RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 TIMM10P62072 90 aa15.64■□□□□ 0.09
SEC13-216ENST00000479868 SYTL4Q96C24 671 aaPredicted RBP15.64■□□□□ 0.09
SEC13-216ENST00000479868 NEUROD6Q96NK8 337 aa15.64■□□□□ 0.09
SEC13-216ENST00000479868 HAUS7Q99871 368 aa15.64■□□□□ 0.09
SEC13-216ENST00000479868 TM6SF1Q9BZW5 370 aa15.64■□□□□ 0.09
SEC13-216ENST00000479868 LRP6O75581 1613 aa15.64■□□□□ 0.09
SEC13-216ENST00000479868 EYA2O00167 538 aa15.63■□□□□ 0.09
SEC13-216ENST00000479868 SLC27A2O14975 620 aa15.63■□□□□ 0.09
SEC13-216ENST00000479868 ZKSCAN1P17029 563 aaPredicted RBP15.63■□□□□ 0.09
SEC13-216ENST00000479868 COL9A3Q14050 684 aaPredicted RBP15.63■□□□□ 0.09
SEC13-216ENST00000479868 FAM89AQ96GI7 184 aa15.63■□□□□ 0.09
SEC13-216ENST00000479868 PUS3Q9BZE2 481 aaKnown RBP15.63■□□□□ 0.09
SEC13-216ENST00000479868 JCADQ9P266 1359 aa15.63■□□□□ 0.09
SEC13-216ENST00000479868 LARGE1O95461 756 aa15.63■□□□□ 0.09
SEC13-216ENST00000479868 TRIM28Q13263 835 aaKnown RBP15.63■□□□□ 0.09
SEC13-216ENST00000479868 VPS53Q5VIR6 699 aa15.63■□□□□ 0.09
SEC13-216ENST00000479868 DDX46Q7L014 1031 aaKnown RBP15.63■□□□□ 0.09
SEC13-216ENST00000479868 GAS2L3Q86XJ1 694 aa15.63■□□□□ 0.09
SEC13-216ENST00000479868 PDRG1Q9NUG6 133 aa15.63■□□□□ 0.09
SEC13-216ENST00000479868 CYP46A1Q9Y6A2 500 aa15.63■□□□□ 0.09
SEC13-216ENST00000479868 PRPF40AO75400 957 aaKnown RBP15.62■□□□□ 0.09
SEC13-216ENST00000479868 CYP19A1P11511 503 aaPredicted RBP15.62■□□□□ 0.09
SEC13-216ENST00000479868 HLFQ16534 295 aa15.62■□□□□ 0.09
SEC13-216ENST00000479868 KLHL34Q8N239 644 aa15.62■□□□□ 0.09
SEC13-216ENST00000479868 GPR108Q9NPR9 543 aa15.62■□□□□ 0.09
SEC13-216ENST00000479868 TAF6LQ9Y6J9 622 aa15.62■□□□□ 0.09
SEC13-216ENST00000479868 MAP3K15Q6ZN16 1313 aa15.62■□□□□ 0.09
SEC13-216ENST00000479868 ZNF609O15014 1411 aa15.62■□□□□ 0.09
SEC13-216ENST00000479868 TAF5LO75529 589 aa15.62■□□□□ 0.09
SEC13-216ENST00000479868 KCNA4P22459 653 aa15.62■□□□□ 0.09
SEC13-216ENST00000479868 PANK2Q9BZ23 570 aa15.62■□□□□ 0.09
SEC13-216ENST00000479868 RPAP1Q9BWH6 1393 aaPredicted RBP15.62■□□□□ 0.09
SEC13-216ENST00000479868 CIAO1O76071 339 aa15.61■□□□□ 0.09
SEC13-216ENST00000479868 PCCAP05165 728 aaPredicted RBP15.61■□□□□ 0.09
SEC13-216ENST00000479868 GIGYF2Q6Y7W6 1299 aaKnown RBP15.61■□□□□ 0.09
SEC13-216ENST00000479868 CCDC85AQ96PX6 553 aaPredicted RBP15.61■□□□□ 0.09
SEC13-216ENST00000479868 SEC62Q99442 399 aaKnown RBP15.61■□□□□ 0.09
SEC13-216ENST00000479868 DOT1LQ8TEK3 1739 aa15.61■□□□□ 0.09
SEC13-216ENST00000479868 ADAMTS2O95450 1211 aa15.61■□□□□ 0.09
SEC13-216ENST00000479868 RFX7Q2KHR2 1363 aa15.61■□□□□ 0.09
SEC13-216ENST00000479868 SYNE4Q8N205 404 aa15.61■□□□□ 0.09
SEC13-216ENST00000479868 ZBTB1Q9Y2K1 713 aa15.61■□□□□ 0.09
SEC13-216ENST00000479868 A0A1B0GUL7 405 aa15.6■□□□□ 0.09
SEC13-216ENST00000479868 PRIM1P49642 420 aaKnown RBP15.6■□□□□ 0.09
SEC13-216ENST00000479868 CCDC57Q2TAC2 916 aa15.6■□□□□ 0.09
SEC13-216ENST00000479868 CCDC129Q6ZRS4 1044 aa15.6■□□□□ 0.09
SEC13-216ENST00000479868 ZBTB38Q8NAP3 1195 aaPredicted RBP15.6■□□□□ 0.09
SEC13-216ENST00000479868 GRPEL1Q9HAV7 217 aa15.6■□□□□ 0.09
SEC13-216ENST00000479868 GPTP24298 496 aa15.6■□□□□ 0.09
SEC13-216ENST00000479868 MRE11P49959 708 aa15.6■□□□□ 0.09
SEC13-216ENST00000479868 KBTBD3Q8NAB2 608 aa15.6■□□□□ 0.09
SEC13-216ENST00000479868 GPT2Q8TD30 523 aa15.6■□□□□ 0.09
SEC13-216ENST00000479868 GOLIM4O00461 696 aa15.59■□□□□ 0.09
SEC13-216ENST00000479868 NCLP19338 710 aaKnown RBP15.59■□□□□ 0.09
SEC13-216ENST00000479868 RNF20Q5VTR2 975 aa15.59■□□□□ 0.09
SEC13-216ENST00000479868 PLA2G12BQ9BX93 195 aa15.59■□□□□ 0.09
SEC13-216ENST00000479868 ISY1Q9ULR0 285 aaKnown RBP15.59■□□□□ 0.09
SEC13-216ENST00000479868 LTBP4Q8N2S1 1624 aa15.58■□□□□ 0.09
SEC13-216ENST00000479868 USPL1Q5W0Q7 1092 aa15.58■□□□□ 0.09
SEC13-216ENST00000479868 CAVIN1Q6NZI2 390 aaKnown RBP15.58■□□□□ 0.09
SEC13-216ENST00000479868 PAG1Q9NWQ8 432 aa15.58■□□□□ 0.09
SEC13-216ENST00000479868 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.58■□□□□ 0.09
SEC13-216ENST00000479868 NUP98P52948 1817 aa15.58■□□□□ 0.08
SEC13-216ENST00000479868 DTNBO60941 627 aa15.58■□□□□ 0.08
SEC13-216ENST00000479868 CSF1RP07333 972 aa15.58■□□□□ 0.08
SEC13-216ENST00000479868 PSMA5P28066 241 aa15.58■□□□□ 0.08
SEC13-216ENST00000479868 ST3GAL1Q11201 340 aa15.58■□□□□ 0.08
SEC13-216ENST00000479868 SLFNL1Q499Z3 407 aa15.58■□□□□ 0.08
SEC13-216ENST00000479868 MCMDC2Q4G0Z9 681 aa15.58■□□□□ 0.08
SEC13-216ENST00000479868 NLRP10Q86W26 655 aa15.58■□□□□ 0.08
SEC13-216ENST00000479868 CCDC83Q8IWF9 413 aa15.58■□□□□ 0.08
SEC13-216ENST00000479868 ANKRD36CQ5JPF3 1778 aa15.58■□□□□ 0.08
SEC13-216ENST00000479868 NRAPQ86VF7 1730 aa15.58■□□□□ 0.08
SEC13-216ENST00000479868 TCHHQ07283 1943 aa15.58■□□□□ 0.08
SEC13-216ENST00000479868 PALLDQ8WX93 1383 aa15.58■□□□□ 0.08
SEC13-216ENST00000479868 SPATA31A1Q5TZJ5 1347 aa15.58■□□□□ 0.08
SEC13-216ENST00000479868 WDR33Q9C0J8 1336 aaKnown RBP15.58■□□□□ 0.08
SEC13-216ENST00000479868 PHLPP1O60346 1717 aa15.57■□□□□ 0.08
SEC13-216ENST00000479868 ME3Q16798 604 aa15.57■□□□□ 0.08
SEC13-216ENST00000479868 FOXD4L6Q3SYB3 417 aaPredicted RBP15.57■□□□□ 0.08
SEC13-216ENST00000479868 FOXD4L3Q6VB84 417 aaPredicted RBP15.57■□□□□ 0.08
SEC13-216ENST00000479868 TCEANC2Q96MN5 208 aa15.57■□□□□ 0.08
SEC13-216ENST00000479868 CEP126Q9P2H0 1117 aa15.57■□□□□ 0.08
SEC13-216ENST00000479868 TSGA10IPQ3SY00 556 aa15.57■□□□□ 0.08
SEC13-216ENST00000479868 ZSCAN31Q96LW9 406 aaPredicted RBP15.57■□□□□ 0.08
SEC13-216ENST00000479868 HMG20BQ9P0W2 317 aa15.57■□□□□ 0.08
SEC13-216ENST00000479868 TPCN1Q9ULQ1 816 aa15.57■□□□□ 0.08
SEC13-216ENST00000479868 SMC3Q9UQE7 1217 aa15.57■□□□□ 0.08
SEC13-216ENST00000479868 BLOC1S2Q6QNY1 142 aa15.56■□□□□ 0.08
SEC13-216ENST00000479868 SH2B1Q9NRF2 756 aaPredicted RBP15.56■□□□□ 0.08
SEC13-216ENST00000479868 NSFL1CQ9UNZ2 370 aaKnown RBP15.56■□□□□ 0.08
SEC13-216ENST00000479868 SH3TC1Q8TE82 1336 aa15.56■□□□□ 0.08
SEC13-216ENST00000479868 CDHR2Q9BYE9 1310 aa15.56■□□□□ 0.08
SEC13-216ENST00000479868 IFIT1P09914 478 aaKnown RBP15.56■□□□□ 0.08
SEC13-216ENST00000479868 SYT1P21579 422 aa15.56■□□□□ 0.08
SEC13-216ENST00000479868 IFIT5Q13325 482 aaKnown RBP15.56■□□□□ 0.08
SEC13-216ENST00000479868 TBC1D2BQ9UPU7 963 aa15.56■□□□□ 0.08
SEC13-216ENST00000479868 MYH3P11055 1940 aa15.55■□□□□ 0.08
SEC13-216ENST00000479868 RPS6KB1P23443 525 aa15.55■□□□□ 0.08
SEC13-216ENST00000479868 ADORA1P30542 326 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms