RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 PATL2C9JE40 543 aaKnown RBP9.66□□□□□ -0.86
CALD1-219ENST00000480638 RARAP10276 462 aa9.66□□□□□ -0.86
CALD1-219ENST00000480638 TARSP26639 723 aaKnown RBP9.66□□□□□ -0.86
CALD1-219ENST00000480638 ARHGAP4P98171 946 aa9.66□□□□□ -0.86
CALD1-219ENST00000480638 AAMPQ13685 434 aa9.66□□□□□ -0.86
CALD1-219ENST00000480638 POLIQ9UNA4 740 aa9.66□□□□□ -0.86
CALD1-219ENST00000480638 ELOA3CA0A087WX78 387 aaPredicted RBP9.65□□□□□ -0.86
CALD1-219ENST00000480638 ELOA3DA6NLF2 546 aaPredicted RBP9.65□□□□□ -0.86
CALD1-219ENST00000480638 ELOA3BQ3SY89 546 aa9.65□□□□□ -0.86
CALD1-219ENST00000480638 AEBP1Q8IUX7 1158 aa9.65□□□□□ -0.86
CALD1-219ENST00000480638 ELOA3Q8NG57 546 aa9.65□□□□□ -0.86
CALD1-219ENST00000480638 ENAMQ9NRM1 1142 aa9.65□□□□□ -0.86
CALD1-219ENST00000480638 CCDC87Q9NVE4 849 aa9.65□□□□□ -0.86
CALD1-219ENST00000480638 FNDC3AQ9Y2H6 1198 aaKnown RBP9.65□□□□□ -0.86
CALD1-219ENST00000480638 MAP3K6O95382 1288 aa9.64□□□□□ -0.87
CALD1-219ENST00000480638 PCSK2P16519 638 aa9.64□□□□□ -0.87
CALD1-219ENST00000480638 ADH7P40394 386 aa9.64□□□□□ -0.87
CALD1-219ENST00000480638 NLRP13Q86W25 1043 aa9.64□□□□□ -0.87
CALD1-219ENST00000480638 HOMEZQ8IX15 550 aa9.64□□□□□ -0.87
CALD1-219ENST00000480638 UBE2OQ9C0C9 1292 aaKnown RBP9.64□□□□□ -0.87
CALD1-219ENST00000480638 STK17AQ9UEE5 414 aa9.64□□□□□ -0.87
CALD1-219ENST00000480638 RPLP1P05386 114 aaKnown RBP9.63□□□□□ -0.87
CALD1-219ENST00000480638 TBC1D8BQ0IIM8 1120 aa9.63□□□□□ -0.87
CALD1-219ENST00000480638 DHX32Q7L7V1 743 aaKnown RBP9.63□□□□□ -0.87
CALD1-219ENST00000480638 KCTD17Q8N5Z5 321 aa9.63□□□□□ -0.87
CALD1-219ENST00000480638 NEDD1Q8NHV4 660 aa9.63□□□□□ -0.87
CALD1-219ENST00000480638 FAM181BA6NEQ2 426 aa9.62□□□□□ -0.87
CALD1-219ENST00000480638 PDE12Q6L8Q7 609 aaKnown RBP9.62□□□□□ -0.87
CALD1-219ENST00000480638 CHSY3Q70JA7 882 aa9.62□□□□□ -0.87
CALD1-219ENST00000480638 GGNBP2Q9H3C7 697 aa9.62□□□□□ -0.87
CALD1-219ENST00000480638 IGFLR1Q9H665 355 aa9.62□□□□□ -0.87
CALD1-219ENST00000480638 DNAJB12Q9NXW2 375 aaKnown RBP9.62□□□□□ -0.87
CALD1-219ENST00000480638 A6NHS1 94 aa9.61□□□□□ -0.87
CALD1-219ENST00000480638 MMP20O60882 483 aa9.61□□□□□ -0.87
CALD1-219ENST00000480638 C8orf34Q49A92 452 aa9.61□□□□□ -0.87
CALD1-219ENST00000480638 GJD3Q8N144 294 aa9.61□□□□□ -0.87
CALD1-219ENST00000480638 BTBD6Q96KE9 485 aa9.61□□□□□ -0.87
CALD1-219ENST00000480638 ADAMTS8Q9UP79 889 aa9.61□□□□□ -0.87
CALD1-219ENST00000480638 ALAS2P22557 587 aa9.6□□□□□ -0.87
CALD1-219ENST00000480638 AMPD1P23109 780 aa9.6□□□□□ -0.87
CALD1-219ENST00000480638 USP5P45974 858 aa9.6□□□□□ -0.87
CALD1-219ENST00000480638 ZNF438Q7Z4V0 828 aa9.6□□□□□ -0.87
CALD1-219ENST00000480638 TLR7Q9NYK1 1049 aaKnown RBP9.6□□□□□ -0.87
CALD1-219ENST00000480638 TMEM63CQ9P1W3 806 aa9.6□□□□□ -0.87
CALD1-219ENST00000480638 BIN2Q9UBW5 565 aaPredicted RBP9.6□□□□□ -0.87
CALD1-219ENST00000480638 BRPF3Q9ULD4 1205 aa9.6□□□□□ -0.87
CALD1-219ENST00000480638 SLC6A14Q9UN76 642 aa9.6□□□□□ -0.87
CALD1-219ENST00000480638 NDUFB5O43674 189 aa9.59□□□□□ -0.87
CALD1-219ENST00000480638 GPLD1P80108 840 aa9.59□□□□□ -0.87
CALD1-219ENST00000480638 XKR5Q6UX68 686 aa9.59□□□□□ -0.87
CALD1-219ENST00000480638 TTC16Q8NEE8 873 aa9.59□□□□□ -0.87
CALD1-219ENST00000480638 TRPM4Q8TD43 1214 aa9.59□□□□□ -0.87
CALD1-219ENST00000480638 ELP3Q9H9T3 547 aa9.59□□□□□ -0.87
CALD1-219ENST00000480638 ABI2Q9NYB9 513 aaPredicted RBP9.59□□□□□ -0.87
CALD1-219ENST00000480638 ZBTB42B2RXF5 422 aa9.58□□□□□ -0.88
CALD1-219ENST00000480638 PSAPP07602 524 aa9.58□□□□□ -0.88
CALD1-219ENST00000480638 HOXB4P17483 251 aaPredicted RBP9.58□□□□□ -0.88
CALD1-219ENST00000480638 SOX18P35713 384 aa9.58□□□□□ -0.88
CALD1-219ENST00000480638 NRLP54845 237 aa9.58□□□□□ -0.88
CALD1-219ENST00000480638 EHHADHQ08426 723 aa9.58□□□□□ -0.88
CALD1-219ENST00000480638 NAGPAQ9UK23 515 aa9.58□□□□□ -0.88
CALD1-219ENST00000480638 HOXD8P13378 290 aaPredicted RBP9.57□□□□□ -0.88
CALD1-219ENST00000480638 MLLT1Q03111 559 aaPredicted RBP9.57□□□□□ -0.88
CALD1-219ENST00000480638 PLAURQ03405 335 aa9.57□□□□□ -0.88
CALD1-219ENST00000480638 PCSK7Q16549 785 aa9.57□□□□□ -0.88
CALD1-219ENST00000480638 KANK3Q6NY19 840 aa9.57□□□□□ -0.88
CALD1-219ENST00000480638 OR13H1Q8NG92 308 aa9.57□□□□□ -0.88
CALD1-219ENST00000480638 STARD13Q9Y3M8 1113 aa9.57□□□□□ -0.88
CALD1-219ENST00000480638 DGKGP49619 791 aa9.56□□□□□ -0.88
CALD1-219ENST00000480638 TTC39BQ5VTQ0 682 aaPredicted RBP9.56□□□□□ -0.88
CALD1-219ENST00000480638 NSUN5Q96P11 429 aaKnown RBP9.56□□□□□ -0.88
CALD1-219ENST00000480638 RRAGCQ9HB90 399 aa9.56□□□□□ -0.88
CALD1-219ENST00000480638 ALBP02768 609 aa9.55□□□□□ -0.88
CALD1-219ENST00000480638 MARSP56192 900 aaKnown RBP9.55□□□□□ -0.88
CALD1-219ENST00000480638 SNRPNP63162 240 aaKnown RBP9.55□□□□□ -0.88
CALD1-219ENST00000480638 FAM35AQ86V20 835 aa9.55□□□□□ -0.88
CALD1-219ENST00000480638 FAM129BQ96TA1 746 aa9.55□□□□□ -0.88
CALD1-219ENST00000480638 DCTN4Q9UJW0 460 aa9.55□□□□□ -0.88
CALD1-219ENST00000480638 CPB1P15086 417 aa9.54□□□□□ -0.88
CALD1-219ENST00000480638 CITED4Q96RK1 184 aa9.54□□□□□ -0.88
CALD1-219ENST00000480638 CNTN3Q9P232 1028 aa9.54□□□□□ -0.88
CALD1-219ENST00000480638 M0R082 166 aa9.53□□□□□ -0.88
CALD1-219ENST00000480638 TNFRSF21O75509 655 aa9.53□□□□□ -0.88
CALD1-219ENST00000480638 CYP2E1P05181 493 aaPredicted RBP9.53□□□□□ -0.88
CALD1-219ENST00000480638 COL13A1Q5TAT6 717 aaPredicted RBP9.53□□□□□ -0.88
CALD1-219ENST00000480638 C20orf204Q6ZNR8 217 aa9.53□□□□□ -0.88
CALD1-219ENST00000480638 HFE2Q6ZVN8 426 aa9.53□□□□□ -0.88
CALD1-219ENST00000480638 C1orf127Q8N9H9 656 aa9.53□□□□□ -0.88
CALD1-219ENST00000480638 ZNF417Q8TAU3 575 aa9.53□□□□□ -0.88
CALD1-219ENST00000480638 SNX29Q8TEQ0 813 aa9.53□□□□□ -0.88
CALD1-219ENST00000480638 ZNF587Q96SQ5 575 aaPredicted RBP9.53□□□□□ -0.88
CALD1-219ENST00000480638 RBCK1Q9BYM8 510 aa9.53□□□□□ -0.88
CALD1-219ENST00000480638 CHRDQ9H2X0 955 aa9.53□□□□□ -0.88
CALD1-219ENST00000480638 PHF20L1A8MW92 1017 aa9.52□□□□□ -0.89
CALD1-219ENST00000480638 MAPK1P28482 360 aa9.52□□□□□ -0.89
CALD1-219ENST00000480638 PDE3BQ13370 1112 aa9.52□□□□□ -0.89
CALD1-219ENST00000480638 PERM1Q5SV97 790 aa9.52□□□□□ -0.89
CALD1-219ENST00000480638 PSAPL1Q6NUJ1 521 aa9.52□□□□□ -0.89
CALD1-219ENST00000480638 SND1Q7KZF4 910 aaKnown RBP eCLIP9.52□□□□□ -0.89
CALD1-219ENST00000480638 PODNQ7Z5L7 613 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms