RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 PDE12Q6L8Q7 609 aaKnown RBP10.77□□□□□ -0.69
GAPVD1-217ENST00000479511 CHRDQ9H2X0 955 aa10.77□□□□□ -0.69
GAPVD1-217ENST00000479511 NEUROD4Q9HD90 331 aa10.77□□□□□ -0.69
GAPVD1-217ENST00000479511 ZDHHC3Q9NYG2 299 aa10.77□□□□□ -0.69
GAPVD1-217ENST00000479511 WDR4P57081 412 aaKnown RBP10.76□□□□□ -0.69
GAPVD1-217ENST00000479511 NBPF1Q3BBV0 1214 aa10.76□□□□□ -0.69
GAPVD1-217ENST00000479511 SLC27A3Q5K4L6 730 aa10.76□□□□□ -0.69
GAPVD1-217ENST00000479511 GADD45BO75293 160 aaPredicted RBP10.75□□□□□ -0.69
GAPVD1-217ENST00000479511 TIMP2P16035 220 aa10.75□□□□□ -0.69
GAPVD1-217ENST00000479511 TCEAL1Q15170 157 aa10.75□□□□□ -0.69
GAPVD1-217ENST00000479511 GALNT12Q8IXK2 581 aa10.75□□□□□ -0.69
GAPVD1-217ENST00000479511 RASGRP4Q8TDF6 673 aa10.75□□□□□ -0.69
GAPVD1-217ENST00000479511 SRCIN1Q9C0H9 1055 aa10.75□□□□□ -0.69
GAPVD1-217ENST00000479511 CNTN3Q9P232 1028 aa10.75□□□□□ -0.69
GAPVD1-217ENST00000479511 FNDC3AQ9Y2H6 1198 aaKnown RBP10.75□□□□□ -0.69
GAPVD1-217ENST00000479511 RB1CC1Q8TDY2 1594 aa10.74□□□□□ -0.69
GAPVD1-217ENST00000479511 EREGO14944 169 aa10.74□□□□□ -0.69
GAPVD1-217ENST00000479511 GPC1P35052 558 aa10.74□□□□□ -0.69
GAPVD1-217ENST00000479511 SLC19A1P41440 591 aa10.74□□□□□ -0.69
GAPVD1-217ENST00000479511 GRM2Q14416 872 aa10.74□□□□□ -0.69
GAPVD1-217ENST00000479511 BTLAQ7Z6A9 289 aa10.74□□□□□ -0.69
GAPVD1-217ENST00000479511 C1orf127Q8N9H9 656 aa10.74□□□□□ -0.69
GAPVD1-217ENST00000479511 ADAMTS1Q9UHI8 967 aa10.74□□□□□ -0.69
GAPVD1-217ENST00000479511 POTECB2RU33 542 aa10.73□□□□□ -0.69
GAPVD1-217ENST00000479511 ATP4AP20648 1035 aa10.73□□□□□ -0.69
GAPVD1-217ENST00000479511 RNF144AP50876 292 aaPredicted RBP10.73□□□□□ -0.69
GAPVD1-217ENST00000479511 SPACA7Q96KW9 195 aa10.73□□□□□ -0.69
GAPVD1-217ENST00000479511 INSM2Q96T92 566 aaPredicted RBP10.73□□□□□ -0.69
GAPVD1-217ENST00000479511 SUV39H2Q9H5I1 410 aa10.73□□□□□ -0.69
GAPVD1-217ENST00000479511 F6X3S4 739 aa10.72□□□□□ -0.69
GAPVD1-217ENST00000479511 MAP3K10Q02779 954 aa10.72□□□□□ -0.69
GAPVD1-217ENST00000479511 SPON2Q9BUD6 331 aa10.72□□□□□ -0.69
GAPVD1-217ENST00000479511 GPC6Q9Y625 555 aaPredicted RBP10.72□□□□□ -0.69
GAPVD1-217ENST00000479511 MRPL42Q9Y6G3 142 aaKnown RBP10.72□□□□□ -0.69
GAPVD1-217ENST00000479511 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.72□□□□□ -0.69
GAPVD1-217ENST00000479511 TATP17735 454 aaPredicted RBP10.71□□□□□ -0.69
GAPVD1-217ENST00000479511 SERINC3Q13530 473 aa10.71□□□□□ -0.69
GAPVD1-217ENST00000479511 BICDL1Q6ZP65 573 aa10.71□□□□□ -0.69
GAPVD1-217ENST00000479511 MEIOBQ8N635 442 aa10.71□□□□□ -0.69
GAPVD1-217ENST00000479511 C3orf58Q8NDZ4 430 aa10.71□□□□□ -0.69
GAPVD1-217ENST00000479511 GPATCH3Q96I76 525 aa10.71□□□□□ -0.69
GAPVD1-217ENST00000479511 ZIC5Q96T25 663 aa10.71□□□□□ -0.69
GAPVD1-217ENST00000479511 TRIM56Q9BRZ2 755 aaKnown RBP10.71□□□□□ -0.69
GAPVD1-217ENST00000479511 RSRP1Q9BUV0 290 aa10.71□□□□□ -0.69
GAPVD1-217ENST00000479511 PKD2L1Q9P0L9 805 aa10.71□□□□□ -0.69
GAPVD1-217ENST00000479511 ANKIB1Q9P2G1 1089 aa10.71□□□□□ -0.69
GAPVD1-217ENST00000479511 SPATA31C2B4DYI2 1134 aa10.7□□□□□ -0.7
GAPVD1-217ENST00000479511 J3QL48 77 aa10.7□□□□□ -0.7
GAPVD1-217ENST00000479511 FOXC1Q12948 553 aa10.7□□□□□ -0.7
GAPVD1-217ENST00000479511 SPRYD7Q5W111 196 aa10.7□□□□□ -0.7
GAPVD1-217ENST00000479511 NBPF10Q6P3W6 841 aaKnown RBP10.7□□□□□ -0.7
GAPVD1-217ENST00000479511 LRRC69Q6ZNQ3 347 aa10.7□□□□□ -0.7
GAPVD1-217ENST00000479511 GLIS3Q8NEA6 775 aa10.7□□□□□ -0.7
GAPVD1-217ENST00000479511 SEC16BQ96JE7 1060 aa10.7□□□□□ -0.7
GAPVD1-217ENST00000479511 NOC4LQ9BVI4 516 aaKnown RBP10.7□□□□□ -0.7
GAPVD1-217ENST00000479511 TTF2Q9UNY4 1162 aaKnown RBP10.7□□□□□ -0.7
GAPVD1-217ENST00000479511 NASPP49321 788 aaPredicted RBP10.69□□□□□ -0.7
GAPVD1-217ENST00000479511 KIAA0825Q8IV33 1275 aa10.69□□□□□ -0.7
GAPVD1-217ENST00000479511 CKAP2LQ8IYA6 745 aa10.69□□□□□ -0.7
GAPVD1-217ENST00000479511 SNIP1Q8TAD8 396 aaKnown RBP10.69□□□□□ -0.7
GAPVD1-217ENST00000479511 ZNF408Q9H9D4 720 aa10.69□□□□□ -0.7
GAPVD1-217ENST00000479511 LATS2Q9NRM7 1088 aa10.69□□□□□ -0.7
GAPVD1-217ENST00000479511 K7ELQ4 463 aaPredicted RBP10.68□□□□□ -0.7
GAPVD1-217ENST00000479511 XYLBO75191 536 aa10.68□□□□□ -0.7
GAPVD1-217ENST00000479511 GSTT1P30711 240 aa10.68□□□□□ -0.7
GAPVD1-217ENST00000479511 POU4F2Q12837 409 aa10.68□□□□□ -0.7
GAPVD1-217ENST00000479511 CHMP4AQ9BY43 222 aa10.68□□□□□ -0.7
GAPVD1-217ENST00000479511 MINDY4BA8MYZ0 360 aa10.67□□□□□ -0.7
GAPVD1-217ENST00000479511 SSBP05455 408 aaKnown RBP eCLIP10.67□□□□□ -0.7
GAPVD1-217ENST00000479511 ETFBP38117 255 aa10.67□□□□□ -0.7
GAPVD1-217ENST00000479511 CTSOP43234 321 aaPredicted RBP10.67□□□□□ -0.7
GAPVD1-217ENST00000479511 TYRO3Q06418 890 aa10.67□□□□□ -0.7
GAPVD1-217ENST00000479511 ZNF697Q5TEC3 545 aa10.67□□□□□ -0.7
GAPVD1-217ENST00000479511 MRFAP1L1Q96HT8 127 aa10.67□□□□□ -0.7
GAPVD1-217ENST00000479511 EAF1Q96JC9 268 aaPredicted RBP10.67□□□□□ -0.7
GAPVD1-217ENST00000479511 GINM1Q9NU53 330 aa10.67□□□□□ -0.7
GAPVD1-217ENST00000479511 ABI2Q9NYB9 513 aaPredicted RBP10.67□□□□□ -0.7
GAPVD1-217ENST00000479511 A0A1W2PP55 124 aa10.66□□□□□ -0.7
GAPVD1-217ENST00000479511 SPINT1O43278 529 aa10.66□□□□□ -0.7
GAPVD1-217ENST00000479511 VEGFBP49765 207 aa10.66□□□□□ -0.7
GAPVD1-217ENST00000479511 NFE2L2Q16236 605 aa10.66□□□□□ -0.7
GAPVD1-217ENST00000479511 CTC1Q2NKJ3 1217 aa10.66□□□□□ -0.7
GAPVD1-217ENST00000479511 KIAA0319Q5VV43 1072 aa10.66□□□□□ -0.7
GAPVD1-217ENST00000479511 EFR3BQ9Y2G0 817 aa10.66□□□□□ -0.7
GAPVD1-217ENST00000479511 CYP2E1P05181 493 aaPredicted RBP10.65□□□□□ -0.7
GAPVD1-217ENST00000479511 GBP2P32456 591 aaPredicted RBP10.65□□□□□ -0.7
GAPVD1-217ENST00000479511 NFX1Q12986 1120 aaKnown RBP10.65□□□□□ -0.7
GAPVD1-217ENST00000479511 NBPF6Q5VWK0 638 aa10.65□□□□□ -0.7
GAPVD1-217ENST00000479511 RELL1Q8IUW5 271 aa10.65□□□□□ -0.7
GAPVD1-217ENST00000479511 NBPF4Q96M43 638 aa10.65□□□□□ -0.7
GAPVD1-217ENST00000479511 TMEM74Q96NL1 305 aa10.65□□□□□ -0.7
GAPVD1-217ENST00000479511 IRX2Q9BZI1 471 aaPredicted RBP10.65□□□□□ -0.7
GAPVD1-217ENST00000479511 POLMQ9NP87 494 aaPredicted RBP10.65□□□□□ -0.7
GAPVD1-217ENST00000479511 MRVI1Q9Y6F6 885 aa10.65□□□□□ -0.7
GAPVD1-217ENST00000479511 XRCC5P13010 732 aaKnown RBP10.64□□□□□ -0.71
GAPVD1-217ENST00000479511 CES1P23141 567 aa10.64□□□□□ -0.71
GAPVD1-217ENST00000479511 EIF4A3P38919 411 aaKnown RBP10.64□□□□□ -0.71
GAPVD1-217ENST00000479511 CCDC85BQ15834 202 aaPredicted RBP10.64□□□□□ -0.71
GAPVD1-217ENST00000479511 ARSJQ5FYB0 599 aaPredicted RBP10.64□□□□□ -0.71
GAPVD1-217ENST00000479511 PEAR1Q5VY43 1037 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms