RNA–Protein interactions for RNA: ENST00000480342.5

RERE-213, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-213ENST00000480342 ANO6Q4KMQ2 910 aa11.79□□□□□ -0.52
RERE-213ENST00000480342 IFNL2Q8IZJ0 200 aa11.79□□□□□ -0.52
RERE-213ENST00000480342 IL17RAQ96F46 866 aa11.79□□□□□ -0.52
RERE-213ENST00000480342 TRIM5Q9C035 493 aa11.79□□□□□ -0.52
RERE-213ENST00000480342 NUP62CLQ9H1M0 184 aa11.79□□□□□ -0.52
RERE-213ENST00000480342 DACT1Q9NYF0 836 aa11.79□□□□□ -0.52
RERE-213ENST00000480342 CICQ96RK0 1608 aaPredicted RBP11.78□□□□□ -0.52
RERE-213ENST00000480342 AOX1Q06278 1338 aa11.78□□□□□ -0.52
RERE-213ENST00000480342 PCDH11XQ9BZA7 1347 aa11.78□□□□□ -0.52
RERE-213ENST00000480342 PCDH11YQ9BZA8 1340 aa11.78□□□□□ -0.52
RERE-213ENST00000480342 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.78□□□□□ -0.52
RERE-213ENST00000480342 TYRO3Q06418 890 aa11.78□□□□□ -0.52
RERE-213ENST00000480342 ZNF592Q92610 1267 aa11.78□□□□□ -0.52
RERE-213ENST00000480342 PRDM11Q9NQV5 511 aa11.78□□□□□ -0.52
RERE-213ENST00000480342 FAM200AQ8TCP9 573 aa11.78□□□□□ -0.52
RERE-213ENST00000480342 DCAF5Q96JK2 942 aa11.78□□□□□ -0.52
RERE-213ENST00000480342 FAM227BQ96M60 508 aa11.78□□□□□ -0.52
RERE-213ENST00000480342 TNMDQ9H2S6 317 aa11.78□□□□□ -0.52
RERE-213ENST00000480342 CHPF2Q9P2E5 772 aa11.78□□□□□ -0.52
RERE-213ENST00000480342 MRVI1Q9Y6F6 885 aa11.78□□□□□ -0.52
RERE-213ENST00000480342 ZKSCAN1P17029 563 aaPredicted RBP11.77□□□□□ -0.52
RERE-213ENST00000480342 ZC3H6P61129 1189 aaKnown RBP11.77□□□□□ -0.52
RERE-213ENST00000480342 KRT85P78386 507 aa11.77□□□□□ -0.52
RERE-213ENST00000480342 VPS53Q5VIR6 699 aa11.77□□□□□ -0.52
RERE-213ENST00000480342 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.53
RERE-213ENST00000480342 IFIT2P09913 472 aaKnown RBP11.77□□□□□ -0.53
RERE-213ENST00000480342 POLA2Q14181 598 aa11.77□□□□□ -0.53
RERE-213ENST00000480342 CLASRPQ8N2M8 674 aaKnown RBP11.77□□□□□ -0.53
RERE-213ENST00000480342 RUFY2Q8WXA3 655 aa11.77□□□□□ -0.53
RERE-213ENST00000480342 DISP2A7MBM2 1401 aa11.76□□□□□ -0.53
RERE-213ENST00000480342 A0A0U1RQG5 324 aaPredicted RBP11.76□□□□□ -0.53
RERE-213ENST00000480342 GLRX3O76003 335 aaKnown RBP11.76□□□□□ -0.53
RERE-213ENST00000480342 CEBPZQ03701 1054 aaKnown RBP11.76□□□□□ -0.53
RERE-213ENST00000480342 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
RERE-213ENST00000480342 CBX8Q9HC52 389 aa11.76□□□□□ -0.53
RERE-213ENST00000480342 RBM8AQ9Y5S9 174 aaKnown RBP11.76□□□□□ -0.53
RERE-213ENST00000480342 PHKG2P15735 406 aa11.76□□□□□ -0.53
RERE-213ENST00000480342 EIF4A1P60842 406 aaKnown RBP11.76□□□□□ -0.53
RERE-213ENST00000480342 SPATA32Q96LK8 384 aa11.76□□□□□ -0.53
RERE-213ENST00000480342 CDCA7Q9BWT1 371 aaPredicted RBP11.76□□□□□ -0.53
RERE-213ENST00000480342 ZSWIM6Q9HCJ5 1215 aa11.76□□□□□ -0.53
RERE-213ENST00000480342 NLRP2Q9NX02 1062 aa11.76□□□□□ -0.53
RERE-213ENST00000480342 TAF6LQ9Y6J9 622 aa11.76□□□□□ -0.53
RERE-213ENST00000480342 GLI3P10071 1580 aa11.76□□□□□ -0.53
RERE-213ENST00000480342 C5P01031 1676 aa11.76□□□□□ -0.53
RERE-213ENST00000480342 KCNQ3O43525 872 aa11.75□□□□□ -0.53
RERE-213ENST00000480342 CSB-PGBD3P0DP91 1061 aa11.75□□□□□ -0.53
RERE-213ENST00000480342 FOSBP53539 338 aa11.75□□□□□ -0.53
RERE-213ENST00000480342 AACSQ86V21 672 aa11.75□□□□□ -0.53
RERE-213ENST00000480342 BICD2Q8TD16 824 aa11.75□□□□□ -0.53
RERE-213ENST00000480342 DDX11Q96FC9 970 aa11.75□□□□□ -0.53
RERE-213ENST00000480342 TUBGCP6Q96RT7 1819 aa11.75□□□□□ -0.53
RERE-213ENST00000480342 TPM3P06753 285 aa11.75□□□□□ -0.53
RERE-213ENST00000480342 CREB3L3Q68CJ9 461 aa11.75□□□□□ -0.53
RERE-213ENST00000480342 LARP1Q6PKG0 1096 aaKnown RBP11.75□□□□□ -0.53
RERE-213ENST00000480342 DNAAF4Q8WXU2 420 aa11.75□□□□□ -0.53
RERE-213ENST00000480342 ZSCAN31Q96LW9 406 aaPredicted RBP11.75□□□□□ -0.53
RERE-213ENST00000480342 CCDC8Q9H0W5 538 aaPredicted RBP11.75□□□□□ -0.53
RERE-213ENST00000480342 DNAJC25Q9H1X3 360 aa11.75□□□□□ -0.53
RERE-213ENST00000480342 SH2B1Q9NRF2 756 aaPredicted RBP11.75□□□□□ -0.53
RERE-213ENST00000480342 C9orf78Q9NZ63 289 aaPredicted RBP11.75□□□□□ -0.53
RERE-213ENST00000480342 EPB41L2O43491 1005 aaKnown RBP11.74□□□□□ -0.53
RERE-213ENST00000480342 TOM1O60784 492 aa11.74□□□□□ -0.53
RERE-213ENST00000480342 TNNT1P13805 278 aa11.74□□□□□ -0.53
RERE-213ENST00000480342 UTP14CQ5TAP6 766 aaKnown RBP11.74□□□□□ -0.53
RERE-213ENST00000480342 SIL1Q9H173 461 aa11.74□□□□□ -0.53
RERE-213ENST00000480342 ECHDC1Q9NTX5 307 aa11.74□□□□□ -0.53
RERE-213ENST00000480342 ERVV-2B6SEH9 535 aa11.74□□□□□ -0.53
RERE-213ENST00000480342 NR1I2O75469 434 aa11.74□□□□□ -0.53
RERE-213ENST00000480342 NMIQ13287 307 aaPredicted RBP11.74□□□□□ -0.53
RERE-213ENST00000480342 TPD52L1Q16890 204 aaPredicted RBP11.74□□□□□ -0.53
RERE-213ENST00000480342 BEND3Q5T5X7 828 aa11.74□□□□□ -0.53
RERE-213ENST00000480342 FBXW7Q969H0 707 aa11.74□□□□□ -0.53
RERE-213ENST00000480342 SLC52A2Q9HAB3 445 aa11.74□□□□□ -0.53
RERE-213ENST00000480342 LGR6Q9HBX8 967 aa11.74□□□□□ -0.53
RERE-213ENST00000480342 HDAC5Q9UQL6 1122 aa11.74□□□□□ -0.53
RERE-213ENST00000480342 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.74□□□□□ -0.53
RERE-213ENST00000480342 A0A087WWV3 80 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 BTBD11A6QL63 1104 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 PPFIA3O75145 1194 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 NCBP1Q09161 790 aaKnown RBP11.73□□□□□ -0.53
RERE-213ENST00000480342 NECTIN1Q15223 517 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 DDX17Q92841 729 aaKnown RBP11.73□□□□□ -0.53
RERE-213ENST00000480342 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.73□□□□□ -0.533e-6■□□□□ 9.3
RERE-213ENST00000480342 V9GYY5 206 aaPredicted RBP11.73□□□□□ -0.53
RERE-213ENST00000480342 CCDC171Q6TFL3 1326 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 ZNF831Q5JPB2 1677 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 ZNF165P49910 485 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 CWF19L2Q2TBE0 894 aaKnown RBP11.73□□□□□ -0.53
RERE-213ENST00000480342 ZSCAN25Q6NSZ9 544 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 ANKRD7Q92527 254 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 BOLA2Q9H3K6 86 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 CLIP2Q9UDT6 1046 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 THRAP3Q9Y2W1 955 aaKnown RBP11.73□□□□□ -0.53
RERE-213ENST00000480342 TNS2Q63HR2 1409 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 IL2RBP14784 551 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 ARID5BQ14865 1188 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 HSP90AB4PQ58FF6 505 aa11.73□□□□□ -0.53
RERE-213ENST00000480342 TOGARAM1Q9Y4F4 1720 aa11.72□□□□□ -0.53
RERE-213ENST00000480342 SLC27A2O14975 620 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms