RNA–Protein interactions for RNA: ENST00000481238.1

TMED4-205, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 1 (best) BASIC

Gene TMED4, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-205ENST00000481238 SNX21Q969T3 373 aa27.62■■■□□ 2.01
TMED4-205ENST00000481238 CCNL1Q9UK58 526 aaPredicted RBP27.62■■■□□ 2.01
TMED4-205ENST00000481238 ATP5JP18859 108 aa27.61■■■□□ 2.01
TMED4-205ENST00000481238 PUS3Q9BZE2 481 aaKnown RBP27.61■■■□□ 2.01
TMED4-205ENST00000481238 SH3TC1Q8TE82 1336 aa27.61■■■□□ 2.01
TMED4-205ENST00000481238 EPB41L2O43491 1005 aaKnown RBP27.6■■■□□ 2.01
TMED4-205ENST00000481238 RPS6KA4O75676 772 aa27.6■■■□□ 2.01
TMED4-205ENST00000481238 BCL11BQ9C0K0 894 aaPredicted RBP27.6■■■□□ 2.01
TMED4-205ENST00000481238 TAF7LQ5H9L4 462 aa27.6■■■□□ 2.01
TMED4-205ENST00000481238 CCDC85AQ96PX6 553 aaPredicted RBP27.6■■■□□ 2.01
TMED4-205ENST00000481238 BOLA2Q9H3K6 86 aa27.6■■■□□ 2.01
TMED4-205ENST00000481238 NIP7Q9Y221 180 aaKnown RBP eCLIP27.6■■■□□ 2.01
TMED4-205ENST00000481238 DBNDD2Q9BQY9 259 aa27.59■■■□□ 2.01
TMED4-205ENST00000481238 ANKRD18BA2A2Z9 1011 aa27.58■■■□□ 2.01
TMED4-205ENST00000481238 ITGA6P23229 1130 aa27.58■■■□□ 2.01
TMED4-205ENST00000481238 GREM2Q9H772 168 aa27.58■■■□□ 2.01
TMED4-205ENST00000481238 CEP126Q9P2H0 1117 aa27.58■■■□□ 2.01
TMED4-205ENST00000481238 SGSM2O43147 1006 aa27.57■■■□□ 2
TMED4-205ENST00000481238 HSP90B1P14625 803 aaKnown RBP27.56■■■□□ 2
TMED4-205ENST00000481238 HSCBQ8IWL3 235 aa27.56■■■□□ 2
TMED4-205ENST00000481238 ANP32EQ9BTT0 268 aa27.56■■■□□ 2
TMED4-205ENST00000481238 SBF2Q86WG5 1849 aa27.56■■■□□ 2
TMED4-205ENST00000481238 NTSR2O95665 410 aa27.55■■■□□ 2
TMED4-205ENST00000481238 RABEP1Q15276 862 aa27.55■■■□□ 2
TMED4-205ENST00000481238 FAM196AQ6ZSG2 479 aa27.55■■■□□ 2
TMED4-205ENST00000481238 RUFY2Q8WXA3 655 aa27.55■■■□□ 2
TMED4-205ENST00000481238 ANO2Q9NQ90 1003 aa27.55■■■□□ 2
TMED4-205ENST00000481238 HIP1O00291 1037 aa27.55■■■□□ 2
TMED4-205ENST00000481238 TIMM10P62072 90 aa27.55■■■□□ 2
TMED4-205ENST00000481238 NEUROD6Q96NK8 337 aa27.55■■■□□ 2
TMED4-205ENST00000481238 DIAPH3Q9NSV4 1193 aa27.55■■■□□ 2
TMED4-205ENST00000481238 AKAP2Q9Y2D5 859 aa27.55■■■□□ 2
TMED4-205ENST00000481238 RIPOR2Q9Y4F9 1068 aa27.55■■■□□ 2
TMED4-205ENST00000481238 AK9Q5TCS8 1911 aa27.55■■■□□ 2
TMED4-205ENST00000481238 KRT27Q7Z3Y8 459 aa27.54■■■□□ 2
TMED4-205ENST00000481238 IL25Q9H293 177 aa27.54■■■□□ 2
TMED4-205ENST00000481238 NARFQ9UHQ1 456 aa27.54■■■□□ 2
TMED4-205ENST00000481238 A0A1B0GUL7 405 aa27.53■■■□□ 2
TMED4-205ENST00000481238 FAM177BA6PVY3 158 aa27.53■■■□□ 2
TMED4-205ENST00000481238 HCLS1P14317 486 aaPredicted RBP27.53■■■□□ 2
TMED4-205ENST00000481238 MCCP23508 829 aa27.53■■■□□ 2
TMED4-205ENST00000481238 CWC27Q6UX04 472 aaKnown RBP27.53■■■□□ 2
TMED4-205ENST00000481238 LDHAL6AQ6ZMR3 332 aa27.53■■■□□ 2
TMED4-205ENST00000481238 HAUS7Q99871 368 aa27.53■■■□□ 2
TMED4-205ENST00000481238 RTCBQ9Y3I0 505 aaKnown RBP27.53■■■□□ 2
TMED4-205ENST00000481238 LY75O60449 1722 aa27.52■■■□□ 2
TMED4-205ENST00000481238 BCORQ6W2J9 1755 aa27.52■■■□□ 2
TMED4-205ENST00000481238 ZNF609O15014 1411 aa27.52■■■□□ 2
TMED4-205ENST00000481238 GNPATO15228 680 aa27.52■■■□□ 2
TMED4-205ENST00000481238 ZNF772Q68DY9 489 aaPredicted RBP27.52■■■□□ 2
TMED4-205ENST00000481238 BCL2L12Q9HB09 334 aa27.5■■□□□ 1.99
TMED4-205ENST00000481238 MYH3P11055 1940 aa27.5■■□□□ 1.99
TMED4-205ENST00000481238 ANAPC15P60006 121 aa27.49■■□□□ 1.99
TMED4-205ENST00000481238 FSD1Q9BTV5 496 aa27.49■■□□□ 1.99
TMED4-205ENST00000481238 CNNM1Q9NRU3 951 aa27.49■■□□□ 1.99
TMED4-205ENST00000481238 RBM6P78332 1123 aaKnown RBP27.48■■□□□ 1.99
TMED4-205ENST00000481238 USPL1Q5W0Q7 1092 aa27.48■■□□□ 1.99
TMED4-205ENST00000481238 KIAA1211Q6ZU35 1233 aa27.48■■□□□ 1.99
TMED4-205ENST00000481238 SMIM5Q71RC9 77 aa27.48■■□□□ 1.99
TMED4-205ENST00000481238 IL17RAQ96F46 866 aa27.48■■□□□ 1.99
TMED4-205ENST00000481238 LSG1Q9H089 658 aaKnown RBP27.48■■□□□ 1.99
TMED4-205ENST00000481238 ZPR1O75312 459 aa27.48■■□□□ 1.99
TMED4-205ENST00000481238 METTL24Q5JXM2 366 aa27.48■■□□□ 1.99
TMED4-205ENST00000481238 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.48■■□□□ 1.99
TMED4-205ENST00000481238 CCDC152Q4G0S7 254 aa27.47■■□□□ 1.99
TMED4-205ENST00000481238 ARHGEF1Q92888 912 aaKnown RBP27.47■■□□□ 1.99
TMED4-205ENST00000481238 RTL9Q8NET4 1388 aa27.46■■□□□ 1.99
TMED4-205ENST00000481238 TBC1D9BQ66K14 1250 aa27.46■■□□□ 1.99
TMED4-205ENST00000481238 SNRKQ9NRH2 765 aa27.46■■□□□ 1.99
TMED4-205ENST00000481238 RAD50Q92878 1312 aa27.45■■□□□ 1.99
TMED4-205ENST00000481238 HSPA4P34932 840 aa27.45■■□□□ 1.99
TMED4-205ENST00000481238 TICAM2Q86XR7 235 aa27.45■■□□□ 1.99
TMED4-205ENST00000481238 LRRC4BQ9NT99 713 aa27.45■■□□□ 1.99
TMED4-205ENST00000481238 SRP68Q9UHB9 627 aaKnown RBP27.45■■□□□ 1.99
TMED4-205ENST00000481238 RIC1Q4ADV7 1423 aa27.45■■□□□ 1.98
TMED4-205ENST00000481238 RFX7Q2KHR2 1363 aa27.45■■□□□ 1.98
TMED4-205ENST00000481238 CD2BP2O95400 341 aaKnown RBP27.45■■□□□ 1.98
TMED4-205ENST00000481238 EDC3Q96F86 508 aaKnown RBP27.45■■□□□ 1.98
TMED4-205ENST00000481238 XAGE2Q96GT9 111 aa27.45■■□□□ 1.98
TMED4-205ENST00000481238 DNAJC2Q99543 621 aaKnown RBP27.45■■□□□ 1.98
TMED4-205ENST00000481238 NMIQ13287 307 aaPredicted RBP27.44■■□□□ 1.98
TMED4-205ENST00000481238 SLC27A3Q5K4L6 730 aa27.44■■□□□ 1.98
TMED4-205ENST00000481238 CCDC158Q5M9N0 1113 aa27.44■■□□□ 1.98
TMED4-205ENST00000481238 VGLL2Q8N8G2 317 aa27.44■■□□□ 1.98
TMED4-205ENST00000481238 SCN7AQ01118 1682 aa27.44■■□□□ 1.98
TMED4-205ENST00000481238 TAF1LQ8IZX4 1826 aa27.44■■□□□ 1.98
TMED4-205ENST00000481238 TRAPPC3LQ5T215 181 aa27.43■■□□□ 1.98
TMED4-205ENST00000481238 FAM227BQ96M60 508 aa27.43■■□□□ 1.98
TMED4-205ENST00000481238 ANTXR1Q9H6X2 564 aa27.43■■□□□ 1.98
TMED4-205ENST00000481238 MROH5Q6ZUA9 1318 aa27.43■■□□□ 1.98
TMED4-205ENST00000481238 K7ELQ4 463 aaPredicted RBP27.43■■□□□ 1.98
TMED4-205ENST00000481238 ATP2B3Q16720 1220 aa27.43■■□□□ 1.98
TMED4-205ENST00000481238 ERFEQ4G0M1 354 aa27.43■■□□□ 1.98
TMED4-205ENST00000481238 SLC10A5Q5PT55 438 aa27.43■■□□□ 1.98
TMED4-205ENST00000481238 AMIGO3Q86WK7 504 aa27.43■■□□□ 1.98
TMED4-205ENST00000481238 SETDB2Q96T68 719 aa27.43■■□□□ 1.98
TMED4-205ENST00000481238 TRIM37O94972 964 aa27.42■■□□□ 1.98
TMED4-205ENST00000481238 PDE8BO95263 885 aa27.42■■□□□ 1.98
TMED4-205ENST00000481238 IFIT1P09914 478 aaKnown RBP27.42■■□□□ 1.98
TMED4-205ENST00000481238 GORABQ5T7V8 394 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms