RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 FZD9O00144 591 aa24.11■■□□□ 1.45
SREBF1-212ENST00000478616 DDX58O95786 925 aaKnown RBP24.11■■□□□ 1.45
SREBF1-212ENST00000478616 CWC25Q9NXE8 425 aaPredicted RBP24.11■■□□□ 1.45
SREBF1-212ENST00000478616 SCN4AP35499 1836 aa24.11■■□□□ 1.45
SREBF1-212ENST00000478616 NEURL1BA8MQ27 555 aa24.1■■□□□ 1.45
SREBF1-212ENST00000478616 BBOX1O75936 387 aa24.1■■□□□ 1.45
SREBF1-212ENST00000478616 SP8Q8IXZ3 490 aa24.1■■□□□ 1.45
SREBF1-212ENST00000478616 RTFDC1Q9BY42 306 aaPredicted RBP24.1■■□□□ 1.45
SREBF1-212ENST00000478616 CHMP4AQ9BY43 222 aa24.1■■□□□ 1.45
SREBF1-212ENST00000478616 SPEF2Q9C093 1822 aa24.1■■□□□ 1.45
SREBF1-212ENST00000478616 DDX46Q7L014 1031 aaKnown RBP24.09■■□□□ 1.45
SREBF1-212ENST00000478616 RBM46Q8TBY0 533 aaKnown RBP24.09■■□□□ 1.45
SREBF1-212ENST00000478616 CDCA7LQ96GN5 454 aa24.09■■□□□ 1.45
SREBF1-212ENST00000478616 MYH16Q9H6N6 1097 aa24.09■■□□□ 1.45
SREBF1-212ENST00000478616 SEC31BQ9NQW1 1179 aa24.09■■□□□ 1.45
SREBF1-212ENST00000478616 ADAMTSL1Q8N6G6 1762 aa24.08■■□□□ 1.45
SREBF1-212ENST00000478616 CASP7P55210 303 aa24.08■■□□□ 1.45
SREBF1-212ENST00000478616 SLFN5Q08AF3 891 aa24.08■■□□□ 1.45
SREBF1-212ENST00000478616 CDHR2Q9BYE9 1310 aa24.08■■□□□ 1.44
SREBF1-212ENST00000478616 HSPA6P17066 643 aa24.07■■□□□ 1.44
SREBF1-212ENST00000478616 TRMT2AQ8IZ69 625 aaKnown RBP24.07■■□□□ 1.44
SREBF1-212ENST00000478616 F6X3S4 739 aa24.06■■□□□ 1.44
SREBF1-212ENST00000478616 H7C1W4 665 aa24.06■■□□□ 1.44
SREBF1-212ENST00000478616 VEGFAP15692 232 aaPredicted RBP24.06■■□□□ 1.44
SREBF1-212ENST00000478616 L3MBTL3Q96JM7 780 aaPredicted RBP24.06■■□□□ 1.44
SREBF1-212ENST00000478616 POTEIP0CG38 1075 aa24.05■■□□□ 1.44
SREBF1-212ENST00000478616 POTEJP0CG39 1038 aa24.05■■□□□ 1.44
SREBF1-212ENST00000478616 DNAAF4Q8WXU2 420 aa24.05■■□□□ 1.44
SREBF1-212ENST00000478616 PDE8AO60658 829 aa24.04■■□□□ 1.44
SREBF1-212ENST00000478616 FKBP5Q13451 457 aaPredicted RBP24.04■■□□□ 1.44
SREBF1-212ENST00000478616 GRIPAP1Q4V328 841 aa24.04■■□□□ 1.44
SREBF1-212ENST00000478616 DPY19L2Q6NUT2 758 aa24.04■■□□□ 1.44
SREBF1-212ENST00000478616 MIER1Q8N108 512 aa24.04■■□□□ 1.44
SREBF1-212ENST00000478616 GCKRQ14397 625 aa24.03■■□□□ 1.44
SREBF1-212ENST00000478616 AOC3Q16853 763 aa24.03■■□□□ 1.44
SREBF1-212ENST00000478616 CCDC85AQ96PX6 553 aaPredicted RBP24.03■■□□□ 1.44
SREBF1-212ENST00000478616 SCN9AQ15858 1988 aa24.02■■□□□ 1.44
SREBF1-212ENST00000478616 BEND3Q5T5X7 828 aa24.02■■□□□ 1.44
SREBF1-212ENST00000478616 MPNDQ8N594 471 aa24.02■■□□□ 1.44
SREBF1-212ENST00000478616 E9PSI1 815 aa24.01■■□□□ 1.43
SREBF1-212ENST00000478616 RPS8P62241 208 aaKnown RBP24.01■■□□□ 1.43
SREBF1-212ENST00000478616 GPSM2P81274 684 aa24.01■■□□□ 1.43
SREBF1-212ENST00000478616 LARGE2Q8N3Y3 721 aa24.01■■□□□ 1.43
SREBF1-212ENST00000478616 TTLL11Q8NHH1 800 aa24.01■■□□□ 1.43
SREBF1-212ENST00000478616 DPP8Q6V1X1 898 aaPredicted RBP24■■□□□ 1.43
SREBF1-212ENST00000478616 UBE3BQ7Z3V4 1068 aa24■■□□□ 1.43
SREBF1-212ENST00000478616 MRPL50Q8N5N7 158 aaKnown RBP24■■□□□ 1.43
SREBF1-212ENST00000478616 LINS1Q8NG48 757 aa24■■□□□ 1.43
SREBF1-212ENST00000478616 POLLQ9UGP5 575 aa24■■□□□ 1.43
SREBF1-212ENST00000478616 A0A1B0GUL6 1792 aa24■■□□□ 1.43
SREBF1-212ENST00000478616 PPIP5K2O43314 1243 aa23.99■■□□□ 1.43
SREBF1-212ENST00000478616 CTSWP56202 376 aa23.99■■□□□ 1.43
SREBF1-212ENST00000478616 KIAA2012Q0VF49 1180 aa23.99■■□□□ 1.43
SREBF1-212ENST00000478616 NEXNQ0ZGT2 675 aa23.99■■□□□ 1.43
SREBF1-212ENST00000478616 FSTL1Q12841 308 aa23.99■■□□□ 1.43
SREBF1-212ENST00000478616 TMC4Q7Z404 712 aa23.99■■□□□ 1.43
SREBF1-212ENST00000478616 PLA2G12BQ9BX93 195 aa23.99■■□□□ 1.43
SREBF1-212ENST00000478616 YDJCA8MPS7 323 aa23.98■■□□□ 1.43
SREBF1-212ENST00000478616 GPR101Q96P66 508 aaPredicted RBP23.98■■□□□ 1.43
SREBF1-212ENST00000478616 TAF1DQ9H5J8 278 aaPredicted RBP23.98■■□□□ 1.43
SREBF1-212ENST00000478616 GREM2Q9H772 168 aa23.98■■□□□ 1.43
SREBF1-212ENST00000478616 RTL9Q8NET4 1388 aa23.98■■□□□ 1.43
SREBF1-212ENST00000478616 ZNF646O15015 1829 aaPredicted RBP23.98■■□□□ 1.43
SREBF1-212ENST00000478616 WTIPA6NIX2 430 aaPredicted RBP23.97■■□□□ 1.43
SREBF1-212ENST00000478616 CCDC152Q4G0S7 254 aa23.97■■□□□ 1.43
SREBF1-212ENST00000478616 DIEXFQ68CQ4 756 aaKnown RBP23.97■■□□□ 1.43
SREBF1-212ENST00000478616 C16orf71Q8IYS4 520 aaPredicted RBP23.97■■□□□ 1.43
SREBF1-212ENST00000478616 GPC2Q8N158 579 aa23.97■■□□□ 1.43
SREBF1-212ENST00000478616 JDP2Q8WYK2 163 aa23.97■■□□□ 1.43
SREBF1-212ENST00000478616 SSH1Q8WYL5 1049 aa23.97■■□□□ 1.43
SREBF1-212ENST00000478616 VPS33BQ9H267 617 aa23.97■■□□□ 1.43
SREBF1-212ENST00000478616 SCNN1DP51172 638 aa23.96■■□□□ 1.43
SREBF1-212ENST00000478616 HTRA3P83110 453 aa23.96■■□□□ 1.43
SREBF1-212ENST00000478616 CXCL9Q07325 125 aa23.96■■□□□ 1.43
SREBF1-212ENST00000478616 PSME4Q14997 1843 aa23.96■■□□□ 1.43
SREBF1-212ENST00000478616 CSF1RP07333 972 aa23.95■■□□□ 1.42
SREBF1-212ENST00000478616 SMC1BQ8NDV3 1235 aa23.95■■□□□ 1.42
SREBF1-212ENST00000478616 NSFL1CQ9UNZ2 370 aaKnown RBP23.95■■□□□ 1.42
SREBF1-212ENST00000478616 EPHA10Q5JZY3 1008 aa23.94■■□□□ 1.42
SREBF1-212ENST00000478616 NIM1KQ8IY84 436 aa23.94■■□□□ 1.42
SREBF1-212ENST00000478616 DNAJC5GQ8N7S2 189 aa23.94■■□□□ 1.42
SREBF1-212ENST00000478616 SUPT20HQ8NEM7 779 aa23.94■■□□□ 1.42
SREBF1-212ENST00000478616 TBC1D16Q8TBP0 767 aa23.94■■□□□ 1.42
SREBF1-212ENST00000478616 PODXL2Q9NZ53 605 aa23.94■■□□□ 1.42
SREBF1-212ENST00000478616 FOXO4P98177 505 aa23.93■■□□□ 1.42
SREBF1-212ENST00000478616 ZNRF3Q9ULT6 936 aa23.93■■□□□ 1.42
SREBF1-212ENST00000478616 HSP90B1P14625 803 aaKnown RBP23.92■■□□□ 1.42
SREBF1-212ENST00000478616 EIF6P56537 245 aaKnown RBP23.92■■□□□ 1.42
SREBF1-212ENST00000478616 GJA3Q9Y6H8 435 aa23.92■■□□□ 1.42
SREBF1-212ENST00000478616 EPHX2P34913 555 aa23.91■■□□□ 1.42
SREBF1-212ENST00000478616 FAM161AQ3B820 660 aa23.91■■□□□ 1.42
SREBF1-212ENST00000478616 KAZALD1Q96I82 304 aa23.91■■□□□ 1.42
SREBF1-212ENST00000478616 KCNQ5Q9NR82 932 aa23.91■■□□□ 1.42
SREBF1-212ENST00000478616 HACL1Q9UJ83 578 aa23.91■■□□□ 1.42
SREBF1-212ENST00000478616 IQCA1LA6NCM1 817 aa23.9■■□□□ 1.42
SREBF1-212ENST00000478616 EPS15P42566 896 aa23.9■■□□□ 1.42
SREBF1-212ENST00000478616 APLP1P51693 650 aa23.9■■□□□ 1.42
SREBF1-212ENST00000478616 BCL2L13Q9BXK5 485 aa23.9■■□□□ 1.42
SREBF1-212ENST00000478616 TMX4Q9H1E5 349 aaPredicted RBP23.9■■□□□ 1.42
SREBF1-212ENST00000478616 RIMBP2O15034 1052 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms