RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 CCDC125Q86Z20 511 aa18.23■□□□□ 0.51
SNRNP200-205ENST00000480835 SALL3Q9BXA9 1300 aa18.23■□□□□ 0.51
SNRNP200-205ENST00000480835 ANKRD18BA2A2Z9 1011 aa18.22■□□□□ 0.51
SNRNP200-205ENST00000480835 BMP2KLQ5H9B9 411 aa18.22■□□□□ 0.51
SNRNP200-205ENST00000480835 TPTE2Q6XPS3 522 aa18.22■□□□□ 0.51
SNRNP200-205ENST00000480835 NBPF5PQ86XG9 351 aaPredicted RBP18.22■□□□□ 0.51
SNRNP200-205ENST00000480835 SIL1Q9H173 461 aa18.22■□□□□ 0.51
SNRNP200-205ENST00000480835 CASZ1Q86V15 1759 aa18.22■□□□□ 0.51
SNRNP200-205ENST00000480835 EYA2O00167 538 aa18.21■□□□□ 0.51
SNRNP200-205ENST00000480835 SASH1O94885 1247 aa18.21■□□□□ 0.51
SNRNP200-205ENST00000480835 GYS1P13807 737 aa18.21■□□□□ 0.51
SNRNP200-205ENST00000480835 HCLS1P14317 486 aaPredicted RBP18.21■□□□□ 0.51
SNRNP200-205ENST00000480835 GTF2E1P29083 439 aaPredicted RBP18.21■□□□□ 0.51
SNRNP200-205ENST00000480835 IL15P40933 162 aaPredicted RBP18.21■□□□□ 0.51
SNRNP200-205ENST00000480835 EN1Q05925 392 aaPredicted RBP18.21■□□□□ 0.51
SNRNP200-205ENST00000480835 EZH2Q15910 746 aaKnown RBP18.21■□□□□ 0.51
SNRNP200-205ENST00000480835 CCDC152Q4G0S7 254 aa18.21■□□□□ 0.51
SNRNP200-205ENST00000480835 TAF7LQ5H9L4 462 aa18.21■□□□□ 0.51
SNRNP200-205ENST00000480835 C16orf71Q8IYS4 520 aaPredicted RBP18.21■□□□□ 0.51
SNRNP200-205ENST00000480835 KLHDC4Q8TBB5 520 aa18.21■□□□□ 0.51
SNRNP200-205ENST00000480835 IL1RAPL2Q9NP60 686 aa18.21■□□□□ 0.51
SNRNP200-205ENST00000480835 STAP2Q9UGK3 403 aa18.21■□□□□ 0.51
SNRNP200-205ENST00000480835 MX1P20591 662 aa18.2■□□□□ 0.5
SNRNP200-205ENST00000480835 ITGA6P23229 1130 aa18.2■□□□□ 0.5
SNRNP200-205ENST00000480835 PDE1AP54750 535 aa18.2■□□□□ 0.5
SNRNP200-205ENST00000480835 NFIXQ14938 502 aa18.2■□□□□ 0.5
SNRNP200-205ENST00000480835 NUTM1Q86Y26 1132 aa18.2■□□□□ 0.5
SNRNP200-205ENST00000480835 BACH2Q9BYV9 841 aa18.2■□□□□ 0.5
SNRNP200-205ENST00000480835 RIC1Q4ADV7 1423 aa18.2■□□□□ 0.5
SNRNP200-205ENST00000480835 ERFEQ4G0M1 354 aa18.19■□□□□ 0.5
SNRNP200-205ENST00000480835 TTC22Q5TAA0 569 aa18.19■□□□□ 0.5
SNRNP200-205ENST00000480835 OTUD7AQ8TE49 926 aaPredicted RBP18.19■□□□□ 0.5
SNRNP200-205ENST00000480835 GPATCH3Q96I76 525 aa18.19■□□□□ 0.5
SNRNP200-205ENST00000480835 GREM2Q9H772 168 aa18.19■□□□□ 0.5
SNRNP200-205ENST00000480835 GPR108Q9NPR9 543 aa18.19■□□□□ 0.5
SNRNP200-205ENST00000480835 STK32BQ9NY57 414 aa18.19■□□□□ 0.5
SNRNP200-205ENST00000480835 IFIT2P09913 472 aaKnown RBP18.18■□□□□ 0.5
SNRNP200-205ENST00000480835 TM4SF1P30408 202 aa18.18■□□□□ 0.5
SNRNP200-205ENST00000480835 SF3B3Q15393 1217 aaKnown RBP18.18■□□□□ 0.5
SNRNP200-205ENST00000480835 ATG9AQ7Z3C6 839 aa18.18■□□□□ 0.5
SNRNP200-205ENST00000480835 NLGN1Q8N2Q7 840 aa18.18■□□□□ 0.5
SNRNP200-205ENST00000480835 TSHZ2Q9NRE2 1034 aa18.18■□□□□ 0.5
SNRNP200-205ENST00000480835 LRP5O75197 1615 aa18.18■□□□□ 0.5
SNRNP200-205ENST00000480835 TTC41PQ6P2S7 1318 aa18.18■□□□□ 0.5
SNRNP200-205ENST00000480835 C8orf34Q49A92 452 aa18.17■□□□□ 0.5
SNRNP200-205ENST00000480835 COL23A1Q86Y22 540 aaPredicted RBP18.17■□□□□ 0.5
SNRNP200-205ENST00000480835 ZNF594Q96JF6 807 aaPredicted RBP18.17■□□□□ 0.5
SNRNP200-205ENST00000480835 BCL11AQ9H165 835 aa18.17■□□□□ 0.5
SNRNP200-205ENST00000480835 ABCC12Q96J65 1359 aa18.17■□□□□ 0.5
SNRNP200-205ENST00000480835 TFCP2Q12800 502 aa18.16■□□□□ 0.5
SNRNP200-205ENST00000480835 SLC15A2Q16348 729 aa18.16■□□□□ 0.5
SNRNP200-205ENST00000480835 AACSQ86V21 672 aa18.16■□□□□ 0.5
SNRNP200-205ENST00000480835 NLRP3Q96P20 1036 aa18.16■□□□□ 0.5
SNRNP200-205ENST00000480835 CCDC85AQ96PX6 553 aaPredicted RBP18.16■□□□□ 0.5
SNRNP200-205ENST00000480835 PNPLA7Q6ZV29 1317 aa18.16■□□□□ 0.5
SNRNP200-205ENST00000480835 ERC2O15083 957 aa18.15■□□□□ 0.5
SNRNP200-205ENST00000480835 NPHP1O15259 732 aa18.15■□□□□ 0.5
SNRNP200-205ENST00000480835 CNBD1Q8NA66 436 aa18.15■□□□□ 0.5
SNRNP200-205ENST00000480835 CDC5LQ99459 802 aaKnown RBP18.15■□□□□ 0.5
SNRNP200-205ENST00000480835 CEP126Q9P2H0 1117 aa18.15■□□□□ 0.5
SNRNP200-205ENST00000480835 MSH5O43196 834 aa18.14■□□□□ 0.49
SNRNP200-205ENST00000480835 LRRC24Q50LG9 513 aa18.14■□□□□ 0.49
SNRNP200-205ENST00000480835 TNNI3KQ59H18 835 aa18.14■□□□□ 0.49
SNRNP200-205ENST00000480835 LDHAL6AQ6ZMR3 332 aa18.14■□□□□ 0.49
SNRNP200-205ENST00000480835 EAF2Q96CJ1 260 aaPredicted RBP18.14■□□□□ 0.49
SNRNP200-205ENST00000480835 AKAP2Q9Y2D5 859 aa18.14■□□□□ 0.49
SNRNP200-205ENST00000480835 RIPOR2Q9Y4F9 1068 aa18.14■□□□□ 0.49
SNRNP200-205ENST00000480835 FPGT-TNNI3KV9GXZ4 949 aa18.14■□□□□ 0.49
SNRNP200-205ENST00000480835 EP400Q96L91 3159 aa18.14■□□□□ 0.49
SNRNP200-205ENST00000480835 NRXN2Q9P2S2 1712 aa18.13■□□□□ 0.49
SNRNP200-205ENST00000480835 SERPINB2P05120 415 aa18.13■□□□□ 0.49
SNRNP200-205ENST00000480835 GSPT1P15170 499 aaKnown RBP18.13■□□□□ 0.49
SNRNP200-205ENST00000480835 IGHMBP2P38935 993 aaKnown RBP18.13■□□□□ 0.49
SNRNP200-205ENST00000480835 ST5P78524 1137 aa18.13■□□□□ 0.49
SNRNP200-205ENST00000480835 PUS3Q9BZE2 481 aaKnown RBP18.13■□□□□ 0.49
SNRNP200-205ENST00000480835 ANO8Q9HCE9 1232 aaPredicted RBP18.13■□□□□ 0.49
SNRNP200-205ENST00000480835 CNNM1Q9NRU3 951 aa18.13■□□□□ 0.49
SNRNP200-205ENST00000480835 ECHDC1Q9NTX5 307 aa18.13■□□□□ 0.49
SNRNP200-205ENST00000480835 SPEF2Q9C093 1822 aa18.13■□□□□ 0.49
SNRNP200-205ENST00000480835 AK9Q5TCS8 1911 aa18.13■□□□□ 0.49
SNRNP200-205ENST00000480835 POLRMTO00411 1230 aaKnown RBP18.12■□□□□ 0.49
SNRNP200-205ENST00000480835 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
SNRNP200-205ENST00000480835 GLRX3O76003 335 aaKnown RBP18.12■□□□□ 0.49
SNRNP200-205ENST00000480835 PRR5LQ6MZQ0 368 aa18.12■□□□□ 0.49
SNRNP200-205ENST00000480835 DEFB132Q7Z7B7 95 aa18.12■□□□□ 0.49
SNRNP200-205ENST00000480835 MPHOSPH8Q99549 860 aa18.12■□□□□ 0.49
SNRNP200-205ENST00000480835 ZNF609O15014 1411 aa18.12■□□□□ 0.49
SNRNP200-205ENST00000480835 METTL24Q5JXM2 366 aa18.11■□□□□ 0.49
SNRNP200-205ENST00000480835 PI4K2BQ8TCG2 481 aa18.11■□□□□ 0.49
SNRNP200-205ENST00000480835 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.11■□□□□ 0.49
SNRNP200-205ENST00000480835 MROH5Q6ZUA9 1318 aa18.11■□□□□ 0.49
SNRNP200-205ENST00000480835 TNRC6CQ9HCJ0 1690 aaKnown RBP18.1■□□□□ 0.49
SNRNP200-205ENST00000480835 CDC45O75419 566 aa18.1■□□□□ 0.49
SNRNP200-205ENST00000480835 SDSP20132 328 aa18.1■□□□□ 0.49
SNRNP200-205ENST00000480835 DDR1Q08345 913 aa18.1■□□□□ 0.49
SNRNP200-205ENST00000480835 ANKRD18AQ8IVF6 992 aa18.1■□□□□ 0.49
SNRNP200-205ENST00000480835 CCDC8Q9H0W5 538 aaPredicted RBP18.1■□□□□ 0.49
SNRNP200-205ENST00000480835 SEC31BQ9NQW1 1179 aa18.1■□□□□ 0.49
SNRNP200-205ENST00000480835 C3orf67Q6ZVT6 689 aa18.09■□□□□ 0.49
SNRNP200-205ENST00000480835 DBNLQ9UJU6 430 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms