RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 MYD88Q99836 296 aa28.65■■■□□ 2.18
GPCPD1-206ENST00000481690 CHMP4AQ9BY43 222 aa28.65■■■□□ 2.18
GPCPD1-206ENST00000481690 LRRC37AA6NMS7 1700 aa28.65■■■□□ 2.18
GPCPD1-206ENST00000481690 MPNDQ8N594 471 aa28.64■■■□□ 2.18
GPCPD1-206ENST00000481690 TRIM28Q13263 835 aaKnown RBP28.63■■■□□ 2.17
GPCPD1-206ENST00000481690 CLEC11AQ9Y240 323 aa28.63■■■□□ 2.17
GPCPD1-206ENST00000481690 ADAMTSL1Q8N6G6 1762 aa28.62■■■□□ 2.17
GPCPD1-206ENST00000481690 IRS4O14654 1257 aaPredicted RBP28.62■■■□□ 2.17
GPCPD1-206ENST00000481690 DDX58O95786 925 aaKnown RBP28.62■■■□□ 2.17
GPCPD1-206ENST00000481690 LTBP1Q14766 1721 aa28.62■■■□□ 2.17
GPCPD1-206ENST00000481690 LMOD1P29536 600 aaPredicted RBP28.61■■■□□ 2.17
GPCPD1-206ENST00000481690 RTFDC1Q9BY42 306 aaPredicted RBP28.61■■■□□ 2.17
GPCPD1-206ENST00000481690 SALL2Q9Y467 1007 aaPredicted RBP28.61■■■□□ 2.17
GPCPD1-206ENST00000481690 SF3B3Q15393 1217 aaKnown RBP28.6■■■□□ 2.17
GPCPD1-206ENST00000481690 TMC4Q7Z404 712 aa28.6■■■□□ 2.17
GPCPD1-206ENST00000481690 ZBTB38Q8NAP3 1195 aaPredicted RBP28.6■■■□□ 2.17
GPCPD1-206ENST00000481690 STK31Q9BXU1 1019 aa28.6■■■□□ 2.17
GPCPD1-206ENST00000481690 VPS33BQ9H267 617 aa28.6■■■□□ 2.17
GPCPD1-206ENST00000481690 COL4A1P02462 1669 aa28.59■■■□□ 2.17
GPCPD1-206ENST00000481690 PNMA8AQ86V59 439 aaPredicted RBP28.59■■■□□ 2.17
GPCPD1-206ENST00000481690 TWISTNBQ3B726 338 aaPredicted RBP28.58■■■□□ 2.17
GPCPD1-206ENST00000481690 JMYQ8N9B5 988 aa28.58■■■□□ 2.17
GPCPD1-206ENST00000481690 CELF1Q92879 486 aaKnown RBP28.58■■■□□ 2.17
GPCPD1-206ENST00000481690 IL16Q14005 1332 aa28.58■■■□□ 2.17
GPCPD1-206ENST00000481690 DUOX1Q9NRD9 1551 aa28.58■■■□□ 2.17
GPCPD1-206ENST00000481690 CCDC191Q8NCU4 936 aa28.57■■■□□ 2.16
GPCPD1-206ENST00000481690 METTL22Q9BUU2 404 aaPredicted RBP28.57■■■□□ 2.16
GPCPD1-206ENST00000481690 CWC25Q9NXE8 425 aaPredicted RBP28.57■■■□□ 2.16
GPCPD1-206ENST00000481690 MAP3K2Q9Y2U5 619 aa28.57■■■□□ 2.16
GPCPD1-206ENST00000481690 ZNRF3Q9ULT6 936 aa28.56■■■□□ 2.16
GPCPD1-206ENST00000481690 SCNN1DP51172 638 aa28.55■■■□□ 2.16
GPCPD1-206ENST00000481690 KIAA2012Q0VF49 1180 aa28.55■■■□□ 2.16
GPCPD1-206ENST00000481690 JARID2Q92833 1246 aaPredicted RBP28.55■■■□□ 2.16
GPCPD1-206ENST00000481690 CREBZFQ9NS37 354 aa28.55■■■□□ 2.16
GPCPD1-206ENST00000481690 PASKQ96RG2 1323 aa28.54■■■□□ 2.16
GPCPD1-206ENST00000481690 PCCAP05165 728 aaPredicted RBP28.54■■■□□ 2.16
GPCPD1-206ENST00000481690 HSP90B1P14625 803 aaKnown RBP28.54■■■□□ 2.16
GPCPD1-206ENST00000481690 EPS15P42566 896 aa28.54■■■□□ 2.16
GPCPD1-206ENST00000481690 MAP1SQ66K74 1059 aaPredicted RBP28.54■■■□□ 2.16
GPCPD1-206ENST00000481690 NSFL1CQ9UNZ2 370 aaKnown RBP28.54■■■□□ 2.16
GPCPD1-206ENST00000481690 FANCIQ9NVI1 1328 aa28.53■■■□□ 2.16
GPCPD1-206ENST00000481690 PI4KAP2A4QPH2 592 aa28.53■■■□□ 2.16
GPCPD1-206ENST00000481690 NCBP3Q53F19 620 aaKnown RBP28.53■■■□□ 2.16
GPCPD1-206ENST00000481690 KSR2Q6VAB6 950 aa28.53■■■□□ 2.16
GPCPD1-206ENST00000481690 PI4KAP1Q8N8J0 262 aa28.53■■■□□ 2.16
GPCPD1-206ENST00000481690 MYH3P11055 1940 aa28.53■■■□□ 2.16
GPCPD1-206ENST00000481690 CACNA1FO60840 1977 aa28.52■■■□□ 2.16
GPCPD1-206ENST00000481690 CXCL9Q07325 125 aa28.52■■■□□ 2.16
GPCPD1-206ENST00000481690 FAM9BQ8IZU0 186 aa28.51■■■□□ 2.15
GPCPD1-206ENST00000481690 PDE8AO60658 829 aa28.5■■■□□ 2.15
GPCPD1-206ENST00000481690 ITGBL1O95965 494 aaPredicted RBP28.5■■■□□ 2.15
GPCPD1-206ENST00000481690 SLC4A2P04920 1241 aa28.5■■■□□ 2.15
GPCPD1-206ENST00000481690 RPS8P62241 208 aaKnown RBP28.5■■■□□ 2.15
GPCPD1-206ENST00000481690 GPSM2P81274 684 aa28.5■■■□□ 2.15
GPCPD1-206ENST00000481690 NEXNQ0ZGT2 675 aa28.5■■■□□ 2.15
GPCPD1-206ENST00000481690 CIAPIN1Q6FI81 312 aa28.5■■■□□ 2.15
GPCPD1-206ENST00000481690 G2E3Q7L622 706 aa28.5■■■□□ 2.15
GPCPD1-206ENST00000481690 CNTROBQ8N137 903 aa28.5■■■□□ 2.15
GPCPD1-206ENST00000481690 CCDC85AQ96PX6 553 aaPredicted RBP28.5■■■□□ 2.15
GPCPD1-206ENST00000481690 SEC31BQ9NQW1 1179 aa28.5■■■□□ 2.15
GPCPD1-206ENST00000481690 MKRN1Q9UHC7 482 aaKnown RBP28.5■■■□□ 2.15
GPCPD1-206ENST00000481690 SPEF2Q9C093 1822 aa28.49■■■□□ 2.15
GPCPD1-206ENST00000481690 C6orf229H3BNL8 230 aa28.49■■■□□ 2.15
GPCPD1-206ENST00000481690 RAD17O75943 681 aa28.49■■■□□ 2.15
GPCPD1-206ENST00000481690 CCDC152Q4G0S7 254 aa28.49■■■□□ 2.15
GPCPD1-206ENST00000481690 WDR63Q8IWG1 891 aa28.49■■■□□ 2.15
GPCPD1-206ENST00000481690 WASHC4Q2M389 1173 aa28.48■■■□□ 2.15
GPCPD1-206ENST00000481690 GPRC5DQ9NZD1 345 aa28.48■■■□□ 2.15
GPCPD1-206ENST00000481690 TMEM88BA6NKF7 163 aa28.47■■■□□ 2.15
GPCPD1-206ENST00000481690 RIMBP2O15034 1052 aa28.47■■■□□ 2.15
GPCPD1-206ENST00000481690 IGKV5-2P06315 115 aa28.47■■■□□ 2.15
GPCPD1-206ENST00000481690 GMPSP49915 693 aaPredicted RBP28.47■■■□□ 2.15
GPCPD1-206ENST00000481690 BCL2L13Q9BXK5 485 aa28.47■■■□□ 2.15
GPCPD1-206ENST00000481690 TNIP1Q15025 636 aa28.46■■■□□ 2.15
GPCPD1-206ENST00000481690 CWF19L2Q2TBE0 894 aaKnown RBP28.46■■■□□ 2.15
GPCPD1-206ENST00000481690 USP50Q70EL3 339 aaPredicted RBP28.46■■■□□ 2.15
GPCPD1-206ENST00000481690 POLLQ9UGP5 575 aa28.46■■■□□ 2.15
GPCPD1-206ENST00000481690 CDHR2Q9BYE9 1310 aa28.45■■■□□ 2.15
GPCPD1-206ENST00000481690 YDJCA8MPS7 323 aa28.45■■■□□ 2.14
GPCPD1-206ENST00000481690 EYA3Q99504 573 aa28.45■■■□□ 2.14
GPCPD1-206ENST00000481690 DBNDD1Q9H9R9 158 aa28.45■■■□□ 2.14
GPCPD1-206ENST00000481690 ADARB2Q9NS39 739 aaKnown RBP28.45■■■□□ 2.14
GPCPD1-206ENST00000481690 EXOSC9Q06265 439 aaKnown RBP28.44■■■□□ 2.14
GPCPD1-206ENST00000481690 FLIIQ13045 1269 aa28.44■■■□□ 2.14
GPCPD1-206ENST00000481690 GPR101Q96P66 508 aaPredicted RBP28.44■■■□□ 2.14
GPCPD1-206ENST00000481690 TRPM7Q96QT4 1865 aa28.43■■■□□ 2.14
GPCPD1-206ENST00000481690 FKBP5Q13451 457 aaPredicted RBP28.43■■■□□ 2.14
GPCPD1-206ENST00000481690 ANKIB1Q9P2G1 1089 aa28.43■■■□□ 2.14
GPCPD1-206ENST00000481690 CNTNAP1P78357 1384 aa28.42■■■□□ 2.14
GPCPD1-206ENST00000481690 NEURL1BA8MQ27 555 aa28.42■■■□□ 2.14
GPCPD1-206ENST00000481690 CTSWP56202 376 aa28.42■■■□□ 2.14
GPCPD1-206ENST00000481690 ANKRD18AQ8IVF6 992 aa28.42■■■□□ 2.14
GPCPD1-206ENST00000481690 TBC1D16Q8TBP0 767 aa28.42■■■□□ 2.14
GPCPD1-206ENST00000481690 VAMP4O75379 141 aa28.41■■■□□ 2.14
GPCPD1-206ENST00000481690 HSPA1AP0DMV8 641 aaKnown RBP28.41■■■□□ 2.14
GPCPD1-206ENST00000481690 HSPA1BP0DMV9 641 aaKnown RBP28.41■■■□□ 2.14
GPCPD1-206ENST00000481690 IFFO2Q5TF58 517 aa28.41■■■□□ 2.14
GPCPD1-206ENST00000481690 ECE2O60344 883 aa28.4■■■□□ 2.14
GPCPD1-206ENST00000481690 UFL1O94874 794 aa28.4■■■□□ 2.14
GPCPD1-206ENST00000481690 DOK7Q18PE1 504 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms