RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ZNF541Q9H0D2 1346 aa25.49■■□□□ 1.67
MSH5-215ENST00000482280 SLC4A2P04920 1241 aa25.49■■□□□ 1.67
MSH5-215ENST00000482280 SF3B3Q15393 1217 aaKnown RBP25.49■■□□□ 1.67
MSH5-215ENST00000482280 GPC2Q8N158 579 aa25.49■■□□□ 1.67
MSH5-215ENST00000482280 L3MBTL3Q96JM7 780 aaPredicted RBP25.49■■□□□ 1.67
MSH5-215ENST00000482280 POTECB2RU33 542 aa25.48■■□□□ 1.67
MSH5-215ENST00000482280 HACL1Q9UJ83 578 aa25.48■■□□□ 1.67
MSH5-215ENST00000482280 GJA3Q9Y6H8 435 aa25.48■■□□□ 1.67
MSH5-215ENST00000482280 PI4KAP2A4QPH2 592 aa25.47■■□□□ 1.67
MSH5-215ENST00000482280 PCCAP05165 728 aaPredicted RBP25.47■■□□□ 1.67
MSH5-215ENST00000482280 LMOD1P29536 600 aaPredicted RBP25.47■■□□□ 1.67
MSH5-215ENST00000482280 PI4KAP1Q8N8J0 262 aa25.47■■□□□ 1.67
MSH5-215ENST00000482280 SNED1Q8TER0 1413 aa25.46■■□□□ 1.67
MSH5-215ENST00000482280 AOC3Q16853 763 aa25.46■■□□□ 1.67
MSH5-215ENST00000482280 CCDC152Q4G0S7 254 aa25.45■■□□□ 1.66
MSH5-215ENST00000482280 EAPPQ56P03 285 aaPredicted RBP25.45■■□□□ 1.66
MSH5-215ENST00000482280 CHADLQ6NUI6 762 aa25.45■■□□□ 1.66
MSH5-215ENST00000482280 PDE8AO60658 829 aa25.44■■□□□ 1.66
MSH5-215ENST00000482280 EXOSC9Q06265 439 aaKnown RBP25.44■■□□□ 1.66
MSH5-215ENST00000482280 FKBP5Q13451 457 aaPredicted RBP25.44■■□□□ 1.66
MSH5-215ENST00000482280 PNMA8AQ86V59 439 aaPredicted RBP25.44■■□□□ 1.66
MSH5-215ENST00000482280 TAF1DQ9H5J8 278 aaPredicted RBP25.44■■□□□ 1.66
MSH5-215ENST00000482280 CLEC11AQ9Y240 323 aa25.44■■□□□ 1.66
MSH5-215ENST00000482280 LAMB2P55268 1798 aa25.44■■□□□ 1.66
MSH5-215ENST00000482280 LDHDQ86WU2 507 aa25.43■■□□□ 1.66
MSH5-215ENST00000482280 RTFDC1Q9BY42 306 aaPredicted RBP25.43■■□□□ 1.66
MSH5-215ENST00000482280 NSFL1CQ9UNZ2 370 aaKnown RBP25.43■■□□□ 1.66
MSH5-215ENST00000482280 EPHX2P34913 555 aa25.42■■□□□ 1.66
MSH5-215ENST00000482280 FLIIQ13045 1269 aa25.42■■□□□ 1.66
MSH5-215ENST00000482280 RPS8P62241 208 aaKnown RBP25.41■■□□□ 1.66
MSH5-215ENST00000482280 CELF1Q92879 486 aaKnown RBP25.41■■□□□ 1.66
MSH5-215ENST00000482280 ZNRF3Q9ULT6 936 aa25.41■■□□□ 1.66
MSH5-215ENST00000482280 DDX60Q8IY21 1712 aaKnown RBP25.4■■□□□ 1.66
MSH5-215ENST00000482280 SLC51AQ86UW1 340 aa25.4■■□□□ 1.66
MSH5-215ENST00000482280 SCN4AP35499 1836 aa25.4■■□□□ 1.66
MSH5-215ENST00000482280 C6orf229H3BNL8 230 aa25.39■■□□□ 1.66
MSH5-215ENST00000482280 VAMP4O75379 141 aa25.39■■□□□ 1.66
MSH5-215ENST00000482280 KIAA2012Q0VF49 1180 aa25.39■■□□□ 1.66
MSH5-215ENST00000482280 G2E3Q7L622 706 aa25.39■■□□□ 1.66
MSH5-215ENST00000482280 JARID2Q92833 1246 aaPredicted RBP25.39■■□□□ 1.66
MSH5-215ENST00000482280 EYA3Q99504 573 aa25.39■■□□□ 1.66
MSH5-215ENST00000482280 CDHR2Q9BYE9 1310 aa25.38■■□□□ 1.65
MSH5-215ENST00000482280 WASHC4Q2M389 1173 aa25.38■■□□□ 1.65
MSH5-215ENST00000482280 TNIP1Q15025 636 aa25.37■■□□□ 1.65
MSH5-215ENST00000482280 CWF19L2Q2TBE0 894 aaKnown RBP25.37■■□□□ 1.65
MSH5-215ENST00000482280 ANKRD18AQ8IVF6 992 aa25.37■■□□□ 1.65
MSH5-215ENST00000482280 DNAAF4Q8WXU2 420 aa25.37■■□□□ 1.65
MSH5-215ENST00000482280 CCDC85AQ96PX6 553 aaPredicted RBP25.37■■□□□ 1.65
MSH5-215ENST00000482280 ANKIB1Q9P2G1 1089 aa25.37■■□□□ 1.65
MSH5-215ENST00000482280 NEURL1BA8MQ27 555 aa25.36■■□□□ 1.65
MSH5-215ENST00000482280 G3V3G9 751 aa25.36■■□□□ 1.65
MSH5-215ENST00000482280 IGKV5-2P06315 115 aa25.36■■□□□ 1.65
MSH5-215ENST00000482280 POTEIP0CG38 1075 aa25.36■■□□□ 1.65
MSH5-215ENST00000482280 POTEJP0CG39 1038 aa25.36■■□□□ 1.65
MSH5-215ENST00000482280 HTRA3P83110 453 aa25.36■■□□□ 1.65
MSH5-215ENST00000482280 DCAF8Q5TAQ9 597 aa25.36■■□□□ 1.65
MSH5-215ENST00000482280 CDC5LQ99459 802 aaKnown RBP25.36■■□□□ 1.65
MSH5-215ENST00000482280 CTSWP56202 376 aa25.35■■□□□ 1.65
MSH5-215ENST00000482280 CIAPIN1Q6FI81 312 aa25.35■■□□□ 1.65
MSH5-215ENST00000482280 UBE3BQ7Z3V4 1068 aa25.34■■□□□ 1.65
MSH5-215ENST00000482280 KLRG1Q96E93 195 aa25.34■■□□□ 1.65
MSH5-215ENST00000482280 BCL2L13Q9BXK5 485 aa25.34■■□□□ 1.65
MSH5-215ENST00000482280 SEC31BQ9NQW1 1179 aa25.34■■□□□ 1.65
MSH5-215ENST00000482280 COL4A5P29400 1685 aa25.33■■□□□ 1.65
MSH5-215ENST00000482280 GPSM2P81274 684 aa25.33■■□□□ 1.65
MSH5-215ENST00000482280 CXCL9Q07325 125 aa25.33■■□□□ 1.65
MSH5-215ENST00000482280 DNAJC5GQ8N7S2 189 aa25.33■■□□□ 1.65
MSH5-215ENST00000482280 LINS1Q8NG48 757 aa25.33■■□□□ 1.65
MSH5-215ENST00000482280 ZC3H12CQ9C0D7 883 aaKnown RBP25.33■■□□□ 1.65
MSH5-215ENST00000482280 SPINK5Q9NQ38 1064 aaPredicted RBP25.33■■□□□ 1.65
MSH5-215ENST00000482280 RIMBP2O15034 1052 aa25.32■■□□□ 1.64
MSH5-215ENST00000482280 GCKRQ14397 625 aa25.32■■□□□ 1.64
MSH5-215ENST00000482280 RAD17O75943 681 aa25.31■■□□□ 1.64
MSH5-215ENST00000482280 SCNN1DP51172 638 aa25.31■■□□□ 1.64
MSH5-215ENST00000482280 GGA1Q9UJY5 639 aa25.31■■□□□ 1.64
MSH5-215ENST00000482280 UFL1O94874 794 aa25.3■■□□□ 1.64
MSH5-215ENST00000482280 USP50Q70EL3 339 aaPredicted RBP25.3■■□□□ 1.64
MSH5-215ENST00000482280 TAF1P21675 1872 aa25.3■■□□□ 1.64
MSH5-215ENST00000482280 LRRC37AA6NMS7 1700 aa25.29■■□□□ 1.64
MSH5-215ENST00000482280 E9PSI1 815 aa25.29■■□□□ 1.64
MSH5-215ENST00000482280 H7C1W4 665 aa25.29■■□□□ 1.64
MSH5-215ENST00000482280 EPS15P42566 896 aa25.29■■□□□ 1.64
MSH5-215ENST00000482280 TTLL11Q8NHH1 800 aa25.29■■□□□ 1.64
MSH5-215ENST00000482280 TBC1D16Q8TBP0 767 aa25.29■■□□□ 1.64
MSH5-215ENST00000482280 CREBZFQ9NS37 354 aa25.29■■□□□ 1.64
MSH5-215ENST00000482280 ADARB2Q9NS39 739 aaKnown RBP25.29■■□□□ 1.64
MSH5-215ENST00000482280 GPRC5DQ9NZD1 345 aa25.29■■□□□ 1.64
MSH5-215ENST00000482280 POLLQ9UGP5 575 aa25.29■■□□□ 1.64
MSH5-215ENST00000482280 IGHMBP2P38935 993 aaKnown RBP25.28■■□□□ 1.64
MSH5-215ENST00000482280 GMPSP49915 693 aaPredicted RBP25.28■■□□□ 1.64
MSH5-215ENST00000482280 MAP1SQ66K74 1059 aaPredicted RBP25.28■■□□□ 1.64
MSH5-215ENST00000482280 CNTROBQ8N137 903 aa25.28■■□□□ 1.64
MSH5-215ENST00000482280 DBNDD1Q9H9R9 158 aa25.28■■□□□ 1.64
MSH5-215ENST00000482280 PODXL2Q9NZ53 605 aa25.28■■□□□ 1.64
MSH5-215ENST00000482280 CEP350Q5VT06 3117 aa25.28■■□□□ 1.64
MSH5-215ENST00000482280 GREM2Q9H772 168 aa25.27■■□□□ 1.64
MSH5-215ENST00000482280 XDHP47989 1333 aa25.27■■□□□ 1.64
MSH5-215ENST00000482280 CCER2I3L3R5 266 aa25.26■■□□□ 1.63
MSH5-215ENST00000482280 ECE2O60344 883 aa25.26■■□□□ 1.63
MSH5-215ENST00000482280 ZNF521Q96K83 1311 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms