RNA–Protein interactions for RNA: ENST00000479275.1

RBM5-220, Transcript of RNA binding motif protein 5, human

TSL 2

Gene RBM5, Length 1,683 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM5-220	ENST00000479275	GOLGA2	Q08379	1002 aa		12	□□□□□ -0.49
RBM5-220	ENST00000479275	C7orf43	Q8WVR3	580 aa		12	□□□□□ -0.49
RBM5-220	ENST00000479275	TSR2	Q969E8	191 aa	Known RBP	12	□□□□□ -0.49
RBM5-220	ENST00000479275	PDE4A	P27815	886 aa		12	□□□□□ -0.49
RBM5-220	ENST00000479275	TRIM28	Q13263	835 aa	Known RBP	12	□□□□□ -0.49
RBM5-220	ENST00000479275	GRIPAP1	Q4V328	841 aa		12	□□□□□ -0.49
RBM5-220	ENST00000479275	RPGR	Q92834	1020 aa	Known RBP	12	□□□□□ -0.49
RBM5-220	ENST00000479275	NLRP3	Q96P20	1036 aa		12	□□□□□ -0.49
RBM5-220	ENST00000479275	STK31	Q9BXU1	1019 aa		12	□□□□□ -0.49
RBM5-220	ENST00000479275	BACH2	Q9BYV9	841 aa		12	□□□□□ -0.49
RBM5-220	ENST00000479275	SH3TC1	Q8TE82	1336 aa		11.99	□□□□□ -0.49
RBM5-220	ENST00000479275	DDX58	O95786	925 aa	Known RBP	11.99	□□□□□ -0.49
RBM5-220	ENST00000479275	TWISTNB	Q3B726	338 aa	Predicted RBP	11.99	□□□□□ -0.49
RBM5-220	ENST00000479275	CCDC93	Q567U6	631 aa		11.99	□□□□□ -0.49
RBM5-220	ENST00000479275	CC2D2B	Q6DHV5	1058 aa		11.99	□□□□□ -0.49
RBM5-220	ENST00000479275	TRMT2A	Q8IZ69	625 aa	Known RBP	11.99	□□□□□ -0.49
RBM5-220	ENST00000479275	TSPYL6	Q8N831	410 aa		11.99	□□□□□ -0.49
RBM5-220	ENST00000479275	CRAMP1	Q96RY5	1269 aa		11.99	□□□□□ -0.49
RBM5-220	ENST00000479275	CRBN	Q96SW2	442 aa		11.99	□□□□□ -0.49
RBM5-220	ENST00000479275	ISCA1	Q9BUE6	129 aa		11.99	□□□□□ -0.49
RBM5-220	ENST00000479275	TAOK3	Q9H2K8	898 aa		11.99	□□□□□ -0.49
RBM5-220	ENST00000479275	TRMT112	Q9UI30	125 aa	Known RBP	11.99	□□□□□ -0.49
RBM5-220	ENST00000479275	RIC3	Q7Z5B4	369 aa		11.98	□□□□□ -0.49
RBM5-220	ENST00000479275	HOMEZ	Q8IX15	550 aa		11.98	□□□□□ -0.49
RBM5-220	ENST00000479275	RTKN2	Q8IZC4	609 aa		11.98	□□□□□ -0.49
RBM5-220	ENST00000479275	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.98	□□□□□ -0.49
RBM5-220	ENST00000479275	RBM17	Q96I25	401 aa	Known RBP	11.98	□□□□□ -0.49
RBM5-220	ENST00000479275	MYH16	Q9H6N6	1097 aa		11.98	□□□□□ -0.49
RBM5-220	ENST00000479275	PHAX	Q9H814	394 aa	Known RBP	11.98	□□□□□ -0.49
RBM5-220	ENST00000479275	TIAM2	Q8IVF5	1701 aa		11.98	□□□□□ -0.49
RBM5-220	ENST00000479275	POTEI	P0CG38	1075 aa		11.97	□□□□□ -0.49
RBM5-220	ENST00000479275	POTEJ	P0CG39	1038 aa		11.97	□□□□□ -0.49
RBM5-220	ENST00000479275	SLFN5	Q08AF3	891 aa		11.97	□□□□□ -0.49
RBM5-220	ENST00000479275	BCL11A	Q9H165	835 aa		11.97	□□□□□ -0.49
RBM5-220	ENST00000479275	LAMB2	P55268	1798 aa		11.97	□□□□□ -0.49
RBM5-220	ENST00000479275	HSP90B1	P14625	803 aa	Known RBP	11.97	□□□□□ -0.49
RBM5-220	ENST00000479275	DDN	O94850	711 aa	Predicted RBP	11.96	□□□□□ -0.5
RBM5-220	ENST00000479275	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.96	□□□□□ -0.5
RBM5-220	ENST00000479275	PLIN1	O60240	522 aa		11.95	□□□□□ -0.5
RBM5-220	ENST00000479275	DPY19L2	Q6NUT2	758 aa		11.95	□□□□□ -0.5
RBM5-220	ENST00000479275	KSR2	Q6VAB6	950 aa		11.95	□□□□□ -0.5
RBM5-220	ENST00000479275	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.95	□□□□□ -0.5
RBM5-220	ENST00000479275	CCDC191	Q8NCU4	936 aa		11.95	□□□□□ -0.5
RBM5-220	ENST00000479275	PSMD1	Q99460	953 aa		11.95	□□□□□ -0.5
RBM5-220	ENST00000479275	TMX4	Q9H1E5	349 aa	Predicted RBP	11.95	□□□□□ -0.5
RBM5-220	ENST00000479275	DDX60	Q8IY21	1712 aa	Known RBP	11.95	□□□□□ -0.5
RBM5-220	ENST00000479275	ATP5J2-PTCD1	G3V325	749 aa		11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	HSPA1A	P0DMV8	641 aa	Known RBP	11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	HSPA1B	P0DMV9	641 aa	Known RBP	11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	OLFM4	Q6UX06	510 aa		11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	METTL22	Q9BUU2	404 aa	Predicted RBP	11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	SNED1	Q8TER0	1413 aa		11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	PPEF1	O14829	653 aa	Predicted RBP	11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	VAMP4	O75379	141 aa		11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	BBOX1	O75936	387 aa		11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	HCLS1	P14317	486 aa	Predicted RBP	11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	EXOSC9	Q06265	439 aa	Known RBP	11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	C3orf67	Q6ZVT6	689 aa		11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	TMC4	Q7Z404	712 aa		11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	TNS4	Q8IZW8	715 aa		11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.94	□□□□□ -0.5
RBM5-220	ENST00000479275	PI4KAP2	A4QPH2	592 aa		11.93	□□□□□ -0.5
RBM5-220	ENST00000479275	NEXN	Q0ZGT2	675 aa		11.93	□□□□□ -0.5
RBM5-220	ENST00000479275	SF3B3	Q15393	1217 aa	Known RBP	11.93	□□□□□ -0.5
RBM5-220	ENST00000479275	DDX46	Q7L014	1031 aa	Known RBP	11.93	□□□□□ -0.5
RBM5-220	ENST00000479275	SYNE4	Q8N205	404 aa		11.93	□□□□□ -0.5
RBM5-220	ENST00000479275	PI4KAP1	Q8N8J0	262 aa		11.93	□□□□□ -0.5
RBM5-220	ENST00000479275	FAM89A	Q96GI7	184 aa		11.93	□□□□□ -0.5
RBM5-220	ENST00000479275	MYD88	Q99836	296 aa		11.93	□□□□□ -0.5
RBM5-220	ENST00000479275	CWC25	Q9NXE8	425 aa	Predicted RBP	11.93	□□□□□ -0.5
RBM5-220	ENST00000479275	MAP3K2	Q9Y2U5	619 aa		11.93	□□□□□ -0.5
RBM5-220	ENST00000479275	ATP6V0A2	Q9Y487	856 aa		11.93	□□□□□ -0.5
RBM5-220	ENST00000479275	ABCC4	O15439	1325 aa		11.92	□□□□□ -0.5
RBM5-220	ENST00000479275		E9PSI1	815 aa		11.92	□□□□□ -0.5
RBM5-220	ENST00000479275	TULP1	O00294	542 aa	Predicted RBP	11.92	□□□□□ -0.5
RBM5-220	ENST00000479275	PCCA	P05165	728 aa	Predicted RBP	11.92	□□□□□ -0.5
RBM5-220	ENST00000479275	DEK	P35659	375 aa	Known RBP	11.92	□□□□□ -0.5
RBM5-220	ENST00000479275	CHADL	Q6NUI6	762 aa		11.92	□□□□□ -0.5
RBM5-220	ENST00000479275	VPS33B	Q9H267	617 aa		11.92	□□□□□ -0.5
RBM5-220	ENST00000479275	IRS4	O14654	1257 aa	Predicted RBP	11.91	□□□□□ -0.5
RBM5-220	ENST00000479275	FLII	Q13045	1269 aa		11.91	□□□□□ -0.5
RBM5-220	ENST00000479275	GRAP	Q13588	217 aa		11.91	□□□□□ -0.5
RBM5-220	ENST00000479275	GRAPL	Q8TC17	118 aa	Predicted RBP	11.91	□□□□□ -0.5
RBM5-220	ENST00000479275	DDRGK1	Q96HY6	314 aa		11.91	□□□□□ -0.5
RBM5-220	ENST00000479275	MKRN1	Q9UHC7	482 aa	Known RBP	11.91	□□□□□ -0.5
RBM5-220	ENST00000479275	IARS	P41252	1262 aa	Known RBP	11.91	□□□□□ -0.5
RBM5-220	ENST00000479275	C20orf194	Q5TEA3	1177 aa		11.91	□□□□□ -0.5
RBM5-220	ENST00000479275	SP8	Q8IXZ3	490 aa		11.91	□□□□□ -0.5
RBM5-220	ENST00000479275	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.91	□□□□□ -0.5
RBM5-220	ENST00000479275	CDHR2	Q9BYE9	1310 aa		11.9	□□□□□ -0.5
RBM5-220	ENST00000479275	LRRC37A	A6NMS7	1700 aa		11.9	□□□□□ -0.5
RBM5-220	ENST00000479275	FKBP5	Q13451	457 aa	Predicted RBP	11.9	□□□□□ -0.5
RBM5-220	ENST00000479275	G2E3	Q7L622	706 aa		11.9	□□□□□ -0.5
RBM5-220	ENST00000479275	SUPT20H	Q8NEM7	779 aa		11.9	□□□□□ -0.5
RBM5-220	ENST00000479275	JDP2	Q8WYK2	163 aa		11.9	□□□□□ -0.5
RBM5-220	ENST00000479275	ZNF541	Q9H0D2	1346 aa		11.9	□□□□□ -0.51
RBM5-220	ENST00000479275	PDE8A	O60658	829 aa		11.89	□□□□□ -0.51
RBM5-220	ENST00000479275	IGKV5-2	P06315	115 aa		11.89	□□□□□ -0.51
RBM5-220	ENST00000479275	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.89	□□□□□ -0.51
RBM5-220	ENST00000479275	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.89	□□□□□ -0.51

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