RNA–Protein interactions for RNA: ENST00000482420.1

TMEM139-208, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-208ENST00000482420 TAF1P21675 1872 aa24.81■■□□□ 1.56
TMEM139-208ENST00000482420 VPS33BQ9H267 617 aa24.8■■□□□ 1.56
TMEM139-208ENST00000482420 GPRC5DQ9NZD1 345 aa24.8■■□□□ 1.56
TMEM139-208ENST00000482420 ATP5J2-PTCD1G3V325 749 aa24.79■■□□□ 1.56
TMEM139-208ENST00000482420 TRAF5O00463 557 aa24.79■■□□□ 1.56
TMEM139-208ENST00000482420 PLBD2Q8NHP8 589 aa24.79■■□□□ 1.56
TMEM139-208ENST00000482420 GMPSP49915 693 aaPredicted RBP24.78■■□□□ 1.56
TMEM139-208ENST00000482420 ANKRD13DQ6ZTN6 518 aa24.78■■□□□ 1.56
TMEM139-208ENST00000482420 PAXIP1Q6ZW49 1069 aaPredicted RBP24.78■■□□□ 1.56
TMEM139-208ENST00000482420 DBF4Q9UBU7 674 aaPredicted RBP24.78■■□□□ 1.56
TMEM139-208ENST00000482420 WDR33Q9C0J8 1336 aaKnown RBP24.78■■□□□ 1.56
TMEM139-208ENST00000482420 DDX60Q8IY21 1712 aaKnown RBP24.78■■□□□ 1.56
TMEM139-208ENST00000482420 RAD17O75943 681 aa24.77■■□□□ 1.56
TMEM139-208ENST00000482420 CTCFP49711 727 aaPredicted RBP24.77■■□□□ 1.56
TMEM139-208ENST00000482420 KIAA2012Q0VF49 1180 aa24.77■■□□□ 1.56
TMEM139-208ENST00000482420 GRM1Q13255 1194 aa24.77■■□□□ 1.56
TMEM139-208ENST00000482420 RTL5Q5HYW3 569 aaPredicted RBP24.77■■□□□ 1.56
TMEM139-208ENST00000482420 DUSP27Q5VZP5 1158 aa24.77■■□□□ 1.56
TMEM139-208ENST00000482420 FAM89AQ96GI7 184 aa24.77■■□□□ 1.56
TMEM139-208ENST00000482420 ADARB2Q9NS39 739 aaKnown RBP24.77■■□□□ 1.56
TMEM139-208ENST00000482420 HOXB7P09629 217 aa24.76■■□□□ 1.55
TMEM139-208ENST00000482420 CIAPIN1Q6FI81 312 aa24.76■■□□□ 1.55
TMEM139-208ENST00000482420 CFAP44Q96MT7 982 aa24.76■■□□□ 1.55
TMEM139-208ENST00000482420 MBIPQ9NS73 344 aa24.76■■□□□ 1.55
TMEM139-208ENST00000482420 WBP1LQ9NX94 342 aa24.76■■□□□ 1.55
TMEM139-208ENST00000482420 DUOX1Q9NRD9 1551 aa24.76■■□□□ 1.55
TMEM139-208ENST00000482420 BCL2L13Q9BXK5 485 aa24.75■■□□□ 1.55
TMEM139-208ENST00000482420 LBX1P52954 281 aa24.74■■□□□ 1.55
TMEM139-208ENST00000482420 ISCA1Q9BUE6 129 aa24.74■■□□□ 1.55
TMEM139-208ENST00000482420 PRDM10Q9NQV6 1147 aa24.74■■□□□ 1.55
TMEM139-208ENST00000482420 LRRC37AA6NMS7 1700 aa24.73■■□□□ 1.55
TMEM139-208ENST00000482420 CST9Q5W186 159 aa24.73■■□□□ 1.55
TMEM139-208ENST00000482420 CELF1Q92879 486 aaKnown RBP24.73■■□□□ 1.55
TMEM139-208ENST00000482420 HYPKQ9NX55 129 aa24.73■■□□□ 1.55
TMEM139-208ENST00000482420 YDJCA8MPS7 323 aa24.72■■□□□ 1.55
TMEM139-208ENST00000482420 CYP4F22Q6NT55 531 aa24.72■■□□□ 1.55
TMEM139-208ENST00000482420 TMC4Q7Z404 712 aa24.72■■□□□ 1.55
TMEM139-208ENST00000482420 CAPNS2Q96L46 248 aa24.72■■□□□ 1.55
TMEM139-208ENST00000482420 NSFL1CQ9UNZ2 370 aaKnown RBP24.72■■□□□ 1.55
TMEM139-208ENST00000482420 COL4A1P02462 1669 aa24.72■■□□□ 1.55
TMEM139-208ENST00000482420 TRPM7Q96QT4 1865 aa24.71■■□□□ 1.55
TMEM139-208ENST00000482420 SHTN1A0MZ66 631 aa24.71■■□□□ 1.55
TMEM139-208ENST00000482420 TNIP1Q15025 636 aa24.71■■□□□ 1.55
TMEM139-208ENST00000482420 ELL2O00472 640 aaPredicted RBP24.7■■□□□ 1.54
TMEM139-208ENST00000482420 MAP2K1Q02750 393 aaPredicted RBP24.7■■□□□ 1.54
TMEM139-208ENST00000482420 GLIS2Q9BZE0 524 aaPredicted RBP24.7■■□□□ 1.54
TMEM139-208ENST00000482420 PRKRIP1Q9H875 184 aaPredicted RBP24.7■■□□□ 1.54
TMEM139-208ENST00000482420 IRS4O14654 1257 aaPredicted RBP24.69■■□□□ 1.54
TMEM139-208ENST00000482420 APAF1O14727 1248 aa24.69■■□□□ 1.54
TMEM139-208ENST00000482420 RIMBP2O15034 1052 aa24.69■■□□□ 1.54
TMEM139-208ENST00000482420 CELF2O95319 508 aaKnown RBP24.69■■□□□ 1.54
TMEM139-208ENST00000482420 SF3B3Q15393 1217 aaKnown RBP24.69■■□□□ 1.54
TMEM139-208ENST00000482420 WASHC4Q2M389 1173 aa24.69■■□□□ 1.54
TMEM139-208ENST00000482420 RIC3Q7Z5B4 369 aa24.69■■□□□ 1.54
TMEM139-208ENST00000482420 TRPM4Q8TD43 1214 aa24.69■■□□□ 1.54
TMEM139-208ENST00000482420 DBNDD1Q9H9R9 158 aa24.69■■□□□ 1.54
TMEM139-208ENST00000482420 TLL2Q9Y6L7 1015 aa24.69■■□□□ 1.54
TMEM139-208ENST00000482420 CDHR2Q9BYE9 1310 aa24.68■■□□□ 1.54
TMEM139-208ENST00000482420 HSPA8P11142 646 aaKnown RBP24.68■■□□□ 1.54
TMEM139-208ENST00000482420 ECE1P42892 770 aa24.68■■□□□ 1.54
TMEM139-208ENST00000482420 HIRAP54198 1017 aaPredicted RBP24.68■■□□□ 1.54
TMEM139-208ENST00000482420 GOLGA2Q08379 1002 aa24.68■■□□□ 1.54
TMEM139-208ENST00000482420 PHAXQ9H814 394 aaKnown RBP24.68■■□□□ 1.54
TMEM139-208ENST00000482420 ZNF408Q9H9D4 720 aa24.68■■□□□ 1.54
TMEM139-208ENST00000482420 CNOT7Q9UIV1 285 aaKnown RBP24.68■■□□□ 1.54
TMEM139-208ENST00000482420 ZBTB12Q9Y330 459 aaPredicted RBP24.68■■□□□ 1.54
TMEM139-208ENST00000482420 C6orf229H3BNL8 230 aa24.67■■□□□ 1.54
TMEM139-208ENST00000482420 ZNF853P0CG23 659 aa24.67■■□□□ 1.54
TMEM139-208ENST00000482420 GPSM2P81274 684 aa24.67■■□□□ 1.54
TMEM139-208ENST00000482420 MICALL2Q8IY33 904 aa24.67■■□□□ 1.54
TMEM139-208ENST00000482420 GPR101Q96P66 508 aaPredicted RBP24.67■■□□□ 1.54
TMEM139-208ENST00000482420 THSD7BQ9C0I4 1608 aa24.67■■□□□ 1.54
TMEM139-208ENST00000482420 IFT57Q9NWB7 429 aa24.66■■□□□ 1.54
TMEM139-208ENST00000482420 POLLQ9UGP5 575 aa24.66■■□□□ 1.54
TMEM139-208ENST00000482420 PSMD14O00487 310 aa24.65■■□□□ 1.54
TMEM139-208ENST00000482420 MYD88Q99836 296 aa24.65■■□□□ 1.54
TMEM139-208ENST00000482420 H7C1D1 291 aa24.64■■□□□ 1.54
TMEM139-208ENST00000482420 AOC2O75106 756 aa24.64■■□□□ 1.54
TMEM139-208ENST00000482420 TRIM28Q13263 835 aaKnown RBP24.64■■□□□ 1.54
TMEM139-208ENST00000482420 DOK7Q18PE1 504 aa24.64■■□□□ 1.54
TMEM139-208ENST00000482420 BEGAINQ9BUH8 593 aa24.64■■□□□ 1.54
TMEM139-208ENST00000482420 GNAI1P63096 354 aa24.63■■□□□ 1.53
TMEM139-208ENST00000482420 SAMD7Q7Z3H4 446 aa24.63■■□□□ 1.53
TMEM139-208ENST00000482420 SAPCD2Q86UD0 394 aa24.63■■□□□ 1.53
TMEM139-208ENST00000482420 ZBTB38Q8NAP3 1195 aaPredicted RBP24.63■■□□□ 1.53
TMEM139-208ENST00000482420 PGAP2Q9UHJ9 254 aa24.63■■□□□ 1.53
TMEM139-208ENST00000482420 ECE2O60344 883 aa24.62■■□□□ 1.53
TMEM139-208ENST00000482420 RPS8P62241 208 aaKnown RBP24.62■■□□□ 1.53
TMEM139-208ENST00000482420 CALD1Q05682 793 aaKnown RBP24.62■■□□□ 1.53
TMEM139-208ENST00000482420 C8orf58Q8NAV2 365 aa24.62■■□□□ 1.53
TMEM139-208ENST00000482420 ZC3H15Q8WU90 426 aaKnown RBP24.62■■□□□ 1.53
TMEM139-208ENST00000482420 JARID2Q92833 1246 aaPredicted RBP24.62■■□□□ 1.53
TMEM139-208ENST00000482420 SEC31BQ9NQW1 1179 aa24.62■■□□□ 1.53
TMEM139-208ENST00000482420 KCNQ5Q9NR82 932 aa24.62■■□□□ 1.53
TMEM139-208ENST00000482420 CDC37L1Q7L3B6 337 aa24.61■■□□□ 1.53
TMEM139-208ENST00000482420 TBC1D16Q8TBP0 767 aa24.61■■□□□ 1.53
TMEM139-208ENST00000482420 CCDC85AQ96PX6 553 aaPredicted RBP24.61■■□□□ 1.53
TMEM139-208ENST00000482420 EYA3Q99504 573 aa24.61■■□□□ 1.53
TMEM139-208ENST00000482420 TSKSQ9UJT2 592 aa24.61■■□□□ 1.53
TMEM139-208ENST00000482420 RTL9Q8NET4 1388 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms