RNA–Protein interactions for RNA: ENST00000480830.5

SGSM3-210, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 997 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-210ENST00000480830 ALDH1B1P30837 517 aa22.82■■□□□ 1.24
SGSM3-210ENST00000480830 SF3B3Q15393 1217 aaKnown RBP22.82■■□□□ 1.24
SGSM3-210ENST00000480830 FRAT1Q92837 279 aaPredicted RBP22.82■■□□□ 1.24
SGSM3-210ENST00000480830 SRCIN1Q9C0H9 1055 aa22.82■■□□□ 1.24
SGSM3-210ENST00000480830 CTSWP56202 376 aa22.81■■□□□ 1.24
SGSM3-210ENST00000480830 C9orf131Q5VYM1 1079 aa22.81■■□□□ 1.24
SGSM3-210ENST00000480830 DDX46Q7L014 1031 aaKnown RBP22.81■■□□□ 1.24
SGSM3-210ENST00000480830 EPHA10Q5JZY3 1008 aa22.8■■□□□ 1.24
SGSM3-210ENST00000480830 SNED1Q8TER0 1413 aa22.8■■□□□ 1.24
SGSM3-210ENST00000480830 GRM8O00222 908 aa22.79■■□□□ 1.24
SGSM3-210ENST00000480830 BRPF1P55201 1214 aaPredicted RBP22.79■■□□□ 1.24
SGSM3-210ENST00000480830 GRAPQ13588 217 aa22.79■■□□□ 1.24
SGSM3-210ENST00000480830 CCDC93Q567U6 631 aa22.79■■□□□ 1.24
SGSM3-210ENST00000480830 GRAPLQ8TC17 118 aaPredicted RBP22.79■■□□□ 1.24
SGSM3-210ENST00000480830 GREM2Q9H772 168 aa22.79■■□□□ 1.24
SGSM3-210ENST00000480830 RNF181Q9P0P0 153 aa22.79■■□□□ 1.24
SGSM3-210ENST00000480830 ALDH1L1O75891 902 aa22.78■■□□□ 1.24
SGSM3-210ENST00000480830 NBPF7P0C2Y1 421 aaPredicted RBP22.78■■□□□ 1.24
SGSM3-210ENST00000480830 TTLL11Q8NHH1 800 aa22.78■■□□□ 1.24
SGSM3-210ENST00000480830 TIAM2Q8IVF5 1701 aa22.77■■□□□ 1.24
SGSM3-210ENST00000480830 ZNF784Q8NCA9 323 aaPredicted RBP22.77■■□□□ 1.24
SGSM3-210ENST00000480830 CLUAP1Q96AJ1 413 aa22.77■■□□□ 1.24
SGSM3-210ENST00000480830 SUCLG2Q96I99 432 aa22.77■■□□□ 1.24
SGSM3-210ENST00000480830 ZNF277Q9NRM2 450 aaPredicted RBP22.77■■□□□ 1.24
SGSM3-210ENST00000480830 C9orf78Q9NZ63 289 aaPredicted RBP22.77■■□□□ 1.24
SGSM3-210ENST00000480830 KIF16BQ96L93 1317 aa22.77■■□□□ 1.24
SGSM3-210ENST00000480830 LRRC37AA6NMS7 1700 aa22.77■■□□□ 1.23
SGSM3-210ENST00000480830 TRIM27P14373 513 aa22.76■■□□□ 1.23
SGSM3-210ENST00000480830 FOXO4P98177 505 aa22.76■■□□□ 1.23
SGSM3-210ENST00000480830 FAM161AQ3B820 660 aa22.76■■□□□ 1.23
SGSM3-210ENST00000480830 ZNF526Q8TF50 670 aaPredicted RBP22.76■■□□□ 1.23
SGSM3-210ENST00000480830 TAOK3Q9H2K8 898 aa22.76■■□□□ 1.23
SGSM3-210ENST00000480830 CCDC152Q4G0S7 254 aa22.75■■□□□ 1.23
SGSM3-210ENST00000480830 KAZALD1Q96I82 304 aa22.75■■□□□ 1.23
SGSM3-210ENST00000480830 API5Q9BZZ5 524 aaKnown RBP22.75■■□□□ 1.23
SGSM3-210ENST00000480830 ATP6V0A2Q9Y487 856 aa22.75■■□□□ 1.23
SGSM3-210ENST00000480830 PLA2G12BQ9BX93 195 aa22.74■■□□□ 1.23
SGSM3-210ENST00000480830 DICER1Q9UPY3 1922 aaKnown RBP22.74■■□□□ 1.23
SGSM3-210ENST00000480830 COL4A5P29400 1685 aa22.74■■□□□ 1.23
SGSM3-210ENST00000480830 DUOX1Q9NRD9 1551 aa22.73■■□□□ 1.23
SGSM3-210ENST00000480830 USP44Q9H0E7 712 aa22.73■■□□□ 1.23
SGSM3-210ENST00000480830 CHMP3Q9Y3E7 222 aa22.73■■□□□ 1.23
SGSM3-210ENST00000480830 BBOX1O75936 387 aa22.72■■□□□ 1.23
SGSM3-210ENST00000480830 LMNB1P20700 586 aa22.72■■□□□ 1.23
SGSM3-210ENST00000480830 RPS8P62241 208 aaKnown RBP22.72■■□□□ 1.23
SGSM3-210ENST00000480830 FKBP4Q02790 459 aaKnown RBP eCLIP22.72■■□□□ 1.23
SGSM3-210ENST00000480830 LMBR1LQ6UX01 489 aa22.72■■□□□ 1.23
SGSM3-210ENST00000480830 GPR101Q96P66 508 aaPredicted RBP22.72■■□□□ 1.23
SGSM3-210ENST00000480830 SOGA3Q5TF21 947 aa22.71■■□□□ 1.23
SGSM3-210ENST00000480830 ATF7IPQ6VMQ6 1270 aa22.71■■□□□ 1.23
SGSM3-210ENST00000480830 CSF1RP07333 972 aa22.7■■□□□ 1.22
SGSM3-210ENST00000480830 RLBP1P12271 317 aa22.7■■□□□ 1.22
SGSM3-210ENST00000480830 HSP90B1P14625 803 aaKnown RBP22.7■■□□□ 1.22
SGSM3-210ENST00000480830 ITGA6P23229 1130 aa22.7■■□□□ 1.22
SGSM3-210ENST00000480830 GPSM2P81274 684 aa22.7■■□□□ 1.22
SGSM3-210ENST00000480830 SP8Q8IXZ3 490 aa22.7■■□□□ 1.22
SGSM3-210ENST00000480830 RTKN2Q8IZC4 609 aa22.7■■□□□ 1.22
SGSM3-210ENST00000480830 BICC1Q9H694 974 aaKnown RBP22.7■■□□□ 1.22
SGSM3-210ENST00000480830 UTYO14607 1347 aa22.7■■□□□ 1.22
SGSM3-210ENST00000480830 LTBP3Q9NS15 1303 aa22.7■■□□□ 1.22
SGSM3-210ENST00000480830 LTBP1Q14766 1721 aa22.69■■□□□ 1.22
SGSM3-210ENST00000480830 CCT4P50991 539 aaKnown RBP22.69■■□□□ 1.22
SGSM3-210ENST00000480830 ZKSCAN2Q63HK3 967 aa22.69■■□□□ 1.22
SGSM3-210ENST00000480830 ARHGAP45Q92619 1136 aa22.69■■□□□ 1.22
SGSM3-210ENST00000480830 ZNF594Q96JF6 807 aaPredicted RBP22.69■■□□□ 1.22
SGSM3-210ENST00000480830 MEIS3Q99687 375 aa22.69■■□□□ 1.22
SGSM3-210ENST00000480830 WTIPA6NIX2 430 aaPredicted RBP22.68■■□□□ 1.22
SGSM3-210ENST00000480830 PLIN1O60240 522 aa22.68■■□□□ 1.22
SGSM3-210ENST00000480830 ANKRD18AQ8IVF6 992 aa22.68■■□□□ 1.22
SGSM3-210ENST00000480830 TMEM57Q8N5G2 664 aa22.68■■□□□ 1.22
SGSM3-210ENST00000480830 ANKRD44Q8N8A2 993 aa22.68■■□□□ 1.22
SGSM3-210ENST00000480830 RCAN3Q9UKA8 241 aa22.68■■□□□ 1.22
SGSM3-210ENST00000480830 RTL9Q8NET4 1388 aa22.67■■□□□ 1.22
SGSM3-210ENST00000480830 IPO8O15397 1037 aaKnown RBP22.67■■□□□ 1.22
SGSM3-210ENST00000480830 DPP8Q6V1X1 898 aaPredicted RBP22.67■■□□□ 1.22
SGSM3-210ENST00000480830 MPNDQ8N594 471 aa22.67■■□□□ 1.22
SGSM3-210ENST00000480830 IARSP41252 1262 aaKnown RBP22.66■■□□□ 1.22
SGSM3-210ENST00000480830 AOC3Q16853 763 aa22.66■■□□□ 1.22
SGSM3-210ENST00000480830 INTS3Q68E01 1043 aaKnown RBP22.66■■□□□ 1.22
SGSM3-210ENST00000480830 CC2D2BQ6DHV5 1058 aa22.66■■□□□ 1.22
SGSM3-210ENST00000480830 PSMD1Q99460 953 aa22.66■■□□□ 1.22
SGSM3-210ENST00000480830 NSFL1CQ9UNZ2 370 aaKnown RBP22.66■■□□□ 1.22
SGSM3-210ENST00000480830 PANK1Q8TE04 598 aa22.65■■□□□ 1.22
SGSM3-210ENST00000480830 CDC5LQ99459 802 aaKnown RBP22.65■■□□□ 1.22
SGSM3-210ENST00000480830 A0A1B0GUL6 1792 aa22.65■■□□□ 1.22
SGSM3-210ENST00000480830 POLLQ9UGP5 575 aa22.64■■□□□ 1.21
SGSM3-210ENST00000480830 LRRFIP2Q9Y608 721 aaKnown RBP22.64■■□□□ 1.21
SGSM3-210ENST00000480830 ZNF541Q9H0D2 1346 aa22.63■■□□□ 1.21
SGSM3-210ENST00000480830 UBTFL1P0CB47 393 aaPredicted RBP22.63■■□□□ 1.21
SGSM3-210ENST00000480830 TMX4Q9H1E5 349 aaPredicted RBP22.63■■□□□ 1.21
SGSM3-210ENST00000480830 ANKRD18BA2A2Z9 1011 aa22.62■■□□□ 1.21
SGSM3-210ENST00000480830 RIMBP2O15034 1052 aa22.62■■□□□ 1.21
SGSM3-210ENST00000480830 PPIP5K2O43314 1243 aa22.62■■□□□ 1.21
SGSM3-210ENST00000480830 IFIT5Q13325 482 aaKnown RBP22.62■■□□□ 1.21
SGSM3-210ENST00000480830 KLHDC4Q8TBB5 520 aa22.62■■□□□ 1.21
SGSM3-210ENST00000480830 MINPP1Q9UNW1 487 aa22.62■■□□□ 1.21
SGSM3-210ENST00000480830 C6orf229H3BNL8 230 aa22.61■■□□□ 1.21
SGSM3-210ENST00000480830 SNAP23O00161 211 aa22.61■■□□□ 1.21
SGSM3-210ENST00000480830 IGHMBP2P38935 993 aaKnown RBP22.61■■□□□ 1.21
SGSM3-210ENST00000480830 RABL6Q3YEC7 729 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms