RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 MAFGO15525 162 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 RWDD2BP57060 319 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 DHX8Q14562 1220 aaKnown RBP9.09□□□□□ -0.95
COL4A5-205ENST00000483338 MAP3K11Q16584 847 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 SKIDA1Q1XH10 827 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 TTC22Q5TAA0 569 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 PARD6BQ9BYG5 372 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 ATAD2Q6PL18 1390 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 MCM2P49736 904 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 RPS6KA3P51812 740 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 MRPL12P52815 198 aaKnown RBP9.09□□□□□ -0.95
COL4A5-205ENST00000483338 TRAF1Q13077 416 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 PREPLQ4J6C6 727 aaPredicted RBP9.09□□□□□ -0.95
COL4A5-205ENST00000483338 FBXO31Q5XUX0 539 aaPredicted RBP9.09□□□□□ -0.95
COL4A5-205ENST00000483338 WWC2Q6AWC2 1192 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 ISM2Q6H9L7 571 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 CKAP2LQ8IYA6 745 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 GPR161Q8N6U8 529 aaKnown RBP9.09□□□□□ -0.95
COL4A5-205ENST00000483338 CNNM3Q8NE01 707 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 MICAL1Q8TDZ2 1067 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 FAM107BQ9H098 131 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 SHANK2Q9UPX8 1470 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 ARHGEF5Q12774 1597 aa9.09□□□□□ -0.95
COL4A5-205ENST00000483338 ERC2O15083 957 aa9.09□□□□□ -0.96
COL4A5-205ENST00000483338 SNX1Q13596 522 aa9.09□□□□□ -0.96
COL4A5-205ENST00000483338 SAFB2Q14151 953 aaKnown RBP eCLIP9.09□□□□□ -0.96
COL4A5-205ENST00000483338 NUTM2DQ5VT03 806 aaPredicted RBP9.09□□□□□ -0.96
COL4A5-205ENST00000483338 TRIM74Q86UV6 250 aa9.09□□□□□ -0.96
COL4A5-205ENST00000483338 TRIM73Q86UV7 250 aa9.09□□□□□ -0.96
COL4A5-205ENST00000483338 ARMC2Q8NEN0 867 aa9.09□□□□□ -0.96
COL4A5-205ENST00000483338 PARD3BQ8TEW8 1205 aa9.09□□□□□ -0.96
COL4A5-205ENST00000483338 C1orf115Q9H7X2 142 aa9.09□□□□□ -0.96
COL4A5-205ENST00000483338 SPATS2LQ9NUQ6 558 aaKnown RBP9.09□□□□□ -0.96
COL4A5-205ENST00000483338 ODF2LQ9ULJ1 636 aa9.09□□□□□ -0.96
COL4A5-205ENST00000483338 SKAP2O75563 359 aaPredicted RBP9.08□□□□□ -0.96
COL4A5-205ENST00000483338 GNAI3P08754 354 aa9.08□□□□□ -0.96
COL4A5-205ENST00000483338 ZSCAN22P10073 491 aaPredicted RBP9.08□□□□□ -0.96
COL4A5-205ENST00000483338 CCDC27Q2M243 656 aa9.08□□□□□ -0.96
COL4A5-205ENST00000483338 CADPS2Q86UW7 1296 aa9.08□□□□□ -0.96
COL4A5-205ENST00000483338 HMGB1P09429 215 aaKnown RBP9.08□□□□□ -0.96
COL4A5-205ENST00000483338 ATP2B2Q01814 1243 aa9.08□□□□□ -0.96
COL4A5-205ENST00000483338 SIRT2Q8IXJ6 389 aa9.08□□□□□ -0.96
COL4A5-205ENST00000483338 TSR2Q969E8 191 aaKnown RBP9.08□□□□□ -0.96
COL4A5-205ENST00000483338 CABS1Q96KC9 395 aa9.08□□□□□ -0.96
COL4A5-205ENST00000483338 KIF9Q9HAQ2 790 aa9.08□□□□□ -0.96
COL4A5-205ENST00000483338 RTL1A6NKG5 1358 aa9.08□□□□□ -0.96
COL4A5-205ENST00000483338 MLH3Q9UHC1 1453 aa9.08□□□□□ -0.96
COL4A5-205ENST00000483338 MCM6Q14566 821 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 LRRFIP1Q32MZ4 808 aaKnown RBP9.07□□□□□ -0.96
COL4A5-205ENST00000483338 MRFAP1L1Q96HT8 127 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 DNAI1Q9UI46 699 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 MSH6P52701 1360 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 DUOX2Q9NRD8 1548 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 LAMC1P11047 1609 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 FRMD3A2A2Y4 597 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 ZNF165P49910 485 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 ICA1Q05084 483 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 NUP62CLQ9H1M0 184 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 FAM169AQ9Y6X4 670 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 NOS1P29475 1434 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 ADGBQ8N7X0 1667 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 ETF1P62495 437 aaKnown RBP9.07□□□□□ -0.96
COL4A5-205ENST00000483338 DNAJC25Q9H1X3 360 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 ADGRL2O95490 1459 aa9.07□□□□□ -0.96
COL4A5-205ENST00000483338 PPRC1Q5VV67 1664 aaKnown RBP9.07□□□□□ -0.96
COL4A5-205ENST00000483338 URI1O94763 535 aaPredicted RBP9.06□□□□□ -0.96
COL4A5-205ENST00000483338 SNUPNO95149 360 aaKnown RBP9.06□□□□□ -0.96
COL4A5-205ENST00000483338 SDSP20132 328 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 SLC5A9Q2M3M2 681 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 SARM1Q6SZW1 724 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 IQCA1Q86XH1 822 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 RUNDC1Q96C34 613 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 DDX11Q96FC9 970 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 CHMP3Q9Y3E7 222 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 PARP3Q9Y6F1 533 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 PHLPP2Q6ZVD8 1323 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 MAP3K4Q9Y6R4 1608 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 DNM1Q05193 864 aaKnown RBP9.06□□□□□ -0.96
COL4A5-205ENST00000483338 EXOSC9Q06265 439 aaKnown RBP9.06□□□□□ -0.96
COL4A5-205ENST00000483338 WLSQ5T9L3 541 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 VPS53Q5VIR6 699 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 ANKRD18AQ8IVF6 992 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 KIRREL3Q8IZU9 778 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 TTC41PQ6P2S7 1318 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 SHPRHQ149N8 1683 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 ZFYVE16Q7Z3T8 1539 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 MYO1FO00160 1098 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 CHUKO15111 745 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 PHACTR2O75167 634 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 F13A1P00488 732 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 RDXP35241 583 aaKnown RBP9.06□□□□□ -0.96
COL4A5-205ENST00000483338 GCKP35557 465 aa9.06□□□□□ -0.96
COL4A5-205ENST00000483338 GNL2Q13823 731 aaKnown RBP9.06□□□□□ -0.96
COL4A5-205ENST00000483338 RSRC2Q7L4I2 434 aaKnown RBP9.06□□□□□ -0.96
COL4A5-205ENST00000483338 C16orf71Q8IYS4 520 aaPredicted RBP9.06□□□□□ -0.96
COL4A5-205ENST00000483338 PSDA5PKW4 1024 aaPredicted RBP9.05□□□□□ -0.96
COL4A5-205ENST00000483338 ECEL1O95672 775 aa9.05□□□□□ -0.96
COL4A5-205ENST00000483338 TRIM65Q6PJ69 517 aa9.05□□□□□ -0.96
COL4A5-205ENST00000483338 ZBTB10Q96DT7 871 aa9.05□□□□□ -0.96
COL4A5-205ENST00000483338 PALD1Q9ULE6 856 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms