RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 TCIRG1Q13488 830 aa14.72□□□□□ -0.05
PDCD11-204ENST00000478543 WBP1LQ9NX94 342 aa14.72□□□□□ -0.05
PDCD11-204ENST00000478543 ZNF219Q9P2Y4 722 aaPredicted RBP14.72□□□□□ -0.05
PDCD11-204ENST00000478543 ANKRD36CQ5JPF3 1778 aa14.72□□□□□ -0.05
PDCD11-204ENST00000478543 ADAMTSL1Q8N6G6 1762 aa14.72□□□□□ -0.05
PDCD11-204ENST00000478543 ALDH1L1O75891 902 aa14.71□□□□□ -0.05
PDCD11-204ENST00000478543 HSPA8P11142 646 aaKnown RBP14.71□□□□□ -0.05
PDCD11-204ENST00000478543 ERFEQ4G0M1 354 aa14.71□□□□□ -0.05
PDCD11-204ENST00000478543 HSP90AB3PQ58FF7 597 aa14.71□□□□□ -0.05
PDCD11-204ENST00000478543 CCDC24Q8N4L8 307 aa14.71□□□□□ -0.05
PDCD11-204ENST00000478543 MEIS3Q99687 375 aa14.71□□□□□ -0.05
PDCD11-204ENST00000478543 ZNF652Q9Y2D9 606 aa14.71□□□□□ -0.05
PDCD11-204ENST00000478543 CACNA1SQ13698 1873 aa14.71□□□□□ -0.05
PDCD11-204ENST00000478543 ZBTB7BO15156 539 aaPredicted RBP14.7□□□□□ -0.06
PDCD11-204ENST00000478543 C21orf2O43822 256 aa14.7□□□□□ -0.06
PDCD11-204ENST00000478543 ITGBL1O95965 494 aaPredicted RBP14.7□□□□□ -0.06
PDCD11-204ENST00000478543 ISCA1Q9BUE6 129 aa14.7□□□□□ -0.06
PDCD11-204ENST00000478543 SLX4Q8IY92 1834 aa14.69□□□□□ -0.06
PDCD11-204ENST00000478543 GCKRQ14397 625 aa14.69□□□□□ -0.06
PDCD11-204ENST00000478543 DPY19L2Q6NUT2 758 aa14.69□□□□□ -0.06
PDCD11-204ENST00000478543 BICDL1Q6ZP65 573 aa14.69□□□□□ -0.06
PDCD11-204ENST00000478543 JARID2Q92833 1246 aaPredicted RBP14.69□□□□□ -0.06
PDCD11-204ENST00000478543 C1orf115Q9H7X2 142 aa14.69□□□□□ -0.06
PDCD11-204ENST00000478543 CWC25Q9NXE8 425 aaPredicted RBP14.69□□□□□ -0.06
PDCD11-204ENST00000478543 C9orf78Q9NZ63 289 aaPredicted RBP14.69□□□□□ -0.06
PDCD11-204ENST00000478543 FAM177BA6PVY3 158 aa14.68□□□□□ -0.06
PDCD11-204ENST00000478543 H0YIN7 160 aa14.68□□□□□ -0.06
PDCD11-204ENST00000478543 TBC1D9BQ66K14 1250 aa14.68□□□□□ -0.06
PDCD11-204ENST00000478543 NLRP10Q86W26 655 aa14.68□□□□□ -0.06
PDCD11-204ENST00000478543 ZNF34Q8IZ26 560 aa14.68□□□□□ -0.06
PDCD11-204ENST00000478543 CCDC191Q8NCU4 936 aa14.68□□□□□ -0.06
PDCD11-204ENST00000478543 USP44Q9H0E7 712 aa14.68□□□□□ -0.06
PDCD11-204ENST00000478543 CHMP4BQ9H444 224 aaKnown RBP14.68□□□□□ -0.06
PDCD11-204ENST00000478543 NIP7Q9Y221 180 aaKnown RBP eCLIP14.68□□□□□ -0.06
PDCD11-204ENST00000478543 UBN2Q6ZU65 1347 aa14.67□□□□□ -0.06
PDCD11-204ENST00000478543 SCN4AP35499 1836 aa14.67□□□□□ -0.06
PDCD11-204ENST00000478543 GRM8O00222 908 aa14.67□□□□□ -0.06
PDCD11-204ENST00000478543 GNAI3P08754 354 aa14.67□□□□□ -0.06
PDCD11-204ENST00000478543 NBPF7P0C2Y1 421 aaPredicted RBP14.67□□□□□ -0.06
PDCD11-204ENST00000478543 UBTFL1P0CB47 393 aaPredicted RBP14.67□□□□□ -0.06
PDCD11-204ENST00000478543 RTL5Q5HYW3 569 aaPredicted RBP14.67□□□□□ -0.06
PDCD11-204ENST00000478543 CLEC4GQ6UXB4 293 aa14.67□□□□□ -0.06
PDCD11-204ENST00000478543 ZBTB40Q9NUA8 1239 aa14.67□□□□□ -0.06
PDCD11-204ENST00000478543 THSD7BQ9C0I4 1608 aa14.66□□□□□ -0.06
PDCD11-204ENST00000478543 TRIM28Q13263 835 aaKnown RBP14.66□□□□□ -0.06
PDCD11-204ENST00000478543 ERICH6BQ5W0A0 696 aa14.66□□□□□ -0.06
PDCD11-204ENST00000478543 UBE3BQ7Z3V4 1068 aa14.66□□□□□ -0.06
PDCD11-204ENST00000478543 AIDAQ96BJ3 306 aa14.66□□□□□ -0.06
PDCD11-204ENST00000478543 TAF1DQ9H5J8 278 aaPredicted RBP14.66□□□□□ -0.06
PDCD11-204ENST00000478543 TMEM88BA6NKF7 163 aa14.65□□□□□ -0.06
PDCD11-204ENST00000478543 RGL2O15211 777 aa14.65□□□□□ -0.06
PDCD11-204ENST00000478543 PARP10Q53GL7 1025 aa14.65□□□□□ -0.06
PDCD11-204ENST00000478543 SUSD4Q5VX71 490 aa14.65□□□□□ -0.06
PDCD11-204ENST00000478543 LDHDQ86WU2 507 aa14.65□□□□□ -0.06
PDCD11-204ENST00000478543 ZNF622Q969S3 477 aaKnown RBP eCLIP14.65□□□□□ -0.06
PDCD11-204ENST00000478543 LRRFIP2Q9Y608 721 aaKnown RBP14.65□□□□□ -0.06
PDCD11-204ENST00000478543 LTBP3Q9NS15 1303 aa14.65□□□□□ -0.06
PDCD11-204ENST00000478543 RASSF10A6NK89 507 aa14.64□□□□□ -0.07
PDCD11-204ENST00000478543 GNAI2P04899 355 aa14.64□□□□□ -0.07
PDCD11-204ENST00000478543 RGS19P49795 217 aa14.64□□□□□ -0.07
PDCD11-204ENST00000478543 PRR5LQ6MZQ0 368 aa14.64□□□□□ -0.07
PDCD11-204ENST00000478543 FAM89AQ96GI7 184 aa14.64□□□□□ -0.07
PDCD11-204ENST00000478543 SUCLG2Q96I99 432 aa14.64□□□□□ -0.07
PDCD11-204ENST00000478543 L3MBTL3Q96JM7 780 aaPredicted RBP14.64□□□□□ -0.07
PDCD11-204ENST00000478543 SETDB2Q96T68 719 aa14.64□□□□□ -0.07
PDCD11-204ENST00000478543 TAOK3Q9H2K8 898 aa14.64□□□□□ -0.07
PDCD11-204ENST00000478543 PPP4R2Q9NY27 417 aa14.64□□□□□ -0.07
PDCD11-204ENST00000478543 PCDH10Q9P2E7 1040 aa14.64□□□□□ -0.07
PDCD11-204ENST00000478543 TRMT112Q9UI30 125 aaKnown RBP14.64□□□□□ -0.07
PDCD11-204ENST00000478543 UTYO14607 1347 aa14.64□□□□□ -0.07
PDCD11-204ENST00000478543 ZNF541Q9H0D2 1346 aa14.64□□□□□ -0.07
PDCD11-204ENST00000478543 IBTKQ9P2D0 1353 aaPredicted RBP14.63□□□□□ -0.07
PDCD11-204ENST00000478543 H7C1W4 665 aa14.63□□□□□ -0.07
PDCD11-204ENST00000478543 PCCAP05165 728 aaPredicted RBP14.63□□□□□ -0.07
PDCD11-204ENST00000478543 MLLT1Q03111 559 aaPredicted RBP14.63□□□□□ -0.07
PDCD11-204ENST00000478543 AAMPQ13685 434 aa14.63□□□□□ -0.07
PDCD11-204ENST00000478543 PPP1R42Q7Z4L9 355 aa14.63□□□□□ -0.07
PDCD11-204ENST00000478543 SYNE4Q8N205 404 aa14.63□□□□□ -0.07
PDCD11-204ENST00000478543 UTP14AQ9BVJ6 771 aaKnown RBP14.63□□□□□ -0.07
PDCD11-204ENST00000478543 PCDHB15Q9Y5E8 787 aa14.63□□□□□ -0.07
PDCD11-204ENST00000478543 NTSR2O95665 410 aa14.62□□□□□ -0.07
PDCD11-204ENST00000478543 CASP7P55210 303 aa14.62□□□□□ -0.07
PDCD11-204ENST00000478543 FMR1Q06787 632 aaKnown RBP eCLIP14.62□□□□□ -0.07
PDCD11-204ENST00000478543 LTBP1Q14766 1721 aa14.62□□□□□ -0.07
PDCD11-204ENST00000478543 ZBTB38Q8NAP3 1195 aaPredicted RBP14.62□□□□□ -0.07
PDCD11-204ENST00000478543 WDR33Q9C0J8 1336 aaKnown RBP14.62□□□□□ -0.07
PDCD11-204ENST00000478543 CCDC85CA6NKD9 419 aa14.61□□□□□ -0.07
PDCD11-204ENST00000478543 EAPPQ56P03 285 aaPredicted RBP14.61□□□□□ -0.07
PDCD11-204ENST00000478543 MAP1SQ66K74 1059 aaPredicted RBP14.61□□□□□ -0.07
PDCD11-204ENST00000478543 B4GALNT3Q6L9W6 998 aa14.61□□□□□ -0.07
PDCD11-204ENST00000478543 PRPF40BQ6NWY9 871 aaKnown RBP14.61□□□□□ -0.07
PDCD11-204ENST00000478543 OLFM4Q6UX06 510 aa14.61□□□□□ -0.07
PDCD11-204ENST00000478543 NBPF5PQ86XG9 351 aaPredicted RBP14.61□□□□□ -0.07
PDCD11-204ENST00000478543 NUTM1Q86Y26 1132 aa14.61□□□□□ -0.07
PDCD11-204ENST00000478543 BRIP1Q9BX63 1249 aa14.61□□□□□ -0.07
PDCD11-204ENST00000478543 SH3TC1Q8TE82 1336 aa14.61□□□□□ -0.07
PDCD11-204ENST00000478543 GTF2E1P29083 439 aaPredicted RBP14.6□□□□□ -0.07
PDCD11-204ENST00000478543 EPHA10Q5JZY3 1008 aa14.6□□□□□ -0.07
PDCD11-204ENST00000478543 CEP85Q6P2H3 762 aa14.6□□□□□ -0.07
PDCD11-204ENST00000478543 KAZALD1Q96I82 304 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms