RNA–Protein interactions for RNA: ENST00000479428.3

RN7SL546P-201, Transcript of RNA, 7SL, cytoplasmic 546, pseudogene, humanhuman

BASIC

Gene RN7SL546P, Length 290 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL546P-201ENST00000479428 DLEC1Q9Y238 1755 aa13.59□□□□□ -0.23
RN7SL546P-201ENST00000479428 HOXA10P31260 410 aaPredicted RBP13.59□□□□□ -0.23
RN7SL546P-201ENST00000479428 CTSWP56202 376 aa13.59□□□□□ -0.23
RN7SL546P-201ENST00000479428 C20orf194Q5TEA3 1177 aa13.59□□□□□ -0.23
RN7SL546P-201ENST00000479428 RPGRQ92834 1020 aaKnown RBP13.59□□□□□ -0.23
RN7SL546P-201ENST00000479428 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.23
RN7SL546P-201ENST00000479428 SUCLG2Q96I99 432 aa13.59□□□□□ -0.23
RN7SL546P-201ENST00000479428 MEIS3Q99687 375 aa13.59□□□□□ -0.23
RN7SL546P-201ENST00000479428 PIM2Q9P1W9 311 aa13.59□□□□□ -0.23
RN7SL546P-201ENST00000479428 UBTFL1P0CB47 393 aaPredicted RBP13.58□□□□□ -0.24
RN7SL546P-201ENST00000479428 FOXO4P98177 505 aa13.58□□□□□ -0.24
RN7SL546P-201ENST00000479428 EPHA10Q5JZY3 1008 aa13.58□□□□□ -0.24
RN7SL546P-201ENST00000479428 TTLL11Q8NHH1 800 aa13.58□□□□□ -0.24
RN7SL546P-201ENST00000479428 CNKSR1Q969H4 720 aa13.58□□□□□ -0.24
RN7SL546P-201ENST00000479428 RBM17Q96I25 401 aaKnown RBP13.58□□□□□ -0.24
RN7SL546P-201ENST00000479428 KAZALD1Q96I82 304 aa13.58□□□□□ -0.24
RN7SL546P-201ENST00000479428 WWC3Q9ULE0 1092 aa13.58□□□□□ -0.24
RN7SL546P-201ENST00000479428 CSF1RP07333 972 aa13.57□□□□□ -0.24
RN7SL546P-201ENST00000479428 GNAI3P08754 354 aa13.57□□□□□ -0.24
RN7SL546P-201ENST00000479428 ALDH1B1P30837 517 aa13.57□□□□□ -0.24
RN7SL546P-201ENST00000479428 MVPQ14764 893 aaKnown RBP13.57□□□□□ -0.24
RN7SL546P-201ENST00000479428 CCDC152Q4G0S7 254 aa13.57□□□□□ -0.24
RN7SL546P-201ENST00000479428 DDX46Q7L014 1031 aaKnown RBP13.57□□□□□ -0.24
RN7SL546P-201ENST00000479428 TTLL6Q8N841 843 aa13.57□□□□□ -0.24
RN7SL546P-201ENST00000479428 CCDC85AQ96PX6 553 aaPredicted RBP13.57□□□□□ -0.24
RN7SL546P-201ENST00000479428 CRAMP1Q96RY5 1269 aa13.57□□□□□ -0.24
RN7SL546P-201ENST00000479428 COG6Q9Y2V7 657 aa13.57□□□□□ -0.24
RN7SL546P-201ENST00000479428 SUPT16HQ9Y5B9 1047 aaKnown RBP13.57□□□□□ -0.24
RN7SL546P-201ENST00000479428 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
RN7SL546P-201ENST00000479428 MYH3P11055 1940 aa13.56□□□□□ -0.24
RN7SL546P-201ENST00000479428 ZBTB7BO15156 539 aaPredicted RBP13.56□□□□□ -0.24
RN7SL546P-201ENST00000479428 DALRD3Q5D0E6 543 aaKnown RBP13.56□□□□□ -0.24
RN7SL546P-201ENST00000479428 BICC1Q9H694 974 aaKnown RBP13.56□□□□□ -0.24
RN7SL546P-201ENST00000479428 GREM2Q9H772 168 aa13.56□□□□□ -0.24
RN7SL546P-201ENST00000479428 HDAC5Q9UQL6 1122 aa13.56□□□□□ -0.24
RN7SL546P-201ENST00000479428 FAM161AQ3B820 660 aa13.55□□□□□ -0.24
RN7SL546P-201ENST00000479428 RABL6Q3YEC7 729 aaPredicted RBP13.55□□□□□ -0.24
RN7SL546P-201ENST00000479428 PRPF40BQ6NWY9 871 aaKnown RBP13.55□□□□□ -0.24
RN7SL546P-201ENST00000479428 LMBR1LQ6UX01 489 aa13.55□□□□□ -0.24
RN7SL546P-201ENST00000479428 ANKRD44Q8N8A2 993 aa13.55□□□□□ -0.24
RN7SL546P-201ENST00000479428 GPBP1L1Q9HC44 474 aaPredicted RBP13.55□□□□□ -0.24
RN7SL546P-201ENST00000479428 SEC31BQ9NQW1 1179 aa13.55□□□□□ -0.24
RN7SL546P-201ENST00000479428 DDX19BQ9UMR2 479 aa13.55□□□□□ -0.24
RN7SL546P-201ENST00000479428 BCS1LQ9Y276 419 aa13.55□□□□□ -0.24
RN7SL546P-201ENST00000479428 LRRFIP2Q9Y608 721 aaKnown RBP13.55□□□□□ -0.24
RN7SL546P-201ENST00000479428 RTL9Q8NET4 1388 aa13.55□□□□□ -0.24
RN7SL546P-201ENST00000479428 GNAI2P04899 355 aa13.54□□□□□ -0.24
RN7SL546P-201ENST00000479428 GRAPQ13588 217 aa13.54□□□□□ -0.24
RN7SL546P-201ENST00000479428 GRAPLQ8TC17 118 aaPredicted RBP13.54□□□□□ -0.24
RN7SL546P-201ENST00000479428 CELF1Q92879 486 aaKnown RBP13.54□□□□□ -0.24
RN7SL546P-201ENST00000479428 CHMP3Q9Y3E7 222 aa13.54□□□□□ -0.24
RN7SL546P-201ENST00000479428 SLX4Q8IY92 1834 aa13.53□□□□□ -0.24
RN7SL546P-201ENST00000479428 BBOX1O75936 387 aa13.53□□□□□ -0.24
RN7SL546P-201ENST00000479428 ITGA6P23229 1130 aa13.53□□□□□ -0.24
RN7SL546P-201ENST00000479428 TAF1P21675 1872 aa13.53□□□□□ -0.24
RN7SL546P-201ENST00000479428 ANKRD18BA2A2Z9 1011 aa13.52□□□□□ -0.25
RN7SL546P-201ENST00000479428 PPEF1O14829 653 aaPredicted RBP13.52□□□□□ -0.25
RN7SL546P-201ENST00000479428 CENPBP07199 599 aaPredicted RBP13.52□□□□□ -0.25
RN7SL546P-201ENST00000479428 RPS8P62241 208 aaKnown RBP13.52□□□□□ -0.25
RN7SL546P-201ENST00000479428 IFIT5Q13325 482 aaKnown RBP13.52□□□□□ -0.25
RN7SL546P-201ENST00000479428 CCDC57Q2TAC2 916 aa13.52□□□□□ -0.25
RN7SL546P-201ENST00000479428 C7orf43Q8WVR3 580 aa13.52□□□□□ -0.25
RN7SL546P-201ENST00000479428 CDC5LQ99459 802 aaKnown RBP13.52□□□□□ -0.25
RN7SL546P-201ENST00000479428 CHMP4BQ9H444 224 aaKnown RBP13.52□□□□□ -0.25
RN7SL546P-201ENST00000479428 COL4A1P02462 1669 aa13.52□□□□□ -0.25
RN7SL546P-201ENST00000479428 CACNA1SQ13698 1873 aa13.52□□□□□ -0.25
RN7SL546P-201ENST00000479428 ARFGEF1Q9Y6D6 1849 aa13.51□□□□□ -0.25
RN7SL546P-201ENST00000479428 C21orf2O43822 256 aa13.51□□□□□ -0.25
RN7SL546P-201ENST00000479428 HSPA6P17066 643 aa13.51□□□□□ -0.25
RN7SL546P-201ENST00000479428 ANKRD18AQ8IVF6 992 aa13.51□□□□□ -0.25
RN7SL546P-201ENST00000479428 C1orf115Q9H7X2 142 aa13.51□□□□□ -0.25
RN7SL546P-201ENST00000479428 ZBTB40Q9NUA8 1239 aa13.51□□□□□ -0.25
RN7SL546P-201ENST00000479428 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
RN7SL546P-201ENST00000479428 IFFO2Q5TF58 517 aa13.5□□□□□ -0.25
RN7SL546P-201ENST00000479428 OLFM4Q6UX06 510 aa13.5□□□□□ -0.25
RN7SL546P-201ENST00000479428 TMC4Q7Z404 712 aa13.5□□□□□ -0.25
RN7SL546P-201ENST00000479428 SLC51AQ86UW1 340 aa13.5□□□□□ -0.25
RN7SL546P-201ENST00000479428 CRBNQ96SW2 442 aa13.5□□□□□ -0.25
RN7SL546P-201ENST00000479428 ATP6V0A2Q9Y487 856 aa13.5□□□□□ -0.25
RN7SL546P-201ENST00000479428 KIF3CO14782 793 aa13.49□□□□□ -0.25
RN7SL546P-201ENST00000479428 IGHMBP2P38935 993 aaKnown RBP13.49□□□□□ -0.25
RN7SL546P-201ENST00000479428 MTX1Q13505 466 aa13.49□□□□□ -0.25
RN7SL546P-201ENST00000479428 TAF7LQ5H9L4 462 aa13.49□□□□□ -0.25
RN7SL546P-201ENST00000479428 SOGA3Q5TF21 947 aa13.49□□□□□ -0.25
RN7SL546P-201ENST00000479428 SP8Q8IXZ3 490 aa13.49□□□□□ -0.25
RN7SL546P-201ENST00000479428 ZNF594Q96JF6 807 aaPredicted RBP13.49□□□□□ -0.25
RN7SL546P-201ENST00000479428 SRGAP3O43295 1099 aa13.48□□□□□ -0.25
RN7SL546P-201ENST00000479428 RFX5P48382 616 aaPredicted RBP13.48□□□□□ -0.25
RN7SL546P-201ENST00000479428 CCDC93Q567U6 631 aa13.48□□□□□ -0.25
RN7SL546P-201ENST00000479428 CC2D2BQ6DHV5 1058 aa13.48□□□□□ -0.25
RN7SL546P-201ENST00000479428 MPHOSPH8Q99549 860 aa13.48□□□□□ -0.25
RN7SL546P-201ENST00000479428 TMX4Q9H1E5 349 aaPredicted RBP13.48□□□□□ -0.25
RN7SL546P-201ENST00000479428 BSDC1Q9NW68 430 aaPredicted RBP13.48□□□□□ -0.25
RN7SL546P-201ENST00000479428 PNMA6EA0A0J9YXQ4 647 aa13.47□□□□□ -0.25
RN7SL546P-201ENST00000479428 ATP8B2P98198 1209 aa13.47□□□□□ -0.25
RN7SL546P-201ENST00000479428 CEP85Q6P2H3 762 aa13.47□□□□□ -0.25
RN7SL546P-201ENST00000479428 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
RN7SL546P-201ENST00000479428 PTPN12Q05209 780 aaKnown RBP13.46□□□□□ -0.25
RN7SL546P-201ENST00000479428 GRIPAP1Q4V328 841 aa13.46□□□□□ -0.25
RN7SL546P-201ENST00000479428 LDHAL6AQ6ZMR3 332 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms