RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 MAP3K15Q6ZN16 1313 aa22.76■■□□□ 1.23
CCM2-214ENST00000481194 BEND3Q5T5X7 828 aa22.76■■□□□ 1.23
CCM2-214ENST00000481194 PLEKHM2Q8IWE5 1019 aa22.76■■□□□ 1.23
CCM2-214ENST00000481194 IFT172Q9UG01 1749 aa22.76■■□□□ 1.23
CCM2-214ENST00000481194 FOXD4L6Q3SYB3 417 aaPredicted RBP22.76■■□□□ 1.23
CCM2-214ENST00000481194 FOXD4L3Q6VB84 417 aaPredicted RBP22.76■■□□□ 1.23
CCM2-214ENST00000481194 IKQ13123 557 aaPredicted RBP22.75■■□□□ 1.23
CCM2-214ENST00000481194 SOS2Q07890 1332 aaPredicted RBP22.75■■□□□ 1.23
CCM2-214ENST00000481194 PAG1Q9NWQ8 432 aa22.75■■□□□ 1.23
CCM2-214ENST00000481194 ESYT1Q9BSJ8 1104 aa22.75■■□□□ 1.23
CCM2-214ENST00000481194 CCDC196A0A1B0GTZ2 297 aa22.75■■□□□ 1.23
CCM2-214ENST00000481194 ITGA6P23229 1130 aa22.75■■□□□ 1.23
CCM2-214ENST00000481194 EYA3Q99504 573 aa22.75■■□□□ 1.23
CCM2-214ENST00000481194 MST1RQ04912 1400 aa22.75■■□□□ 1.23
CCM2-214ENST00000481194 FAM89AQ96GI7 184 aa22.74■■□□□ 1.23
CCM2-214ENST00000481194 ZSCAN29Q8IWY8 852 aaPredicted RBP22.74■■□□□ 1.23
CCM2-214ENST00000481194 LETM1O95202 739 aaPredicted RBP22.74■■□□□ 1.23
CCM2-214ENST00000481194 TBC1D32Q96NH3 1257 aa22.74■■□□□ 1.23
CCM2-214ENST00000481194 CRNKL1Q9BZJ0 848 aaKnown RBP22.74■■□□□ 1.23
CCM2-214ENST00000481194 MCMDC2Q4G0Z9 681 aa22.74■■□□□ 1.23
CCM2-214ENST00000481194 JMYQ8N9B5 988 aa22.73■■□□□ 1.23
CCM2-214ENST00000481194 PCCAP05165 728 aaPredicted RBP22.73■■□□□ 1.23
CCM2-214ENST00000481194 FBXO3Q9UK99 471 aa22.73■■□□□ 1.23
CCM2-214ENST00000481194 MROH5Q6ZUA9 1318 aa22.73■■□□□ 1.23
CCM2-214ENST00000481194 NRKQ7Z2Y5 1582 aa22.73■■□□□ 1.23
CCM2-214ENST00000481194 GNAT2P19087 354 aa22.73■■□□□ 1.23
CCM2-214ENST00000481194 PUM3Q15397 648 aaKnown RBP22.73■■□□□ 1.23
CCM2-214ENST00000481194 KDM4FA0A1W2PPD8 638 aa22.72■■□□□ 1.23
CCM2-214ENST00000481194 DEKP35659 375 aaKnown RBP22.72■■□□□ 1.23
CCM2-214ENST00000481194 BAG6P46379 1132 aa22.72■■□□□ 1.23
CCM2-214ENST00000481194 KIF1AQ12756 1690 aa22.72■■□□□ 1.23
CCM2-214ENST00000481194 IQCA1Q86XH1 822 aa22.72■■□□□ 1.23
CCM2-214ENST00000481194 SNRKQ9NRH2 765 aa22.72■■□□□ 1.23
CCM2-214ENST00000481194 KIAA2012Q0VF49 1180 aa22.72■■□□□ 1.23
CCM2-214ENST00000481194 TNNI3KQ59H18 835 aa22.71■■□□□ 1.23
CCM2-214ENST00000481194 FPGT-TNNI3KV9GXZ4 949 aa22.71■■□□□ 1.23
CCM2-214ENST00000481194 FOSBP53539 338 aa22.71■■□□□ 1.23
CCM2-214ENST00000481194 LARP1BQ659C4 914 aaKnown RBP22.71■■□□□ 1.23
CCM2-214ENST00000481194 GOLGA6L19H0YKK7 550 aa22.71■■□□□ 1.23
CCM2-214ENST00000481194 APBA3O96018 575 aa22.71■■□□□ 1.23
CCM2-214ENST00000481194 NBPF7P0C2Y1 421 aaPredicted RBP22.71■■□□□ 1.23
CCM2-214ENST00000481194 ZBTB38Q8NAP3 1195 aaPredicted RBP22.71■■□□□ 1.23
CCM2-214ENST00000481194 MKNK2Q9HBH9 465 aa22.71■■□□□ 1.23
CCM2-214ENST00000481194 STK3Q13188 491 aa22.71■■□□□ 1.23
CCM2-214ENST00000481194 SSH3Q8TE77 659 aa22.71■■□□□ 1.23
CCM2-214ENST00000481194 NUP133Q8WUM0 1156 aa22.71■■□□□ 1.23
CCM2-214ENST00000481194 LIMCH1Q9UPQ0 1083 aa22.71■■□□□ 1.23
CCM2-214ENST00000481194 CPDO75976 1380 aa22.7■■□□□ 1.23
CCM2-214ENST00000481194 CYP27B1O15528 508 aa22.7■■□□□ 1.22
CCM2-214ENST00000481194 RXRBP28702 533 aa22.7■■□□□ 1.22
CCM2-214ENST00000481194 CCDC178Q5BJE1 867 aa22.7■■□□□ 1.22
CCM2-214ENST00000481194 MYO5BQ9ULV0 1848 aa22.7■■□□□ 1.22
CCM2-214ENST00000481194 RNF113AO15541 343 aaKnown RBP22.7■■□□□ 1.22
CCM2-214ENST00000481194 TSHZ3Q63HK5 1081 aa22.7■■□□□ 1.22
CCM2-214ENST00000481194 SKAP1Q86WV1 359 aa22.7■■□□□ 1.22
CCM2-214ENST00000481194 USP44Q9H0E7 712 aa22.7■■□□□ 1.22
CCM2-214ENST00000481194 MINDY4BA8MYZ0 360 aa22.69■■□□□ 1.22
CCM2-214ENST00000481194 DENND2AQ9ULE3 1009 aa22.69■■□□□ 1.22
CCM2-214ENST00000481194 ASAP1Q9ULH1 1129 aa22.69■■□□□ 1.22
CCM2-214ENST00000481194 SOGA3Q5TF21 947 aa22.69■■□□□ 1.22
CCM2-214ENST00000481194 TPM2P07951 284 aa22.69■■□□□ 1.22
CCM2-214ENST00000481194 KRT27Q7Z3Y8 459 aa22.69■■□□□ 1.22
CCM2-214ENST00000481194 NOL7Q9UMY1 257 aaKnown RBP22.69■■□□□ 1.22
CCM2-214ENST00000481194 ERVV-1B6SEH8 477 aa22.68■■□□□ 1.22
CCM2-214ENST00000481194 CRKLP46109 303 aaKnown RBP22.68■■□□□ 1.22
CCM2-214ENST00000481194 PDE4BQ07343 736 aa22.68■■□□□ 1.22
CCM2-214ENST00000481194 TPD52L1Q16890 204 aaPredicted RBP22.68■■□□□ 1.22
CCM2-214ENST00000481194 CRACR2BQ8N4Y2 399 aaPredicted RBP22.68■■□□□ 1.22
CCM2-214ENST00000481194 BECN2A8MW95 431 aa22.68■■□□□ 1.22
CCM2-214ENST00000481194 HMGN5P82970 282 aaKnown RBP22.68■■□□□ 1.22
CCM2-214ENST00000481194 PPP4R3BQ5MIZ7 849 aa22.68■■□□□ 1.22
CCM2-214ENST00000481194 ADGRB2O60241 1585 aa22.68■■□□□ 1.22
CCM2-214ENST00000481194 ZNF444Q8N0Y2 327 aaPredicted RBP22.68■■□□□ 1.22
CCM2-214ENST00000481194 NCOA7Q8NI08 942 aa22.68■■□□□ 1.22
CCM2-214ENST00000481194 C16orf71Q8IYS4 520 aaPredicted RBP22.67■■□□□ 1.22
CCM2-214ENST00000481194 CTSWP56202 376 aa22.67■■□□□ 1.22
CCM2-214ENST00000481194 CNNM2Q9H8M5 875 aa22.67■■□□□ 1.22
CCM2-214ENST00000481194 HELLSQ9NRZ9 838 aa22.67■■□□□ 1.22
CCM2-214ENST00000481194 MTMR7Q9Y216 660 aa22.67■■□□□ 1.22
CCM2-214ENST00000481194 KNDC1Q76NI1 1749 aa22.67■■□□□ 1.22
CCM2-214ENST00000481194 NFKBIBQ15653 356 aa22.67■■□□□ 1.22
CCM2-214ENST00000481194 CD163L1Q9NR16 1453 aa22.67■■□□□ 1.22
CCM2-214ENST00000481194 PLCG2P16885 1265 aa22.67■■□□□ 1.22
CCM2-214ENST00000481194 KRT85P78386 507 aa22.66■■□□□ 1.22
CCM2-214ENST00000481194 ATP2B2Q01814 1243 aa22.66■■□□□ 1.22
CCM2-214ENST00000481194 PIGBQ92521 554 aa22.66■■□□□ 1.22
CCM2-214ENST00000481194 NEK1Q96PY6 1258 aa22.66■■□□□ 1.22
CCM2-214ENST00000481194 KRT23Q9C075 422 aa22.66■■□□□ 1.22
CCM2-214ENST00000481194 KAT6BQ8WYB5 2073 aa22.66■■□□□ 1.22
CCM2-214ENST00000481194 CYP7A1P22680 504 aa22.66■■□□□ 1.22
CCM2-214ENST00000481194 NAA16Q6N069 864 aaPredicted RBP22.66■■□□□ 1.22
CCM2-214ENST00000481194 SASS6Q6UVJ0 657 aa22.66■■□□□ 1.22
CCM2-214ENST00000481194 GIGYF2Q6Y7W6 1299 aaKnown RBP22.66■■□□□ 1.22
CCM2-214ENST00000481194 GSE1Q14687 1217 aa22.66■■□□□ 1.22
CCM2-214ENST00000481194 HLA-DOAP06340 250 aa22.65■■□□□ 1.22
CCM2-214ENST00000481194 TTLL7Q6ZT98 887 aa22.65■■□□□ 1.22
CCM2-214ENST00000481194 HDAC9Q9UKV0 1011 aa22.65■■□□□ 1.22
CCM2-214ENST00000481194 A0A1B0GUL7 405 aa22.65■■□□□ 1.22
CCM2-214ENST00000481194 CLSTN1O94985 981 aa22.65■■□□□ 1.22
CCM2-214ENST00000481194 STK38Q15208 465 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms