RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 RTL5Q5HYW3 569 aaPredicted RBP18.19■□□□□ 0.5
VARS-226ENST00000483275 CST9Q5W186 159 aa18.19■□□□□ 0.5
VARS-226ENST00000483275 CYP4F22Q6NT55 531 aa18.19■□□□□ 0.5
VARS-226ENST00000483275 ZNRF3Q9ULT6 936 aa18.19■□□□□ 0.5
VARS-226ENST00000483275 SH3TC1Q8TE82 1336 aa18.19■□□□□ 0.5
VARS-226ENST00000483275 ATP5J2-PTCD1G3V325 749 aa18.18■□□□□ 0.5
VARS-226ENST00000483275 CHL1O00533 1208 aa18.18■□□□□ 0.5
VARS-226ENST00000483275 HSPA8P11142 646 aaKnown RBP18.18■□□□□ 0.5
VARS-226ENST00000483275 HSP90AB3PQ58FF7 597 aa18.18■□□□□ 0.5
VARS-226ENST00000483275 HDGFL1Q5TGJ6 251 aa18.18■□□□□ 0.5
VARS-226ENST00000483275 USP50Q70EL3 339 aaPredicted RBP18.18■□□□□ 0.5
VARS-226ENST00000483275 DDX46Q7L014 1031 aaKnown RBP18.18■□□□□ 0.5
VARS-226ENST00000483275 MPNDQ8N594 471 aa18.18■□□□□ 0.5
VARS-226ENST00000483275 CAPNS2Q96L46 248 aa18.18■□□□□ 0.5
VARS-226ENST00000483275 RTFDC1Q9BY42 306 aaPredicted RBP18.18■□□□□ 0.5
VARS-226ENST00000483275 PRDM10Q9NQV6 1147 aa18.18■□□□□ 0.5
VARS-226ENST00000483275 BABAM1Q9NWV8 329 aa18.18■□□□□ 0.5
VARS-226ENST00000483275 YDJCA8MPS7 323 aa18.17■□□□□ 0.5
VARS-226ENST00000483275 GRAPQ13588 217 aa18.17■□□□□ 0.5
VARS-226ENST00000483275 SP8Q8IXZ3 490 aa18.17■□□□□ 0.5
VARS-226ENST00000483275 GRAPLQ8TC17 118 aaPredicted RBP18.17■□□□□ 0.5
VARS-226ENST00000483275 TRPM4Q8TD43 1214 aa18.17■□□□□ 0.5
VARS-226ENST00000483275 GLIS2Q9BZE0 524 aaPredicted RBP18.17■□□□□ 0.5
VARS-226ENST00000483275 ADARB2Q9NS39 739 aaKnown RBP18.17■□□□□ 0.5
VARS-226ENST00000483275 BBOX1O75936 387 aa18.16■□□□□ 0.5
VARS-226ENST00000483275 KIAA2012Q0VF49 1180 aa18.16■□□□□ 0.5
VARS-226ENST00000483275 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.5
VARS-226ENST00000483275 SUPT20HQ8NEM7 779 aa18.16■□□□□ 0.5
VARS-226ENST00000483275 RUNDC1Q96C34 613 aa18.16■□□□□ 0.5
VARS-226ENST00000483275 FAM89AQ96GI7 184 aa18.16■□□□□ 0.5
VARS-226ENST00000483275 GPR101Q96P66 508 aaPredicted RBP18.16■□□□□ 0.5
VARS-226ENST00000483275 TSKSQ9UJT2 592 aa18.16■□□□□ 0.5
VARS-226ENST00000483275 SCN9AQ15858 1988 aa18.15■□□□□ 0.5
VARS-226ENST00000483275 AOC2O75106 756 aa18.15■□□□□ 0.5
VARS-226ENST00000483275 CIAPIN1Q6FI81 312 aa18.15■□□□□ 0.5
VARS-226ENST00000483275 DLK2Q6UY11 383 aa18.15■□□□□ 0.5
VARS-226ENST00000483275 CELF1Q92879 486 aaKnown RBP18.15■□□□□ 0.5
VARS-226ENST00000483275 BCL2L13Q9BXK5 485 aa18.15■□□□□ 0.5
VARS-226ENST00000483275 ZNF408Q9H9D4 720 aa18.15■□□□□ 0.5
VARS-226ENST00000483275 POLR2AP24928 1970 aaKnown RBP18.15■□□□□ 0.5
VARS-226ENST00000483275 CELF2O95319 508 aaKnown RBP18.14■□□□□ 0.49
VARS-226ENST00000483275 HIRAP54198 1017 aaPredicted RBP18.14■□□□□ 0.49
VARS-226ENST00000483275 ADAMTS8Q9UP79 889 aa18.14■□□□□ 0.49
VARS-226ENST00000483275 SPEF2Q9C093 1822 aa18.14■□□□□ 0.49
VARS-226ENST00000483275 PLBD2Q8NHP8 589 aa18.13■□□□□ 0.49
VARS-226ENST00000483275 DBNDD1Q9H9R9 158 aa18.13■□□□□ 0.49
VARS-226ENST00000483275 ZBTB12Q9Y330 459 aaPredicted RBP18.13■□□□□ 0.49
VARS-226ENST00000483275 TLL2Q9Y6L7 1015 aa18.13■□□□□ 0.49
VARS-226ENST00000483275 RIMBP2O15034 1052 aa18.12■□□□□ 0.49
VARS-226ENST00000483275 MAP2K1Q02750 393 aaPredicted RBP18.12■□□□□ 0.49
VARS-226ENST00000483275 DUSP27Q5VZP5 1158 aa18.12■□□□□ 0.49
VARS-226ENST00000483275 ANKRD13DQ6ZTN6 518 aa18.12■□□□□ 0.49
VARS-226ENST00000483275 ISCA1Q9BUE6 129 aa18.12■□□□□ 0.49
VARS-226ENST00000483275 VPS33BQ9H267 617 aa18.12■□□□□ 0.49
VARS-226ENST00000483275 MBIPQ9NS73 344 aa18.12■□□□□ 0.49
VARS-226ENST00000483275 GPSM2P81274 684 aa18.11■□□□□ 0.49
VARS-226ENST00000483275 MICALL2Q8IY33 904 aa18.11■□□□□ 0.49
VARS-226ENST00000483275 CASP8AP2Q9UKL3 1982 aa18.1■□□□□ 0.49
VARS-226ENST00000483275 EGFRP00533 1210 aa18.1■□□□□ 0.49
VARS-226ENST00000483275 TNIP1Q15025 636 aa18.1■□□□□ 0.49
VARS-226ENST00000483275 JARID2Q92833 1246 aaPredicted RBP18.1■□□□□ 0.49
VARS-226ENST00000483275 KCNQ5Q9NR82 932 aa18.1■□□□□ 0.49
VARS-226ENST00000483275 DBF4Q9UBU7 674 aaPredicted RBP18.1■□□□□ 0.49
VARS-226ENST00000483275 CNOT7Q9UIV1 285 aaKnown RBP18.1■□□□□ 0.49
VARS-226ENST00000483275 NSFL1CQ9UNZ2 370 aaKnown RBP18.1■□□□□ 0.49
VARS-226ENST00000483275 C6orf229H3BNL8 230 aa18.09■□□□□ 0.49
VARS-226ENST00000483275 ELL2O00472 640 aaPredicted RBP18.09■□□□□ 0.49
VARS-226ENST00000483275 PSMD14O00487 310 aa18.09■□□□□ 0.49
VARS-226ENST00000483275 ECE1P42892 770 aa18.09■□□□□ 0.49
VARS-226ENST00000483275 DOK7Q18PE1 504 aa18.09■□□□□ 0.49
VARS-226ENST00000483275 SAMD7Q7Z3H4 446 aa18.09■□□□□ 0.49
VARS-226ENST00000483275 SAPCD2Q86UD0 394 aa18.09■□□□□ 0.49
VARS-226ENST00000483275 POLLQ9UGP5 575 aa18.09■□□□□ 0.49
VARS-226ENST00000483275 RTL9Q8NET4 1388 aa18.08■□□□□ 0.49
VARS-226ENST00000483275 CDHR2Q9BYE9 1310 aa18.08■□□□□ 0.49
VARS-226ENST00000483275 IRS4O14654 1257 aaPredicted RBP18.08■□□□□ 0.48
VARS-226ENST00000483275 WASHC4Q2M389 1173 aa18.08■□□□□ 0.48
VARS-226ENST00000483275 TBC1D10BQ4KMP7 808 aaPredicted RBP18.08■□□□□ 0.48
VARS-226ENST00000483275 ABHD8Q96I13 439 aa18.08■□□□□ 0.48
VARS-226ENST00000483275 CFAP44Q96MT7 982 aa18.08■□□□□ 0.48
VARS-226ENST00000483275 PHAXQ9H814 394 aaKnown RBP18.08■□□□□ 0.48
VARS-226ENST00000483275 HOXB7P09629 217 aa18.07■□□□□ 0.48
VARS-226ENST00000483275 SF3B3Q15393 1217 aaKnown RBP18.07■□□□□ 0.48
VARS-226ENST00000483275 USP48Q86UV5 1035 aa18.07■□□□□ 0.48
VARS-226ENST00000483275 CCDC85AQ96PX6 553 aaPredicted RBP18.07■□□□□ 0.48
VARS-226ENST00000483275 BEGAINQ9BUH8 593 aa18.07■□□□□ 0.48
VARS-226ENST00000483275 SEC31BQ9NQW1 1179 aa18.07■□□□□ 0.48
VARS-226ENST00000483275 HYPKQ9NX55 129 aa18.07■□□□□ 0.48
VARS-226ENST00000483275 PSME4Q14997 1843 aa18.07■□□□□ 0.48
VARS-226ENST00000483275 ECE2O60344 883 aa18.06■□□□□ 0.48
VARS-226ENST00000483275 RBM26Q5T8P6 1007 aaKnown RBP18.06■□□□□ 0.48
VARS-226ENST00000483275 TMC4Q7Z404 712 aa18.06■□□□□ 0.48
VARS-226ENST00000483275 RIC3Q7Z5B4 369 aa18.06■□□□□ 0.48
VARS-226ENST00000483275 MYD88Q99836 296 aa18.06■□□□□ 0.48
VARS-226ENST00000483275 PGAP2Q9UHJ9 254 aa18.06■□□□□ 0.48
VARS-226ENST00000483275 ADM5C9JUS6 153 aa18.05■□□□□ 0.48
VARS-226ENST00000483275 H7C1D1 291 aa18.05■□□□□ 0.48
VARS-226ENST00000483275 APAF1O14727 1248 aa18.05■□□□□ 0.48
VARS-226ENST00000483275 GOLGA2Q08379 1002 aa18.05■□□□□ 0.48
VARS-226ENST00000483275 ZIC5Q96T25 663 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms