RNA–Protein interactions for RNA: ENST00000483128.1

SHANK1-207, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 780 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-207ENST00000483128 DPP8Q6V1X1 898 aaPredicted RBP18.08■□□□□ 0.48
SHANK1-207ENST00000483128 NIM1KQ8IY84 436 aa18.08■□□□□ 0.48
SHANK1-207ENST00000483128 GPC2Q8N158 579 aa18.08■□□□□ 0.48
SHANK1-207ENST00000483128 MPNDQ8N594 471 aa18.08■□□□□ 0.48
SHANK1-207ENST00000483128 STK31Q9BXU1 1019 aa18.08■□□□□ 0.48
SHANK1-207ENST00000483128 HACL1Q9UJ83 578 aa18.08■□□□□ 0.48
SHANK1-207ENST00000483128 MAP3K2Q9Y2U5 619 aa18.08■□□□□ 0.48
SHANK1-207ENST00000483128 DDX60Q8IY21 1712 aaKnown RBP18.08■□□□□ 0.48
SHANK1-207ENST00000483128 SF3B3Q15393 1217 aaKnown RBP18.07■□□□□ 0.48
SHANK1-207ENST00000483128 ZBTB38Q8NAP3 1195 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-207ENST00000483128 CELF1Q92879 486 aaKnown RBP18.07■□□□□ 0.48
SHANK1-207ENST00000483128 METTL22Q9BUU2 404 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-207ENST00000483128 SCN4AP35499 1836 aa18.07■□□□□ 0.48
SHANK1-207ENST00000483128 EPHX2P34913 555 aa18.06■□□□□ 0.48
SHANK1-207ENST00000483128 NCBP3Q53F19 620 aaKnown RBP18.06■□□□□ 0.48
SHANK1-207ENST00000483128 CCDC191Q8NCU4 936 aa18.06■□□□□ 0.48
SHANK1-207ENST00000483128 SUPT20HQ8NEM7 779 aa18.06■□□□□ 0.48
SHANK1-207ENST00000483128 CWC25Q9NXE8 425 aaPredicted RBP18.06■□□□□ 0.48
SHANK1-207ENST00000483128 CLEC11AQ9Y240 323 aa18.06■□□□□ 0.48
SHANK1-207ENST00000483128 FANCIQ9NVI1 1328 aa18.05■□□□□ 0.48
SHANK1-207ENST00000483128 PI4KAP2A4QPH2 592 aa18.05■□□□□ 0.48
SHANK1-207ENST00000483128 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
SHANK1-207ENST00000483128 KSR2Q6VAB6 950 aa18.05■□□□□ 0.48
SHANK1-207ENST00000483128 G2E3Q7L622 706 aa18.05■□□□□ 0.48
SHANK1-207ENST00000483128 LDHDQ86WU2 507 aa18.05■□□□□ 0.48
SHANK1-207ENST00000483128 PI4KAP1Q8N8J0 262 aa18.05■□□□□ 0.48
SHANK1-207ENST00000483128 KLRG1Q96E93 195 aa18.05■□□□□ 0.48
SHANK1-207ENST00000483128 RTFDC1Q9BY42 306 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-207ENST00000483128 WDR63Q8IWG1 891 aa18.04■□□□□ 0.48
SHANK1-207ENST00000483128 CCDC85AQ96PX6 553 aaPredicted RBP18.04■□□□□ 0.48
SHANK1-207ENST00000483128 PCCAP05165 728 aaPredicted RBP18.03■□□□□ 0.48
SHANK1-207ENST00000483128 TMC4Q7Z404 712 aa18.03■□□□□ 0.48
SHANK1-207ENST00000483128 VPS33BQ9H267 617 aa18.03■□□□□ 0.48
SHANK1-207ENST00000483128 SEC31BQ9NQW1 1179 aa18.03■□□□□ 0.48
SHANK1-207ENST00000483128 NSFL1CQ9UNZ2 370 aaKnown RBP18.03■□□□□ 0.48
SHANK1-207ENST00000483128 LMOD1P29536 600 aaPredicted RBP18.02■□□□□ 0.48
SHANK1-207ENST00000483128 RPS8P62241 208 aaKnown RBP18.02■□□□□ 0.48
SHANK1-207ENST00000483128 EXOSC9Q06265 439 aaKnown RBP18.02■□□□□ 0.48
SHANK1-207ENST00000483128 SPINK5Q9NQ38 1064 aaPredicted RBP18.02■□□□□ 0.48
SHANK1-207ENST00000483128 ZNRF3Q9ULT6 936 aa18.02■□□□□ 0.48
SHANK1-207ENST00000483128 COL4A1P02462 1669 aa18.02■□□□□ 0.47
SHANK1-207ENST00000483128 PDE8AO60658 829 aa18.01■□□□□ 0.47
SHANK1-207ENST00000483128 IGKV5-2P06315 115 aa18.01■□□□□ 0.47
SHANK1-207ENST00000483128 HSP90B1P14625 803 aaKnown RBP18.01■□□□□ 0.47
SHANK1-207ENST00000483128 EPS15P42566 896 aa18.01■□□□□ 0.47
SHANK1-207ENST00000483128 SCNN1DP51172 638 aa18.01■□□□□ 0.47
SHANK1-207ENST00000483128 CXCL9Q07325 125 aa18.01■□□□□ 0.47
SHANK1-207ENST00000483128 KIAA2012Q0VF49 1180 aa18.01■□□□□ 0.47
SHANK1-207ENST00000483128 NEXNQ0ZGT2 675 aa18.01■□□□□ 0.47
SHANK1-207ENST00000483128 CWF19L2Q2TBE0 894 aaKnown RBP18.01■□□□□ 0.47
SHANK1-207ENST00000483128 PNMA8AQ86V59 439 aaPredicted RBP18.01■□□□□ 0.47
SHANK1-207ENST00000483128 VAMP4O75379 141 aa18■□□□□ 0.47
SHANK1-207ENST00000483128 GPSM2P81274 684 aa18■□□□□ 0.47
SHANK1-207ENST00000483128 CCDC152Q4G0S7 254 aa18■□□□□ 0.47
SHANK1-207ENST00000483128 MAP1SQ66K74 1059 aaPredicted RBP18■□□□□ 0.47
SHANK1-207ENST00000483128 C6orf229H3BNL8 230 aa17.99■□□□□ 0.47
SHANK1-207ENST00000483128 RIMBP2O15034 1052 aa17.99■□□□□ 0.47
SHANK1-207ENST00000483128 RAD17O75943 681 aa17.99■□□□□ 0.47
SHANK1-207ENST00000483128 FLIIQ13045 1269 aa17.99■□□□□ 0.47
SHANK1-207ENST00000483128 POLLQ9UGP5 575 aa17.99■□□□□ 0.47
SHANK1-207ENST00000483128 LTBP1Q14766 1721 aa17.98■□□□□ 0.47
SHANK1-207ENST00000483128 ITGBL1O95965 494 aaPredicted RBP17.98■□□□□ 0.47
SHANK1-207ENST00000483128 FKBP5Q13451 457 aaPredicted RBP17.98■□□□□ 0.47
SHANK1-207ENST00000483128 WASHC4Q2M389 1173 aa17.98■□□□□ 0.47
SHANK1-207ENST00000483128 CIAPIN1Q6FI81 312 aa17.98■□□□□ 0.47
SHANK1-207ENST00000483128 CNTROBQ8N137 903 aa17.98■□□□□ 0.47
SHANK1-207ENST00000483128 GPR101Q96P66 508 aaPredicted RBP17.98■□□□□ 0.47
SHANK1-207ENST00000483128 DUOX1Q9NRD9 1551 aa17.98■□□□□ 0.47
SHANK1-207ENST00000483128 LRRC37AA6NMS7 1700 aa17.98■□□□□ 0.47
SHANK1-207ENST00000483128 PASKQ96RG2 1323 aa17.98■□□□□ 0.47
SHANK1-207ENST00000483128 YDJCA8MPS7 323 aa17.97■□□□□ 0.47
SHANK1-207ENST00000483128 NEURL1BA8MQ27 555 aa17.97■□□□□ 0.47
SHANK1-207ENST00000483128 MYH16Q9H6N6 1097 aa17.97■□□□□ 0.47
SHANK1-207ENST00000483128 CREBZFQ9NS37 354 aa17.97■□□□□ 0.47
SHANK1-207ENST00000483128 CDHR2Q9BYE9 1310 aa17.97■□□□□ 0.47
SHANK1-207ENST00000483128 GMPSP49915 693 aaPredicted RBP17.96■□□□□ 0.47
SHANK1-207ENST00000483128 CTSWP56202 376 aa17.96■□□□□ 0.47
SHANK1-207ENST00000483128 UBE3BQ7Z3V4 1068 aa17.96■□□□□ 0.47
SHANK1-207ENST00000483128 JMYQ8N9B5 988 aa17.96■□□□□ 0.47
SHANK1-207ENST00000483128 BCL2L13Q9BXK5 485 aa17.96■□□□□ 0.47
SHANK1-207ENST00000483128 DBNDD1Q9H9R9 158 aa17.96■□□□□ 0.47
SHANK1-207ENST00000483128 GPRC5DQ9NZD1 345 aa17.96■□□□□ 0.47
SHANK1-207ENST00000483128 ANKIB1Q9P2G1 1089 aa17.96■□□□□ 0.47
SHANK1-207ENST00000483128 MKRN1Q9UHC7 482 aaKnown RBP17.96■□□□□ 0.47
SHANK1-207ENST00000483128 ADAMTSL1Q8N6G6 1762 aa17.95■□□□□ 0.46
SHANK1-207ENST00000483128 TNIP1Q15025 636 aa17.95■□□□□ 0.46
SHANK1-207ENST00000483128 DOK7Q18PE1 504 aa17.95■□□□□ 0.46
SHANK1-207ENST00000483128 ANKRD18AQ8IVF6 992 aa17.95■□□□□ 0.46
SHANK1-207ENST00000483128 TBC1D16Q8TBP0 767 aa17.95■□□□□ 0.46
SHANK1-207ENST00000483128 DNAAF4Q8WXU2 420 aa17.95■□□□□ 0.46
SHANK1-207ENST00000483128 USP50Q70EL3 339 aaPredicted RBP17.94■□□□□ 0.46
SHANK1-207ENST00000483128 TTLL11Q8NHH1 800 aa17.94■□□□□ 0.46
SHANK1-207ENST00000483128 EYA3Q99504 573 aa17.94■□□□□ 0.46
SHANK1-207ENST00000483128 F6X3S4 739 aa17.93■□□□□ 0.46
SHANK1-207ENST00000483128 H7C1W4 665 aa17.93■□□□□ 0.46
SHANK1-207ENST00000483128 UFL1O94874 794 aa17.93■□□□□ 0.46
SHANK1-207ENST00000483128 GCKRQ14397 625 aa17.93■□□□□ 0.46
SHANK1-207ENST00000483128 ZC3H12CQ9C0D7 883 aaKnown RBP17.93■□□□□ 0.46
SHANK1-207ENST00000483128 GREM2Q9H772 168 aa17.93■□□□□ 0.46
SHANK1-207ENST00000483128 KCNQ5Q9NR82 932 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms