RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 SRCIN1Q9C0H9 1055 aa12.15□□□□□ -0.46
CD46-214ENST00000480003 MTFR1LQ9H019 292 aa12.15□□□□□ -0.46
CD46-214ENST00000480003 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.15□□□□□ -0.46
CD46-214ENST00000480003 IBTKQ9P2D0 1353 aaPredicted RBP12.15□□□□□ -0.46
CD46-214ENST00000480003 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
CD46-214ENST00000480003 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
CD46-214ENST00000480003 H7C1W4 665 aa12.14□□□□□ -0.47
CD46-214ENST00000480003 POLRMTO00411 1230 aaKnown RBP12.14□□□□□ -0.47
CD46-214ENST00000480003 GPTP24298 496 aa12.14□□□□□ -0.47
CD46-214ENST00000480003 CCT4P50991 539 aaKnown RBP12.14□□□□□ -0.47
CD46-214ENST00000480003 DDR1Q08345 913 aa12.14□□□□□ -0.47
CD46-214ENST00000480003 GCKRQ14397 625 aa12.14□□□□□ -0.47
CD46-214ENST00000480003 CWF19L2Q2TBE0 894 aaKnown RBP12.14□□□□□ -0.47
CD46-214ENST00000480003 BICDL1Q6ZP65 573 aa12.14□□□□□ -0.47
CD46-214ENST00000480003 TMEM57Q8N5G2 664 aa12.14□□□□□ -0.47
CD46-214ENST00000480003 PANK1Q8TE04 598 aa12.14□□□□□ -0.47
CD46-214ENST00000480003 FAM163AQ96GL9 167 aaPredicted RBP12.14□□□□□ -0.47
CD46-214ENST00000480003 USP44Q9H0E7 712 aa12.14□□□□□ -0.47
CD46-214ENST00000480003 ZBTB7BO15156 539 aaPredicted RBP12.13□□□□□ -0.47
CD46-214ENST00000480003 ZBTB7AO95365 584 aa12.13□□□□□ -0.47
CD46-214ENST00000480003 SERPINB2P05120 415 aa12.13□□□□□ -0.47
CD46-214ENST00000480003 CASP7P55210 303 aa12.13□□□□□ -0.47
CD46-214ENST00000480003 SLC10A5Q5PT55 438 aa12.13□□□□□ -0.47
CD46-214ENST00000480003 MSL1Q68DK7 614 aa12.13□□□□□ -0.47
CD46-214ENST00000480003 POTEGQ6S5H5 508 aa12.13□□□□□ -0.47
CD46-214ENST00000480003 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
CD46-214ENST00000480003 PPP1R42Q7Z4L9 355 aa12.13□□□□□ -0.47
CD46-214ENST00000480003 CWC25Q9NXE8 425 aaPredicted RBP12.13□□□□□ -0.47
CD46-214ENST00000480003 UTYO14607 1347 aa12.12□□□□□ -0.47
CD46-214ENST00000480003 NUP98P52948 1817 aa12.12□□□□□ -0.47
CD46-214ENST00000480003 NTSR2O95665 410 aa12.12□□□□□ -0.47
CD46-214ENST00000480003 PCCAP05165 728 aaPredicted RBP12.12□□□□□ -0.47
CD46-214ENST00000480003 MMP10P09238 476 aa12.12□□□□□ -0.47
CD46-214ENST00000480003 PTGER2P43116 358 aa12.12□□□□□ -0.47
CD46-214ENST00000480003 TPTE2Q6XPS3 522 aa12.12□□□□□ -0.47
CD46-214ENST00000480003 SYNE4Q8N205 404 aa12.12□□□□□ -0.47
CD46-214ENST00000480003 ZBTB38Q8NAP3 1195 aaPredicted RBP12.12□□□□□ -0.47
CD46-214ENST00000480003 UTP14AQ9BVJ6 771 aaKnown RBP12.12□□□□□ -0.47
CD46-214ENST00000480003 PPP1R1BQ9UD71 204 aaPredicted RBP12.12□□□□□ -0.47
CD46-214ENST00000480003 FTSJ3Q8IY81 847 aaKnown RBP12.11□□□□□ -0.47
CD46-214ENST00000480003 SPON1Q9HCB6 807 aa12.11□□□□□ -0.47
CD46-214ENST00000480003 TRMT112Q9UI30 125 aaKnown RBP12.11□□□□□ -0.47
CD46-214ENST00000480003 PARP3Q9Y6F1 533 aa12.11□□□□□ -0.47
CD46-214ENST00000480003 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
CD46-214ENST00000480003 NBPF7P0C2Y1 421 aaPredicted RBP12.1□□□□□ -0.47
CD46-214ENST00000480003 YY1P25490 414 aa12.1□□□□□ -0.47
CD46-214ENST00000480003 MVPQ14764 893 aaKnown RBP12.1□□□□□ -0.47
CD46-214ENST00000480003 PRR5LQ6MZQ0 368 aa12.1□□□□□ -0.47
CD46-214ENST00000480003 JARID2Q92833 1246 aaPredicted RBP12.1□□□□□ -0.47
CD46-214ENST00000480003 FAM89AQ96GI7 184 aa12.1□□□□□ -0.47
CD46-214ENST00000480003 NYXQ9GZU5 481 aa12.1□□□□□ -0.47
CD46-214ENST00000480003 COG6Q9Y2V7 657 aa12.1□□□□□ -0.47
CD46-214ENST00000480003 PXDNLA1KZ92 1463 aa12.09□□□□□ -0.47
CD46-214ENST00000480003 CARMIL3Q8ND23 1372 aa12.09□□□□□ -0.47
CD46-214ENST00000480003 KLRG2A4D1S0 409 aaPredicted RBP12.09□□□□□ -0.47
CD46-214ENST00000480003 FAM177BA6PVY3 158 aa12.09□□□□□ -0.47
CD46-214ENST00000480003 GRM8O00222 908 aa12.09□□□□□ -0.47
CD46-214ENST00000480003 NBPF5PQ86XG9 351 aaPredicted RBP12.09□□□□□ -0.47
CD46-214ENST00000480003 KAZALD1Q96I82 304 aa12.09□□□□□ -0.47
CD46-214ENST00000480003 PLA2G12BQ9BX93 195 aa12.09□□□□□ -0.47
CD46-214ENST00000480003 C9orf78Q9NZ63 289 aaPredicted RBP12.09□□□□□ -0.47
CD46-214ENST00000480003 CASZ1Q86V15 1759 aa12.09□□□□□ -0.47
CD46-214ENST00000480003 SH3TC1Q8TE82 1336 aa12.09□□□□□ -0.47
CD46-214ENST00000480003 CDHR2Q9BYE9 1310 aa12.09□□□□□ -0.47
CD46-214ENST00000480003 BCORQ6W2J9 1755 aa12.08□□□□□ -0.48
CD46-214ENST00000480003 ERFEQ4G0M1 354 aa12.08□□□□□ -0.48
CD46-214ENST00000480003 NUTM1Q86Y26 1132 aa12.08□□□□□ -0.48
CD46-214ENST00000480003 ITPRIPQ8IWB1 547 aa12.08□□□□□ -0.48
CD46-214ENST00000480003 MEIS3Q99687 375 aa12.08□□□□□ -0.48
CD46-214ENST00000480003 ZBTB40Q9NUA8 1239 aa12.08□□□□□ -0.48
CD46-214ENST00000480003 DDX19BQ9UMR2 479 aa12.08□□□□□ -0.48
CD46-214ENST00000480003 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.48
CD46-214ENST00000480003 SCN7AQ01118 1682 aa12.07□□□□□ -0.48
CD46-214ENST00000480003 IRS4O14654 1257 aaPredicted RBP12.07□□□□□ -0.48
CD46-214ENST00000480003 CSF1RP07333 972 aa12.07□□□□□ -0.48
CD46-214ENST00000480003 GNAI3P08754 354 aa12.07□□□□□ -0.48
CD46-214ENST00000480003 POLD1P28340 1107 aa12.07□□□□□ -0.48
CD46-214ENST00000480003 UBE3BQ7Z3V4 1068 aa12.07□□□□□ -0.48
CD46-214ENST00000480003 BRIP1Q9BX63 1249 aa12.07□□□□□ -0.48
CD46-214ENST00000480003 TAOK2Q9UL54 1235 aa12.07□□□□□ -0.48
CD46-214ENST00000480003 ARFGEF2Q9Y6D5 1785 aa12.07□□□□□ -0.48
CD46-214ENST00000480003 COL24A1Q17RW2 1714 aa12.06□□□□□ -0.48
CD46-214ENST00000480003 PDE8AO60658 829 aa12.06□□□□□ -0.48
CD46-214ENST00000480003 HCLS1P14317 486 aaPredicted RBP12.06□□□□□ -0.48
CD46-214ENST00000480003 GTF2E1P29083 439 aaPredicted RBP12.06□□□□□ -0.48
CD46-214ENST00000480003 FOXO4P98177 505 aa12.06□□□□□ -0.48
CD46-214ENST00000480003 SF3B3Q15393 1217 aaKnown RBP12.06□□□□□ -0.48
CD46-214ENST00000480003 RTL5Q5HYW3 569 aaPredicted RBP12.06□□□□□ -0.48
CD46-214ENST00000480003 EPHA10Q5JZY3 1008 aa12.06□□□□□ -0.48
CD46-214ENST00000480003 CCDC24Q8N4L8 307 aa12.06□□□□□ -0.48
CD46-214ENST00000480003 CNBD1Q8NA66 436 aa12.06□□□□□ -0.48
CD46-214ENST00000480003 SUCLG2Q96I99 432 aa12.06□□□□□ -0.48
CD46-214ENST00000480003 CRBNQ96SW2 442 aa12.06□□□□□ -0.48
CD46-214ENST00000480003 TTLL11Q8NHH1 800 aa12.05□□□□□ -0.48
CD46-214ENST00000480003 CHMP4BQ9H444 224 aaKnown RBP12.05□□□□□ -0.48
CD46-214ENST00000480003 HDAC5Q9UQL6 1122 aa12.05□□□□□ -0.48
CD46-214ENST00000480003 UBTFL1P0CB47 393 aaPredicted RBP12.04□□□□□ -0.48
CD46-214ENST00000480003 HSP90B1P14625 803 aaKnown RBP12.04□□□□□ -0.48
CD46-214ENST00000480003 ST5P78524 1137 aa12.04□□□□□ -0.48
CD46-214ENST00000480003 RABL6Q3YEC7 729 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms