RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 SNED1Q8TER0 1413 aa18.91■□□□□ 0.62
OPTN-210ENST00000482140 PDE8AO60658 829 aa18.91■□□□□ 0.62
OPTN-210ENST00000482140 IGKV5-2P06315 115 aa18.91■□□□□ 0.62
OPTN-210ENST00000482140 VEGFAP15692 232 aaPredicted RBP18.91■□□□□ 0.62
OPTN-210ENST00000482140 TMC4Q7Z404 712 aa18.91■□□□□ 0.62
OPTN-210ENST00000482140 DNAAF4Q8WXU2 420 aa18.91■□□□□ 0.62
OPTN-210ENST00000482140 JARID2Q92833 1246 aaPredicted RBP18.91■□□□□ 0.62
OPTN-210ENST00000482140 NEURL1BA8MQ27 555 aa18.9■□□□□ 0.62
OPTN-210ENST00000482140 CWF19L2Q2TBE0 894 aaKnown RBP18.9■□□□□ 0.62
OPTN-210ENST00000482140 DPP8Q6V1X1 898 aaPredicted RBP18.9■□□□□ 0.62
OPTN-210ENST00000482140 SLC51AQ86UW1 340 aa18.9■□□□□ 0.62
OPTN-210ENST00000482140 SUPT20HQ8NEM7 779 aa18.9■□□□□ 0.62
OPTN-210ENST00000482140 WDR90Q96KV7 1748 aa18.9■□□□□ 0.62
OPTN-210ENST00000482140 MYH3P11055 1940 aa18.9■□□□□ 0.62
OPTN-210ENST00000482140 CCDC152Q4G0S7 254 aa18.89■□□□□ 0.61
OPTN-210ENST00000482140 LARGE2Q8N3Y3 721 aa18.89■□□□□ 0.61
OPTN-210ENST00000482140 MPNDQ8N594 471 aa18.89■□□□□ 0.61
OPTN-210ENST00000482140 CDHR2Q9BYE9 1310 aa18.89■□□□□ 0.61
OPTN-210ENST00000482140 DDNO94850 711 aaPredicted RBP18.88■□□□□ 0.61
OPTN-210ENST00000482140 RBM46Q8TBY0 533 aaKnown RBP18.88■□□□□ 0.61
OPTN-210ENST00000482140 CELF1Q92879 486 aaKnown RBP18.88■□□□□ 0.61
OPTN-210ENST00000482140 PPIP5K2O43314 1243 aa18.87■□□□□ 0.61
OPTN-210ENST00000482140 EIF6P56537 245 aaKnown RBP18.87■□□□□ 0.61
OPTN-210ENST00000482140 SLFN5Q08AF3 891 aa18.87■□□□□ 0.61
OPTN-210ENST00000482140 NIM1KQ8IY84 436 aa18.87■□□□□ 0.61
OPTN-210ENST00000482140 LINS1Q8NG48 757 aa18.87■□□□□ 0.61
OPTN-210ENST00000482140 LRRC37AA6NMS7 1700 aa18.86■□□□□ 0.61
OPTN-210ENST00000482140 ZNF541Q9H0D2 1346 aa18.86■□□□□ 0.61
OPTN-210ENST00000482140 UBE3BQ7Z3V4 1068 aa18.86■□□□□ 0.61
OPTN-210ENST00000482140 MIER1Q8N108 512 aa18.86■□□□□ 0.61
OPTN-210ENST00000482140 CCDC85AQ96PX6 553 aaPredicted RBP18.86■□□□□ 0.61
OPTN-210ENST00000482140 VPS33BQ9H267 617 aa18.86■□□□□ 0.61
OPTN-210ENST00000482140 F6X3S4 739 aa18.85■□□□□ 0.61
OPTN-210ENST00000482140 FZD9O00144 591 aa18.85■□□□□ 0.61
OPTN-210ENST00000482140 CTSWP56202 376 aa18.85■□□□□ 0.61
OPTN-210ENST00000482140 RPS8P62241 208 aaKnown RBP18.85■□□□□ 0.61
OPTN-210ENST00000482140 GCKRQ14397 625 aa18.85■□□□□ 0.61
OPTN-210ENST00000482140 AOC3Q16853 763 aa18.85■□□□□ 0.61
OPTN-210ENST00000482140 RTFDC1Q9BY42 306 aaPredicted RBP18.85■□□□□ 0.61
OPTN-210ENST00000482140 SEC31BQ9NQW1 1179 aa18.85■□□□□ 0.61
OPTN-210ENST00000482140 IQCA1LA6NCM1 817 aa18.84■□□□□ 0.61
OPTN-210ENST00000482140 HSPA6P17066 643 aa18.84■□□□□ 0.61
OPTN-210ENST00000482140 CDCA7LQ96GN5 454 aa18.84■□□□□ 0.61
OPTN-210ENST00000482140 SCN4AP35499 1836 aa18.84■□□□□ 0.61
OPTN-210ENST00000482140 H7C1W4 665 aa18.83■□□□□ 0.6
OPTN-210ENST00000482140 FSTL1Q12841 308 aa18.83■□□□□ 0.6
OPTN-210ENST00000482140 SMC1BQ8NDV3 1235 aa18.83■□□□□ 0.6
OPTN-210ENST00000482140 NSFL1CQ9UNZ2 370 aaKnown RBP18.83■□□□□ 0.6
OPTN-210ENST00000482140 COL4A5P29400 1685 aa18.82■□□□□ 0.6
OPTN-210ENST00000482140 POTECB2RU33 542 aa18.82■□□□□ 0.6
OPTN-210ENST00000482140 SLC4A10Q6U841 1118 aa18.82■□□□□ 0.6
OPTN-210ENST00000482140 ANKRD18AQ8IVF6 992 aa18.82■□□□□ 0.6
OPTN-210ENST00000482140 L3MBTL3Q96JM7 780 aaPredicted RBP18.82■□□□□ 0.6
OPTN-210ENST00000482140 CDC5LQ99459 802 aaKnown RBP18.82■□□□□ 0.6
OPTN-210ENST00000482140 GJA3Q9Y6H8 435 aa18.82■□□□□ 0.6
OPTN-210ENST00000482140 COL4A1P02462 1669 aa18.82■□□□□ 0.6
OPTN-210ENST00000482140 C6orf229H3BNL8 230 aa18.81■□□□□ 0.6
OPTN-210ENST00000482140 BEND3Q5T5X7 828 aa18.81■□□□□ 0.6
OPTN-210ENST00000482140 GPC2Q8N158 579 aa18.81■□□□□ 0.6
OPTN-210ENST00000482140 TTLL11Q8NHH1 800 aa18.81■□□□□ 0.6
OPTN-210ENST00000482140 SPEF2Q9C093 1822 aa18.81■□□□□ 0.6
OPTN-210ENST00000482140 GPSM2P81274 684 aa18.8■□□□□ 0.6
OPTN-210ENST00000482140 KIAA2012Q0VF49 1180 aa18.8■□□□□ 0.6
OPTN-210ENST00000482140 MRPL50Q8N5N7 158 aaKnown RBP18.8■□□□□ 0.6
OPTN-210ENST00000482140 ANKIB1Q9P2G1 1089 aa18.8■□□□□ 0.6
OPTN-210ENST00000482140 HACL1Q9UJ83 578 aa18.8■□□□□ 0.6
OPTN-210ENST00000482140 DUOX1Q9NRD9 1551 aa18.8■□□□□ 0.6
OPTN-210ENST00000482140 SSH1Q8WYL5 1049 aa18.79■□□□□ 0.6
OPTN-210ENST00000482140 EYA3Q99504 573 aa18.79■□□□□ 0.6
OPTN-210ENST00000482140 PLA2G12BQ9BX93 195 aa18.79■□□□□ 0.6
OPTN-210ENST00000482140 GREM2Q9H772 168 aa18.79■□□□□ 0.6
OPTN-210ENST00000482140 ZNRF3Q9ULT6 936 aa18.79■□□□□ 0.6
OPTN-210ENST00000482140 PTPRCP08575 1304 aa18.78■□□□□ 0.6
OPTN-210ENST00000482140 LMOD1P29536 600 aaPredicted RBP18.78■□□□□ 0.6
OPTN-210ENST00000482140 WASHC4Q2M389 1173 aa18.78■□□□□ 0.6
OPTN-210ENST00000482140 TRMT2AQ8IZ69 625 aaKnown RBP18.78■□□□□ 0.6
OPTN-210ENST00000482140 BCL2L13Q9BXK5 485 aa18.78■□□□□ 0.6
OPTN-210ENST00000482140 SRCIN1Q9C0H9 1055 aa18.78■□□□□ 0.6
OPTN-210ENST00000482140 C9orf78Q9NZ63 289 aaPredicted RBP18.78■□□□□ 0.6
OPTN-210ENST00000482140 RTL9Q8NET4 1388 aa18.78■□□□□ 0.6
OPTN-210ENST00000482140 ALDH1L1O75891 902 aa18.77■□□□□ 0.6
OPTN-210ENST00000482140 CT47B1P0C2W7 299 aaPredicted RBP18.77■□□□□ 0.6
OPTN-210ENST00000482140 IGHMBP2P38935 993 aaKnown RBP18.77■□□□□ 0.6
OPTN-210ENST00000482140 APLP1P51693 650 aa18.77■□□□□ 0.6
OPTN-210ENST00000482140 CASP7P55210 303 aa18.77■□□□□ 0.6
OPTN-210ENST00000482140 ALDH1L2Q3SY69 923 aa18.77■□□□□ 0.6
OPTN-210ENST00000482140 EAPPQ56P03 285 aaPredicted RBP18.77■□□□□ 0.6
OPTN-210ENST00000482140 TAF1DQ9H5J8 278 aaPredicted RBP18.77■□□□□ 0.6
OPTN-210ENST00000482140 SMC4Q9NTJ3 1288 aa18.77■□□□□ 0.6
OPTN-210ENST00000482140 POLLQ9UGP5 575 aa18.77■□□□□ 0.6
OPTN-210ENST00000482140 GGA1Q9UJY5 639 aa18.77■□□□□ 0.6
OPTN-210ENST00000482140 LTBP1Q14766 1721 aa18.77■□□□□ 0.59
OPTN-210ENST00000482140 GRM8O00222 908 aa18.76■□□□□ 0.59
OPTN-210ENST00000482140 RIMBP2O15034 1052 aa18.76■□□□□ 0.59
OPTN-210ENST00000482140 UFL1O94874 794 aa18.76■□□□□ 0.59
OPTN-210ENST00000482140 EPHX2P34913 555 aa18.76■□□□□ 0.59
OPTN-210ENST00000482140 TBC1D16Q8TBP0 767 aa18.76■□□□□ 0.59
OPTN-210ENST00000482140 PODXL2Q9NZ53 605 aa18.76■□□□□ 0.59
OPTN-210ENST00000482140 CHMP3Q9Y3E7 222 aa18.76■□□□□ 0.59
OPTN-210ENST00000482140 XDHP47989 1333 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms