RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 PPEF1O14829 653 aaPredicted RBP10.07□□□□□ -0.8
DDX39B-218ENST00000478365 PDE8AO60658 829 aa10.07□□□□□ -0.8
DDX39B-218ENST00000478365 ALDH1L1O75891 902 aa10.07□□□□□ -0.8
DDX39B-218ENST00000478365 BRPF1P55201 1214 aaPredicted RBP10.07□□□□□ -0.8
DDX39B-218ENST00000478365 HNRNPUQ00839 825 aaKnown RBP eCLIP10.07□□□□□ -0.8
DDX39B-218ENST00000478365 GRAPQ13588 217 aa10.07□□□□□ -0.8
DDX39B-218ENST00000478365 GRAPLQ8TC17 118 aaPredicted RBP10.07□□□□□ -0.8
DDX39B-218ENST00000478365 FAM89AQ96GI7 184 aa10.07□□□□□ -0.8
DDX39B-218ENST00000478365 GPBP1L1Q9HC44 474 aaPredicted RBP10.07□□□□□ -0.8
DDX39B-218ENST00000478365 ABCC4O15439 1325 aa10.07□□□□□ -0.8
DDX39B-218ENST00000478365 ZBED9Q6R2W3 1325 aa10.07□□□□□ -0.8
DDX39B-218ENST00000478365 KIF16BQ96L93 1317 aa10.07□□□□□ -0.8
DDX39B-218ENST00000478365 NFKBIEO00221 500 aa10.06□□□□□ -0.8
DDX39B-218ENST00000478365 HCLS1P14317 486 aaPredicted RBP10.06□□□□□ -0.8
DDX39B-218ENST00000478365 G2E3Q7L622 706 aa10.06□□□□□ -0.8
DDX39B-218ENST00000478365 PLA2G12BQ9BX93 195 aa10.06□□□□□ -0.8
DDX39B-218ENST00000478365 ATP6V0A2Q9Y487 856 aa10.06□□□□□ -0.8
DDX39B-218ENST00000478365 CCDC88AQ3V6T2 1871 aa10.06□□□□□ -0.8
DDX39B-218ENST00000478365 TIAM2Q8IVF5 1701 aa10.05□□□□□ -0.8
DDX39B-218ENST00000478365 RTL9Q8NET4 1388 aa10.05□□□□□ -0.8
DDX39B-218ENST00000478365 H7C1W4 665 aa10.05□□□□□ -0.8
DDX39B-218ENST00000478365 TCERG1O14776 1098 aaKnown RBP10.05□□□□□ -0.8
DDX39B-218ENST00000478365 IGKV5-2P06315 115 aa10.05□□□□□ -0.8
DDX39B-218ENST00000478365 GCKRQ14397 625 aa10.05□□□□□ -0.8
DDX39B-218ENST00000478365 DPY19L2Q6NUT2 758 aa10.05□□□□□ -0.8
DDX39B-218ENST00000478365 SP8Q8IXZ3 490 aa10.05□□□□□ -0.8
DDX39B-218ENST00000478365 CDC5LQ99459 802 aaKnown RBP10.05□□□□□ -0.8
DDX39B-218ENST00000478365 SMC4Q9NTJ3 1288 aa10.05□□□□□ -0.8
DDX39B-218ENST00000478365 HDAC5Q9UQL6 1122 aa10.05□□□□□ -0.8
DDX39B-218ENST00000478365 KCNA4P22459 653 aa10.04□□□□□ -0.8
DDX39B-218ENST00000478365 CTSWP56202 376 aa10.04□□□□□ -0.8
DDX39B-218ENST00000478365 RASSF7Q02833 373 aa10.04□□□□□ -0.8
DDX39B-218ENST00000478365 BEND3Q5T5X7 828 aa10.04□□□□□ -0.8
DDX39B-218ENST00000478365 UBE3BQ7Z3V4 1068 aa10.04□□□□□ -0.8
DDX39B-218ENST00000478365 MRPL50Q8N5N7 158 aaKnown RBP10.04□□□□□ -0.8
DDX39B-218ENST00000478365 JDP2Q8WYK2 163 aa10.04□□□□□ -0.8
DDX39B-218ENST00000478365 SSH1Q8WYL5 1049 aa10.04□□□□□ -0.8
DDX39B-218ENST00000478365 CDCA7LQ96GN5 454 aa10.04□□□□□ -0.8
DDX39B-218ENST00000478365 API5Q9BZZ5 524 aaKnown RBP10.04□□□□□ -0.8
DDX39B-218ENST00000478365 SRCIN1Q9C0H9 1055 aa10.04□□□□□ -0.8
DDX39B-218ENST00000478365 ZNF219Q9P2Y4 722 aaPredicted RBP10.04□□□□□ -0.8
DDX39B-218ENST00000478365 LRRC37AA6NMS7 1700 aa10.04□□□□□ -0.8
DDX39B-218ENST00000478365 GRM8O00222 908 aa10.03□□□□□ -0.8
DDX39B-218ENST00000478365 IPO8O15397 1037 aaKnown RBP10.03□□□□□ -0.8
DDX39B-218ENST00000478365 IARSP41252 1262 aaKnown RBP10.03□□□□□ -0.8
DDX39B-218ENST00000478365 RPS8P62241 208 aaKnown RBP10.03□□□□□ -0.8
DDX39B-218ENST00000478365 CWF19L2Q2TBE0 894 aaKnown RBP10.03□□□□□ -0.8
DDX39B-218ENST00000478365 DPP8Q6V1X1 898 aaPredicted RBP10.03□□□□□ -0.8
DDX39B-218ENST00000478365 C3orf67Q6ZVT6 689 aa10.03□□□□□ -0.8
DDX39B-218ENST00000478365 MPNDQ8N594 471 aa10.03□□□□□ -0.8
DDX39B-218ENST00000478365 RTFDC1Q9BY42 306 aaPredicted RBP10.03□□□□□ -0.8
DDX39B-218ENST00000478365 C9orf78Q9NZ63 289 aaPredicted RBP10.03□□□□□ -0.8
DDX39B-218ENST00000478365 SNED1Q8TER0 1413 aa10.02□□□□□ -0.81
DDX39B-218ENST00000478365 GLTPD2A6NH11 291 aa10.02□□□□□ -0.81
DDX39B-218ENST00000478365 CCT4P50991 539 aaKnown RBP10.02□□□□□ -0.81
DDX39B-218ENST00000478365 RTL5Q5HYW3 569 aaPredicted RBP10.02□□□□□ -0.81
DDX39B-218ENST00000478365 ANKRD18AQ8IVF6 992 aa10.02□□□□□ -0.81
DDX39B-218ENST00000478365 SYNE4Q8N205 404 aa10.02□□□□□ -0.81
DDX39B-218ENST00000478365 ARHGAP45Q92619 1136 aa10.02□□□□□ -0.81
DDX39B-218ENST00000478365 EYA3Q99504 573 aa10.02□□□□□ -0.81
DDX39B-218ENST00000478365 IGHMBP2P38935 993 aaKnown RBP10.01□□□□□ -0.81
DDX39B-218ENST00000478365 RARSP54136 660 aaKnown RBP10.01□□□□□ -0.81
DDX39B-218ENST00000478365 SLC4A10Q6U841 1118 aa10.01□□□□□ -0.81
DDX39B-218ENST00000478365 NIM1KQ8IY84 436 aa10.01□□□□□ -0.81
DDX39B-218ENST00000478365 C16orf71Q8IYS4 520 aaPredicted RBP10.01□□□□□ -0.81
DDX39B-218ENST00000478365 LARGE2Q8N3Y3 721 aa10.01□□□□□ -0.81
DDX39B-218ENST00000478365 IQCA1LA6NCM1 817 aa10□□□□□ -0.81
DDX39B-218ENST00000478365 F6X3S4 739 aa10□□□□□ -0.81
DDX39B-218ENST00000478365 CASP7P55210 303 aa10□□□□□ -0.81
DDX39B-218ENST00000478365 EIF6P56537 245 aaKnown RBP10□□□□□ -0.81
DDX39B-218ENST00000478365 TTLL11Q8NHH1 800 aa10□□□□□ -0.81
DDX39B-218ENST00000478365 ZNF277Q9NRM2 450 aaPredicted RBP10□□□□□ -0.81
DDX39B-218ENST00000478365 BSDC1Q9NW68 430 aaPredicted RBP10□□□□□ -0.81
DDX39B-218ENST00000478365 PODXL2Q9NZ53 605 aa10□□□□□ -0.81
DDX39B-218ENST00000478365 UTYO14607 1347 aa10□□□□□ -0.81
DDX39B-218ENST00000478365 XDHP47989 1333 aa10□□□□□ -0.81
DDX39B-218ENST00000478365 WDR90Q96KV7 1748 aa9.99□□□□□ -0.81
DDX39B-218ENST00000478365 SCN4AP35499 1836 aa9.99□□□□□ -0.81
DDX39B-218ENST00000478365 ANKRD18BA2A2Z9 1011 aa9.99□□□□□ -0.81
DDX39B-218ENST00000478365 PPIP5K2O43314 1243 aa9.99□□□□□ -0.81
DDX39B-218ENST00000478365 CSF1RP07333 972 aa9.99□□□□□ -0.81
DDX39B-218ENST00000478365 VEGFAP15692 232 aaPredicted RBP9.99□□□□□ -0.81
DDX39B-218ENST00000478365 KIAA2012Q0VF49 1180 aa9.99□□□□□ -0.81
DDX39B-218ENST00000478365 IFIT5Q13325 482 aaKnown RBP9.99□□□□□ -0.81
DDX39B-218ENST00000478365 CELF1Q92879 486 aaKnown RBP9.99□□□□□ -0.81
DDX39B-218ENST00000478365 L3MBTL3Q96JM7 780 aaPredicted RBP9.99□□□□□ -0.81
DDX39B-218ENST00000478365 ANKRD2Q9GZV1 360 aa9.99□□□□□ -0.81
DDX39B-218ENST00000478365 FZD9O00144 591 aa9.98□□□□□ -0.81
DDX39B-218ENST00000478365 ITGA6P23229 1130 aa9.98□□□□□ -0.81
DDX39B-218ENST00000478365 ATP2B4P23634 1241 aa9.98□□□□□ -0.81
DDX39B-218ENST00000478365 CCDC57Q2TAC2 916 aa9.98□□□□□ -0.81
DDX39B-218ENST00000478365 GPC2Q8N158 579 aa9.98□□□□□ -0.81
DDX39B-218ENST00000478365 RBM46Q8TBY0 533 aaKnown RBP9.98□□□□□ -0.81
DDX39B-218ENST00000478365 ZNF526Q8TF50 670 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-218ENST00000478365 MPHOSPH8Q99549 860 aa9.98□□□□□ -0.81
DDX39B-218ENST00000478365 BCL2L13Q9BXK5 485 aa9.98□□□□□ -0.81
DDX39B-218ENST00000478365 ANKIB1Q9P2G1 1089 aa9.98□□□□□ -0.81
DDX39B-218ENST00000478365 GGA1Q9UJY5 639 aa9.98□□□□□ -0.81
DDX39B-218ENST00000478365 U3KPZ7 1027 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-218ENST00000478365 TOMM70O94826 608 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms