40-206ENST00000483546 GPSM2P81274 684 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms