RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 CRB1P82279 1406 aa14.26□□□□□ -0.13
PCCB-214ENST00000478469 ZC3H12CQ9C0D7 883 aaKnown RBP14.25□□□□□ -0.13
PCCB-214ENST00000478469 C3P01024 1663 aa14.25□□□□□ -0.13
PCCB-214ENST00000478469 TRIM22Q8IYM9 498 aa14.25□□□□□ -0.13
PCCB-214ENST00000478469 NUP133Q8WUM0 1156 aa14.25□□□□□ -0.13
PCCB-214ENST00000478469 MAP3K15Q6ZN16 1313 aa14.25□□□□□ -0.13
PCCB-214ENST00000478469 TIMM10P62072 90 aa14.25□□□□□ -0.13
PCCB-214ENST00000478469 BICD2Q8TD16 824 aa14.25□□□□□ -0.13
PCCB-214ENST00000478469 ANKRD2Q9GZV1 360 aa14.25□□□□□ -0.13
PCCB-214ENST00000478469 CWC22Q9HCG8 908 aaKnown RBP14.25□□□□□ -0.13
PCCB-214ENST00000478469 KDM4AO75164 1064 aa14.25□□□□□ -0.13
PCCB-214ENST00000478469 VSIG10Q8N0Z9 540 aa14.25□□□□□ -0.13
PCCB-214ENST00000478469 GIGYF2Q6Y7W6 1299 aaKnown RBP14.24□□□□□ -0.13
PCCB-214ENST00000478469 BAG3O95817 575 aa14.24□□□□□ -0.13
PCCB-214ENST00000478469 DRC7Q8IY82 874 aa14.24□□□□□ -0.13
PCCB-214ENST00000478469 ZNF594Q96JF6 807 aaPredicted RBP14.24□□□□□ -0.13
PCCB-214ENST00000478469 MKNK2Q9HBH9 465 aa14.23□□□□□ -0.13
PCCB-214ENST00000478469 PAG1Q9NWQ8 432 aa14.23□□□□□ -0.13
PCCB-214ENST00000478469 SPATA31A6Q5VVP1 1343 aa14.23□□□□□ -0.13
PCCB-214ENST00000478469 MST1RQ04912 1400 aa14.23□□□□□ -0.13
PCCB-214ENST00000478469 A0A1B0GUL7 405 aa14.23□□□□□ -0.13
PCCB-214ENST00000478469 ZGPATQ8N5A5 531 aaKnown RBP14.23□□□□□ -0.13
PCCB-214ENST00000478469 FLAD1Q8NFF5 587 aa14.23□□□□□ -0.13
PCCB-214ENST00000478469 LRRC7Q96NW7 1537 aa14.23□□□□□ -0.13
PCCB-214ENST00000478469 HMGB1P09429 215 aaKnown RBP14.23□□□□□ -0.13
PCCB-214ENST00000478469 SLC9C2Q5TAH2 1124 aa14.23□□□□□ -0.13
PCCB-214ENST00000478469 ARHGEF28Q8N1W1 1705 aaKnown RBP14.23□□□□□ -0.13
PCCB-214ENST00000478469 CCDC24Q8N4L8 307 aa14.23□□□□□ -0.13
PCCB-214ENST00000478469 RNF41Q9H4P4 317 aaPredicted RBP14.23□□□□□ -0.13
PCCB-214ENST00000478469 ZBTB38Q8NAP3 1195 aaPredicted RBP14.22□□□□□ -0.13
PCCB-214ENST00000478469 SSH3Q8TE77 659 aa14.22□□□□□ -0.13
PCCB-214ENST00000478469 GOLGA6L3A6NEY3 463 aa14.22□□□□□ -0.13
PCCB-214ENST00000478469 PCCAP05165 728 aaPredicted RBP14.22□□□□□ -0.13
PCCB-214ENST00000478469 TPM4P67936 248 aa14.22□□□□□ -0.13
PCCB-214ENST00000478469 ZNF804AQ7Z570 1209 aa14.22□□□□□ -0.13
PCCB-214ENST00000478469 RBM17Q96I25 401 aaKnown RBP14.22□□□□□ -0.13
PCCB-214ENST00000478469 GJD4Q96KN9 370 aaPredicted RBP14.22□□□□□ -0.13
PCCB-214ENST00000478469 KCNQ4P56696 695 aa14.22□□□□□ -0.13
PCCB-214ENST00000478469 TNNI3KQ59H18 835 aa14.22□□□□□ -0.13
PCCB-214ENST00000478469 CRACR2BQ8N4Y2 399 aaPredicted RBP14.22□□□□□ -0.13
PCCB-214ENST00000478469 ESYT1Q9BSJ8 1104 aa14.22□□□□□ -0.13
PCCB-214ENST00000478469 FPGT-TNNI3KV9GXZ4 949 aa14.22□□□□□ -0.13
PCCB-214ENST00000478469 CYP7A1P22680 504 aa14.21□□□□□ -0.13
PCCB-214ENST00000478469 CDKL5O76039 1030 aa14.21□□□□□ -0.13
PCCB-214ENST00000478469 LARP1BQ659C4 914 aaKnown RBP14.21□□□□□ -0.13
PCCB-214ENST00000478469 DBNDD2Q9BQY9 259 aa14.21□□□□□ -0.13
PCCB-214ENST00000478469 PALLDQ8WX93 1383 aa14.21□□□□□ -0.13
PCCB-214ENST00000478469 IQCA1Q86XH1 822 aa14.21□□□□□ -0.14
PCCB-214ENST00000478469 ATP2B1P20020 1258 aa14.2□□□□□ -0.14
PCCB-214ENST00000478469 MCMDC2Q4G0Z9 681 aa14.2□□□□□ -0.14
PCCB-214ENST00000478469 USPL1Q5W0Q7 1092 aa14.2□□□□□ -0.14
PCCB-214ENST00000478469 RANBP6O60518 1105 aaKnown RBP14.2□□□□□ -0.14
PCCB-214ENST00000478469 PUM3Q15397 648 aaKnown RBP14.2□□□□□ -0.14
PCCB-214ENST00000478469 NAA16Q6N069 864 aaPredicted RBP14.2□□□□□ -0.14
PCCB-214ENST00000478469 OTUD7AQ8TE49 926 aaPredicted RBP14.2□□□□□ -0.14
PCCB-214ENST00000478469 DNTTIP2Q5QJE6 756 aaKnown RBP14.2□□□□□ -0.14
PCCB-214ENST00000478469 ATG3Q9NT62 314 aa14.2□□□□□ -0.14
PCCB-214ENST00000478469 GSTO1P78417 241 aa14.2□□□□□ -0.14
PCCB-214ENST00000478469 ZNF444Q8N0Y2 327 aaPredicted RBP14.2□□□□□ -0.14
PCCB-214ENST00000478469 HMG20BQ9P0W2 317 aa14.2□□□□□ -0.14
PCCB-214ENST00000478469 WWC3Q9ULE0 1092 aa14.2□□□□□ -0.14
PCCB-214ENST00000478469 SIGLEC1Q9BZZ2 1709 aa14.2□□□□□ -0.14
PCCB-214ENST00000478469 MYO5BQ9ULV0 1848 aa14.2□□□□□ -0.14
PCCB-214ENST00000478469 UBR1Q8IWV7 1749 aa14.19□□□□□ -0.14
PCCB-214ENST00000478469 HAND2P61296 217 aa14.19□□□□□ -0.14
PCCB-214ENST00000478469 CCDC73Q6ZRK6 1079 aa14.19□□□□□ -0.14
PCCB-214ENST00000478469 TCEAL9Q9UHQ7 104 aa14.19□□□□□ -0.14
PCCB-214ENST00000478469 CTSWP56202 376 aa14.19□□□□□ -0.14
PCCB-214ENST00000478469 TBC1D32Q96NH3 1257 aa14.19□□□□□ -0.14
PCCB-214ENST00000478469 KDM2BQ8NHM5 1336 aa14.19□□□□□ -0.14
PCCB-214ENST00000478469 WDR33Q9C0J8 1336 aaKnown RBP14.19□□□□□ -0.14
PCCB-214ENST00000478469 RBM6P78332 1123 aaKnown RBP14.19□□□□□ -0.14
PCCB-214ENST00000478469 EYA3Q99504 573 aa14.19□□□□□ -0.14
PCCB-214ENST00000478469 CRNKL1Q9BZJ0 848 aaKnown RBP14.19□□□□□ -0.14
PCCB-214ENST00000478469 CLSTN1O94985 981 aa14.18□□□□□ -0.14
PCCB-214ENST00000478469 USP32Q8NFA0 1604 aa14.18□□□□□ -0.14
PCCB-214ENST00000478469 RPS8P62241 208 aaKnown RBP14.18□□□□□ -0.14
PCCB-214ENST00000478469 VPS72Q15906 364 aa14.18□□□□□ -0.14
PCCB-214ENST00000478469 OVOS2A0A0G2JMS6 1433 aa14.18□□□□□ -0.14
PCCB-214ENST00000478469 POLR1AO95602 1720 aaPredicted RBP14.17□□□□□ -0.14
PCCB-214ENST00000478469 NLGN1Q8N2Q7 840 aa14.17□□□□□ -0.14
PCCB-214ENST00000478469 XAGE2Q96GT9 111 aa14.17□□□□□ -0.14
PCCB-214ENST00000478469 SH2B1Q9NRF2 756 aaPredicted RBP14.17□□□□□ -0.14
PCCB-214ENST00000478469 ITSN1Q15811 1721 aa14.17□□□□□ -0.14
PCCB-214ENST00000478469 NMIQ13287 307 aaPredicted RBP14.17□□□□□ -0.14
PCCB-214ENST00000478469 NFKBIBQ15653 356 aa14.17□□□□□ -0.14
PCCB-214ENST00000478469 LPIN2Q92539 896 aa14.17□□□□□ -0.14
PCCB-214ENST00000478469 CIZ1Q9ULV3 898 aaPredicted RBP14.17□□□□□ -0.14
PCCB-214ENST00000478469 LIMCH1Q9UPQ0 1083 aa14.17□□□□□ -0.14
PCCB-214ENST00000478469 IFIT3O14879 490 aaKnown RBP14.17□□□□□ -0.14
PCCB-214ENST00000478469 CCDC83Q8IWF9 413 aa14.17□□□□□ -0.14
PCCB-214ENST00000478469 NEK1Q96PY6 1258 aa14.17□□□□□ -0.14
PCCB-214ENST00000478469 RBM8AQ9Y5S9 174 aaKnown RBP14.17□□□□□ -0.14
PCCB-214ENST00000478469 CD163L1Q9NR16 1453 aa14.17□□□□□ -0.14
PCCB-214ENST00000478469 ERVV-1B6SEH8 477 aa14.16□□□□□ -0.14
PCCB-214ENST00000478469 MPHOSPH10O00566 681 aaKnown RBP14.16□□□□□ -0.14
PCCB-214ENST00000478469 RNF113AO15541 343 aaKnown RBP14.16□□□□□ -0.14
PCCB-214ENST00000478469 TAF5LO75529 589 aa14.16□□□□□ -0.14
PCCB-214ENST00000478469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.16□□□□□ -0.14
PCCB-214ENST00000478469 H0YIN7 160 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms