RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 VSIG10Q8N0Z9 540 aa12.04□□□□□ -0.48
HLA-B-253ENST00000481849 N4BP2Q86UW6 1770 aaPredicted RBP12.04□□□□□ -0.48
HLA-B-253ENST00000481849 SCN11AQ9UI33 1791 aa12.04□□□□□ -0.48
HLA-B-253ENST00000481849 KIAA1551Q9HCM1 1747 aa12.03□□□□□ -0.48
HLA-B-253ENST00000481849 SOWAHBA6NEL2 793 aa12.03□□□□□ -0.48
HLA-B-253ENST00000481849 KCNQ3O43525 872 aa12.03□□□□□ -0.48
HLA-B-253ENST00000481849 RGS20O76081 388 aa12.03□□□□□ -0.48
HLA-B-253ENST00000481849 SERPINB2P05120 415 aa12.03□□□□□ -0.48
HLA-B-253ENST00000481849 U2AF1L5P0DN76 240 aaPredicted RBP12.03□□□□□ -0.48
HLA-B-253ENST00000481849 U2AF1Q01081 240 aaKnown RBP eCLIP12.03□□□□□ -0.48
HLA-B-253ENST00000481849 ZNF790Q6PG37 636 aa12.03□□□□□ -0.48
HLA-B-253ENST00000481849 RSPH6AQ9H0K4 717 aa12.03□□□□□ -0.48
HLA-B-253ENST00000481849 MYH14Q7Z406 1995 aaKnown RBP12.03□□□□□ -0.48
HLA-B-253ENST00000481849 GRXCR2A6NFK2 248 aa12.02□□□□□ -0.49
HLA-B-253ENST00000481849 BTBD11A6QL63 1104 aa12.02□□□□□ -0.49
HLA-B-253ENST00000481849 PPP2R1AP30153 589 aa12.02□□□□□ -0.49
HLA-B-253ENST00000481849 TSR1Q2NL82 804 aaKnown RBP12.02□□□□□ -0.49
HLA-B-253ENST00000481849 PACS2Q86VP3 889 aa12.02□□□□□ -0.49
HLA-B-253ENST00000481849 TBC1D2BQ9UPU7 963 aa12.02□□□□□ -0.49
HLA-B-253ENST00000481849 NUDCQ9Y266 331 aa12.02□□□□□ -0.49
HLA-B-253ENST00000481849 C2CD5Q86YS7 1000 aa12.01□□□□□ -0.49
HLA-B-253ENST00000481849 CCDC24Q8N4L8 307 aa12.01□□□□□ -0.49
HLA-B-253ENST00000481849 RNF181Q9P0P0 153 aa12.01□□□□□ -0.49
HLA-B-253ENST00000481849 HEG1Q9ULI3 1381 aa12.01□□□□□ -0.49
HLA-B-253ENST00000481849 KIF13BQ9NQT8 1826 aa12□□□□□ -0.49
HLA-B-253ENST00000481849 A0A087WZG4 1122 aa12□□□□□ -0.49
HLA-B-253ENST00000481849 A1BGP04217 495 aa12□□□□□ -0.49
HLA-B-253ENST00000481849 PIP4K2AP48426 406 aaPredicted RBP12□□□□□ -0.49
HLA-B-253ENST00000481849 LBX1P52954 281 aa12□□□□□ -0.49
HLA-B-253ENST00000481849 EIF5P55010 431 aaKnown RBP12□□□□□ -0.49
HLA-B-253ENST00000481849 RASSF7Q02833 373 aa12□□□□□ -0.49
HLA-B-253ENST00000481849 TBC1D9BQ66K14 1250 aa12□□□□□ -0.49
HLA-B-253ENST00000481849 MCM10Q7L590 875 aa12□□□□□ -0.49
HLA-B-253ENST00000481849 C16orf71Q8IYS4 520 aaPredicted RBP12□□□□□ -0.49
HLA-B-253ENST00000481849 FMNL2Q96PY5 1086 aa12□□□□□ -0.49
HLA-B-253ENST00000481849 TEX13AQ9BXU3 409 aaPredicted RBP12□□□□□ -0.49
HLA-B-253ENST00000481849 ADAMTS7Q9UKP4 1686 aa12□□□□□ -0.49
HLA-B-253ENST00000481849 DCTN1Q14203 1278 aa11.99□□□□□ -0.49
HLA-B-253ENST00000481849 NPM2Q86SE8 214 aaKnown RBP11.99□□□□□ -0.49
HLA-B-253ENST00000481849 RTF1Q92541 710 aaKnown RBP11.99□□□□□ -0.49
HLA-B-253ENST00000481849 CARMIL3Q8ND23 1372 aa11.99□□□□□ -0.49
HLA-B-253ENST00000481849 CEMIPQ8WUJ3 1361 aa11.98□□□□□ -0.49
HLA-B-253ENST00000481849 PRAMEF22A3QJZ6 481 aa11.98□□□□□ -0.49
HLA-B-253ENST00000481849 H0YIN7 160 aa11.98□□□□□ -0.49
HLA-B-253ENST00000481849 NYAP1Q6ZVC0 841 aa11.98□□□□□ -0.49
HLA-B-253ENST00000481849 NPHP1O15259 732 aa11.97□□□□□ -0.49
HLA-B-253ENST00000481849 IL6STP40189 918 aaPredicted RBP11.97□□□□□ -0.49
HLA-B-253ENST00000481849 TTLL6Q8N841 843 aa11.97□□□□□ -0.49
HLA-B-253ENST00000481849 ZNF622Q969S3 477 aaKnown RBP eCLIP11.97□□□□□ -0.49
HLA-B-253ENST00000481849 LRCH3Q96II8 777 aa11.97□□□□□ -0.49
HLA-B-253ENST00000481849 WBP1LQ9NX94 342 aa11.97□□□□□ -0.49
HLA-B-253ENST00000481849 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.97□□□□□ -0.49
HLA-B-253ENST00000481849 ARIH1Q9Y4X5 557 aaPredicted RBP11.97□□□□□ -0.49
HLA-B-253ENST00000481849 USP16Q9Y5T5 823 aa11.97□□□□□ -0.49
HLA-B-253ENST00000481849 SZT2Q5T011 3432 aa11.96□□□□□ -0.49
HLA-B-253ENST00000481849 PRR5LQ6MZQ0 368 aa11.96□□□□□ -0.49
HLA-B-253ENST00000481849 DZIP3Q86Y13 1208 aaKnown RBP11.96□□□□□ -0.49
HLA-B-253ENST00000481849 RRAGCQ9HB90 399 aa11.96□□□□□ -0.49
HLA-B-253ENST00000481849 TSKSQ9UJT2 592 aa11.96□□□□□ -0.49
HLA-B-253ENST00000481849 KDM2BQ8NHM5 1336 aa11.95□□□□□ -0.5
HLA-B-253ENST00000481849 CAMTA2O94983 1202 aa11.95□□□□□ -0.5
HLA-B-253ENST00000481849 AIDAQ96BJ3 306 aa11.95□□□□□ -0.5
HLA-B-253ENST00000481849 SETDB2Q96T68 719 aa11.95□□□□□ -0.5
HLA-B-253ENST00000481849 MIS18AQ9NYP9 233 aa11.95□□□□□ -0.5
HLA-B-253ENST00000481849 UBR2Q8IWV8 1755 aa11.95□□□□□ -0.5
HLA-B-253ENST00000481849 PDE6BP35913 854 aa11.94□□□□□ -0.5
HLA-B-253ENST00000481849 CDCA7LQ96GN5 454 aa11.94□□□□□ -0.5
HLA-B-253ENST00000481849 TSR3Q9UJK0 312 aaKnown RBP11.94□□□□□ -0.5
HLA-B-253ENST00000481849 HPS5Q9UPZ3 1129 aa11.94□□□□□ -0.5
HLA-B-253ENST00000481849 C21orf2O43822 256 aa11.93□□□□□ -0.5
HLA-B-253ENST00000481849 SNRPA1P09661 255 aaKnown RBP11.93□□□□□ -0.5
HLA-B-253ENST00000481849 LMNB1P20700 586 aa11.93□□□□□ -0.5
HLA-B-253ENST00000481849 PRSS12P56730 875 aa11.93□□□□□ -0.5
HLA-B-253ENST00000481849 CNBD1Q8NA66 436 aa11.93□□□□□ -0.5
HLA-B-253ENST00000481849 GCC1Q96CN9 775 aa11.93□□□□□ -0.5
HLA-B-253ENST00000481849 BRIP1Q9BX63 1249 aa11.93□□□□□ -0.5
HLA-B-253ENST00000481849 FAM177BA6PVY3 158 aa11.92□□□□□ -0.5
HLA-B-253ENST00000481849 NFKBIEO00221 500 aa11.92□□□□□ -0.5
HLA-B-253ENST00000481849 NEFMP07197 916 aa11.92□□□□□ -0.5
HLA-B-253ENST00000481849 ST5P78524 1137 aa11.92□□□□□ -0.5
HLA-B-253ENST00000481849 NGEFQ8N5V2 710 aa11.92□□□□□ -0.5
HLA-B-253ENST00000481849 COL6A3P12111 3177 aa11.92□□□□□ -0.5
HLA-B-253ENST00000481849 BRCA1P38398 1863 aaKnown RBP11.91□□□□□ -0.5
HLA-B-253ENST00000481849 NBPF26B4DH59 902 aa11.91□□□□□ -0.5
HLA-B-253ENST00000481849 HTATSF1O43719 755 aaKnown RBP11.91□□□□□ -0.5
HLA-B-253ENST00000481849 ITGBL1O95965 494 aaPredicted RBP11.91□□□□□ -0.5
HLA-B-253ENST00000481849 TAF7Q15545 349 aaPredicted RBP11.91□□□□□ -0.5
HLA-B-253ENST00000481849 HABP4Q5JVS0 413 aaKnown RBP11.91□□□□□ -0.5
HLA-B-253ENST00000481849 NBPF10Q6P3W6 841 aaKnown RBP11.91□□□□□ -0.5
HLA-B-253ENST00000481849 NBPF5PQ86XG9 351 aaPredicted RBP11.91□□□□□ -0.5
HLA-B-253ENST00000481849 NBPF15Q8N660 670 aa11.91□□□□□ -0.5
HLA-B-253ENST00000481849 SMC1BQ8NDV3 1235 aa11.91□□□□□ -0.5
HLA-B-253ENST00000481849 THUMPD2Q9BTF0 503 aaKnown RBP11.91□□□□□ -0.5
HLA-B-253ENST00000481849 SMAPO00193 183 aa11.9□□□□□ -0.5
HLA-B-253ENST00000481849 IRX2Q9BZI1 471 aaPredicted RBP11.9□□□□□ -0.5
HLA-B-253ENST00000481849 NRXN2Q9P2S2 1712 aa11.9□□□□□ -0.5
HLA-B-253ENST00000481849 ZNF652Q9Y2D9 606 aa11.9□□□□□ -0.5
HLA-B-253ENST00000481849 SIPA1L3O60292 1781 aaPredicted RBP11.9□□□□□ -0.51
HLA-B-253ENST00000481849 AFDNP55196 1824 aaKnown RBP11.89□□□□□ -0.51
HLA-B-253ENST00000481849 VIRMAQ69YN4 1812 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms