RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 CNBD1Q8NA66 436 aa8.03□□□□□ -1.12
HERC4-210ENST00000480158 CARMIL3Q8ND23 1372 aa8.03□□□□□ -1.12
HERC4-210ENST00000480158 AFDNP55196 1824 aaKnown RBP8.03□□□□□ -1.12
HERC4-210ENST00000480158 PNMA6EA0A0J9YXQ4 647 aa8.03□□□□□ -1.12
HERC4-210ENST00000480158 APBB1O00213 710 aa8.03□□□□□ -1.12
HERC4-210ENST00000480158 POLRMTO00411 1230 aaKnown RBP8.03□□□□□ -1.12
HERC4-210ENST00000480158 SRGAP3O43295 1099 aa8.03□□□□□ -1.12
HERC4-210ENST00000480158 IGHDP01880 384 aa8.03□□□□□ -1.12
HERC4-210ENST00000480158 CEP85Q6P2H3 762 aa8.03□□□□□ -1.12
HERC4-210ENST00000480158 LMBR1LQ6UX01 489 aa8.03□□□□□ -1.12
HERC4-210ENST00000480158 SIRT2Q8IXJ6 389 aa8.03□□□□□ -1.12
HERC4-210ENST00000480158 PPP4R2Q9NY27 417 aa8.03□□□□□ -1.12
HERC4-210ENST00000480158 PARP3Q9Y6F1 533 aa8.03□□□□□ -1.12
HERC4-210ENST00000480158 SCN7AQ01118 1682 aa8.02□□□□□ -1.12
HERC4-210ENST00000480158 UTYO14607 1347 aa8.02□□□□□ -1.12
HERC4-210ENST00000480158 FOXO4P98177 505 aa8.02□□□□□ -1.13
HERC4-210ENST00000480158 PRR5LQ6MZQ0 368 aa8.02□□□□□ -1.13
HERC4-210ENST00000480158 C3orf67Q6ZVT6 689 aa8.02□□□□□ -1.13
HERC4-210ENST00000480158 KLHDC4Q8TBB5 520 aa8.02□□□□□ -1.13
HERC4-210ENST00000480158 NYXQ9GZU5 481 aa8.02□□□□□ -1.13
HERC4-210ENST00000480158 PPP1R1BQ9UD71 204 aaPredicted RBP8.02□□□□□ -1.13
HERC4-210ENST00000480158 BCORQ6W2J9 1755 aa8.02□□□□□ -1.13
HERC4-210ENST00000480158 ANKRD44Q8N8A2 993 aa8.02□□□□□ -1.13
HERC4-210ENST00000480158 ABCC12Q96J65 1359 aa8.02□□□□□ -1.13
HERC4-210ENST00000480158 SIL1Q9H173 461 aa8.01□□□□□ -1.13
HERC4-210ENST00000480158 PA2G4Q9UQ80 394 aaKnown RBP8.01□□□□□ -1.13
HERC4-210ENST00000480158 PDE8AO60658 829 aa8.01□□□□□ -1.13
HERC4-210ENST00000480158 ST5P78524 1137 aa8.01□□□□□ -1.13
HERC4-210ENST00000480158 FAM161AQ3B820 660 aa8.01□□□□□ -1.13
HERC4-210ENST00000480158 ZNF594Q96JF6 807 aaPredicted RBP8.01□□□□□ -1.13
HERC4-210ENST00000480158 GREM2Q9H772 168 aa8.01□□□□□ -1.13
HERC4-210ENST00000480158 SSUH2Q9Y2M2 353 aa8.01□□□□□ -1.13
HERC4-210ENST00000480158 ANKRD36CQ5JPF3 1778 aa8□□□□□ -1.13
HERC4-210ENST00000480158 CTSWP56202 376 aa8□□□□□ -1.13
HERC4-210ENST00000480158 ATP8B2P98198 1209 aa8□□□□□ -1.13
HERC4-210ENST00000480158 RPAP2Q8IXW5 612 aaPredicted RBP8□□□□□ -1.13
HERC4-210ENST00000480158 PELP1Q8IZL8 1130 aaKnown RBP8□□□□□ -1.13
HERC4-210ENST00000480158 TTLL11Q8NHH1 800 aa8□□□□□ -1.13
HERC4-210ENST00000480158 NLRP3Q96P20 1036 aa8□□□□□ -1.13
HERC4-210ENST00000480158 RWDD1Q9H446 243 aaPredicted RBP8□□□□□ -1.13
HERC4-210ENST00000480158 SEC31BQ9NQW1 1179 aa8□□□□□ -1.13
HERC4-210ENST00000480158 WWC3Q9ULE0 1092 aa8□□□□□ -1.13
HERC4-210ENST00000480158 HDAC5Q9UQL6 1122 aa8□□□□□ -1.13
HERC4-210ENST00000480158 EXOC6BQ9Y2D4 811 aa8□□□□□ -1.13
HERC4-210ENST00000480158 CDHR2Q9BYE9 1310 aa8□□□□□ -1.13
HERC4-210ENST00000480158 ERICH6BQ5W0A0 696 aa8□□□□□ -1.13
HERC4-210ENST00000480158 SKAP1Q86WV1 359 aa8□□□□□ -1.13
HERC4-210ENST00000480158 SLC16A10Q8TF71 515 aa8□□□□□ -1.13
HERC4-210ENST00000480158 MTFR1LQ9H019 292 aa8□□□□□ -1.13
HERC4-210ENST00000480158 ZBTB47Q9UFB7 747 aaPredicted RBP8□□□□□ -1.13
HERC4-210ENST00000480158 ABCB7O75027 752 aa7.99□□□□□ -1.13
HERC4-210ENST00000480158 SURF6O75683 361 aaKnown RBP7.99□□□□□ -1.13
HERC4-210ENST00000480158 ITGA6P23229 1130 aa7.99□□□□□ -1.13
HERC4-210ENST00000480158 AAMPQ13685 434 aa7.99□□□□□ -1.13
HERC4-210ENST00000480158 CCDC57Q2TAC2 916 aa7.99□□□□□ -1.13
HERC4-210ENST00000480158 TAF7LQ5H9L4 462 aa7.99□□□□□ -1.13
HERC4-210ENST00000480158 UTRNP46939 3433 aa7.99□□□□□ -1.13
HERC4-210ENST00000480158 SPDYE2BA6NHP3 402 aa7.99□□□□□ -1.13
HERC4-210ENST00000480158 SOCS7O14512 581 aa7.99□□□□□ -1.13
HERC4-210ENST00000480158 HMMRO75330 724 aa7.99□□□□□ -1.13
HERC4-210ENST00000480158 SPDYE6P0CI01 402 aa7.99□□□□□ -1.13
HERC4-210ENST00000480158 POLD1P28340 1107 aa7.99□□□□□ -1.13
HERC4-210ENST00000480158 IFIT5Q13325 482 aaKnown RBP7.99□□□□□ -1.13
HERC4-210ENST00000480158 OS9Q13438 667 aaPredicted RBP7.99□□□□□ -1.13
HERC4-210ENST00000480158 RABL6Q3YEC7 729 aaPredicted RBP7.99□□□□□ -1.13
HERC4-210ENST00000480158 SPDYE2Q495Y8 402 aa7.99□□□□□ -1.13
HERC4-210ENST00000480158 N4BP2Q86UW6 1770 aaPredicted RBP7.98□□□□□ -1.13
HERC4-210ENST00000480158 CSF1RP07333 972 aa7.98□□□□□ -1.13
HERC4-210ENST00000480158 CCDC152Q4G0S7 254 aa7.98□□□□□ -1.13
HERC4-210ENST00000480158 SLC10A5Q5PT55 438 aa7.98□□□□□ -1.13
HERC4-210ENST00000480158 SSH3Q8TE77 659 aa7.98□□□□□ -1.13
HERC4-210ENST00000480158 PLA2G12BQ9BX93 195 aa7.98□□□□□ -1.13
HERC4-210ENST00000480158 ANKRD18BA2A2Z9 1011 aa7.98□□□□□ -1.13
HERC4-210ENST00000480158 HSP90B1P14625 803 aaKnown RBP7.98□□□□□ -1.13
HERC4-210ENST00000480158 CHRNA5P30532 468 aa7.98□□□□□ -1.13
HERC4-210ENST00000480158 HDAC1Q13547 482 aaPredicted RBP7.98□□□□□ -1.13
HERC4-210ENST00000480158 SLC51AQ86UW1 340 aa7.98□□□□□ -1.13
HERC4-210ENST00000480158 RPGRQ92834 1020 aaKnown RBP7.98□□□□□ -1.13
HERC4-210ENST00000480158 PUS3Q9BZE2 481 aaKnown RBP7.98□□□□□ -1.13
HERC4-210ENST00000480158 SMARCA5O60264 1052 aaPredicted RBP7.97□□□□□ -1.13
HERC4-210ENST00000480158 PTPN12Q05209 780 aaKnown RBP7.97□□□□□ -1.13
HERC4-210ENST00000480158 MTX1Q13505 466 aa7.97□□□□□ -1.13
HERC4-210ENST00000480158 LRRC24Q50LG9 513 aa7.97□□□□□ -1.13
HERC4-210ENST00000480158 ANKRD45Q5TZF3 282 aa7.97□□□□□ -1.13
HERC4-210ENST00000480158 BRIP1Q9BX63 1249 aa7.97□□□□□ -1.13
HERC4-210ENST00000480158 RNF39Q9H2S5 420 aa7.97□□□□□ -1.13
HERC4-210ENST00000480158 RFX5P48382 616 aaPredicted RBP7.97□□□□□ -1.13
HERC4-210ENST00000480158 TMEM132AQ24JP5 1023 aa7.97□□□□□ -1.13
HERC4-210ENST00000480158 LDHAL6AQ6ZMR3 332 aa7.97□□□□□ -1.13
HERC4-210ENST00000480158 DDX46Q7L014 1031 aaKnown RBP7.97□□□□□ -1.13
HERC4-210ENST00000480158 CELF1Q92879 486 aaKnown RBP7.97□□□□□ -1.13
HERC4-210ENST00000480158 ZNF622Q969S3 477 aaKnown RBP eCLIP7.97□□□□□ -1.13
HERC4-210ENST00000480158 IBTKQ9P2D0 1353 aaPredicted RBP7.96□□□□□ -1.13
HERC4-210ENST00000480158 A0A0G2JLW4 131 aa7.96□□□□□ -1.14
HERC4-210ENST00000480158 PTGER2P43116 358 aa7.96□□□□□ -1.14
HERC4-210ENST00000480158 G3BP1Q13283 466 aaKnown RBP eCLIP7.96□□□□□ -1.14
HERC4-210ENST00000480158 SF3B3Q15393 1217 aaKnown RBP7.96□□□□□ -1.14
HERC4-210ENST00000480158 C2CD5Q86YS7 1000 aa7.96□□□□□ -1.14
HERC4-210ENST00000480158 HELBQ8NG08 1087 aaPredicted RBP7.96□□□□□ -1.14
HERC4-210ENST00000480158 MPHOSPH8Q99549 860 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms