RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ISCA1Q9BUE6 129 aa18.66■□□□□ 0.58
SMARCE1-209ENST00000478349 CDHR2Q9BYE9 1310 aa18.66■□□□□ 0.58
SMARCE1-209ENST00000478349 KIAA2012Q0VF49 1180 aa18.65■□□□□ 0.58
SMARCE1-209ENST00000478349 TNIP1Q15025 636 aa18.65■□□□□ 0.58
SMARCE1-209ENST00000478349 CCDC30Q5VVM6 783 aa18.65■□□□□ 0.58
SMARCE1-209ENST00000478349 CNTROBQ8N137 903 aa18.65■□□□□ 0.58
SMARCE1-209ENST00000478349 MKRN1Q9UHC7 482 aaKnown RBP18.65■□□□□ 0.58
SMARCE1-209ENST00000478349 CNTNAP1P78357 1384 aa18.65■□□□□ 0.58
SMARCE1-209ENST00000478349 HSPA1AP0DMV8 641 aaKnown RBP18.64■□□□□ 0.57
SMARCE1-209ENST00000478349 HSPA1BP0DMV9 641 aaKnown RBP18.64■□□□□ 0.57
SMARCE1-209ENST00000478349 ATP5J2-PTCD1G3V325 749 aa18.63■□□□□ 0.57
SMARCE1-209ENST00000478349 ITGBL1O95965 494 aaPredicted RBP18.63■□□□□ 0.57
SMARCE1-209ENST00000478349 SCNN1DP51172 638 aa18.63■□□□□ 0.57
SMARCE1-209ENST00000478349 SF3B3Q15393 1217 aaKnown RBP18.63■□□□□ 0.57
SMARCE1-209ENST00000478349 FAM89AQ96GI7 184 aa18.63■□□□□ 0.57
SMARCE1-209ENST00000478349 ADARB2Q9NS39 739 aaKnown RBP18.63■□□□□ 0.57
SMARCE1-209ENST00000478349 IRS4O14654 1257 aaPredicted RBP18.62■□□□□ 0.57
SMARCE1-209ENST00000478349 MAP1SQ66K74 1059 aaPredicted RBP18.62■□□□□ 0.57
SMARCE1-209ENST00000478349 CIAPIN1Q6FI81 312 aa18.62■□□□□ 0.57
SMARCE1-209ENST00000478349 ZBTB38Q8NAP3 1195 aaPredicted RBP18.62■□□□□ 0.57
SMARCE1-209ENST00000478349 COL4A5P29400 1685 aa18.61■□□□□ 0.57
SMARCE1-209ENST00000478349 CCDC191Q8NCU4 936 aa18.61■□□□□ 0.57
SMARCE1-209ENST00000478349 AIDAQ96BJ3 306 aa18.61■□□□□ 0.57
SMARCE1-209ENST00000478349 EYA3Q99504 573 aa18.61■□□□□ 0.57
SMARCE1-209ENST00000478349 BCL2L13Q9BXK5 485 aa18.61■□□□□ 0.57
SMARCE1-209ENST00000478349 STK31Q9BXU1 1019 aa18.61■□□□□ 0.57
SMARCE1-209ENST00000478349 GPRC5DQ9NZD1 345 aa18.61■□□□□ 0.57
SMARCE1-209ENST00000478349 ADAMTSL1Q8N6G6 1762 aa18.6■□□□□ 0.57
SMARCE1-209ENST00000478349 ELL2O00472 640 aaPredicted RBP18.6■□□□□ 0.57
SMARCE1-209ENST00000478349 EPS15P42566 896 aa18.6■□□□□ 0.57
SMARCE1-209ENST00000478349 CCDC27Q2M243 656 aa18.6■□□□□ 0.57
SMARCE1-209ENST00000478349 ABT1Q9ULW3 272 aaKnown RBP18.6■□□□□ 0.57
SMARCE1-209ENST00000478349 CXCL9Q07325 125 aa18.59■□□□□ 0.57
SMARCE1-209ENST00000478349 WASHC4Q2M389 1173 aa18.59■□□□□ 0.57
SMARCE1-209ENST00000478349 CCDC152Q4G0S7 254 aa18.59■□□□□ 0.57
SMARCE1-209ENST00000478349 CWC25Q9NXE8 425 aaPredicted RBP18.59■□□□□ 0.57
SMARCE1-209ENST00000478349 NSFL1CQ9UNZ2 370 aaKnown RBP18.59■□□□□ 0.57
SMARCE1-209ENST00000478349 GMPSP49915 693 aaPredicted RBP18.58■□□□□ 0.56
SMARCE1-209ENST00000478349 NEXNQ0ZGT2 675 aa18.58■□□□□ 0.56
SMARCE1-209ENST00000478349 RTL5Q5HYW3 569 aaPredicted RBP18.58■□□□□ 0.56
SMARCE1-209ENST00000478349 TNS4Q8IZW8 715 aa18.58■□□□□ 0.56
SMARCE1-209ENST00000478349 MYD88Q99836 296 aa18.58■□□□□ 0.56
SMARCE1-209ENST00000478349 RASSF10A6NK89 507 aa18.57■□□□□ 0.56
SMARCE1-209ENST00000478349 C6orf229H3BNL8 230 aa18.57■□□□□ 0.56
SMARCE1-209ENST00000478349 ANP32CO43423 234 aa18.57■□□□□ 0.56
SMARCE1-209ENST00000478349 PCCAP05165 728 aaPredicted RBP18.57■□□□□ 0.56
SMARCE1-209ENST00000478349 RPS8P62241 208 aaKnown RBP18.57■□□□□ 0.56
SMARCE1-209ENST00000478349 DEFB115Q30KQ5 88 aa18.57■□□□□ 0.56
SMARCE1-209ENST00000478349 NCBP3Q53F19 620 aaKnown RBP18.57■□□□□ 0.56
SMARCE1-209ENST00000478349 COL13A1Q5TAT6 717 aaPredicted RBP18.57■□□□□ 0.56
SMARCE1-209ENST00000478349 PHAXQ9H814 394 aaKnown RBP18.57■□□□□ 0.56
SMARCE1-209ENST00000478349 IL16Q14005 1332 aa18.56■□□□□ 0.56
SMARCE1-209ENST00000478349 H7C1D1 291 aa18.56■□□□□ 0.56
SMARCE1-209ENST00000478349 RAD17O75943 681 aa18.56■□□□□ 0.56
SMARCE1-209ENST00000478349 SLC51AQ86UW1 340 aa18.56■□□□□ 0.56
SMARCE1-209ENST00000478349 C8orf58Q8NAV2 365 aa18.56■□□□□ 0.56
SMARCE1-209ENST00000478349 ZC3H15Q8WU90 426 aaKnown RBP18.56■□□□□ 0.56
SMARCE1-209ENST00000478349 CELF1Q92879 486 aaKnown RBP18.56■□□□□ 0.56
SMARCE1-209ENST00000478349 METTL22Q9BUU2 404 aaPredicted RBP18.56■□□□□ 0.56
SMARCE1-209ENST00000478349 G3V3G9 751 aa18.55■□□□□ 0.56
SMARCE1-209ENST00000478349 PDE8AO60658 829 aa18.55■□□□□ 0.56
SMARCE1-209ENST00000478349 ECE1P42892 770 aa18.55■□□□□ 0.56
SMARCE1-209ENST00000478349 VEGFBP49765 207 aa18.55■□□□□ 0.56
SMARCE1-209ENST00000478349 DCAF8Q5TAQ9 597 aa18.55■□□□□ 0.56
SMARCE1-209ENST00000478349 ZNF428Q96B54 188 aa18.55■□□□□ 0.56
SMARCE1-209ENST00000478349 MRS2Q9HD23 443 aa18.55■□□□□ 0.56
SMARCE1-209ENST00000478349 LAMB2P55268 1798 aa18.55■□□□□ 0.56
SMARCE1-209ENST00000478349 LRRC37AA6NMS7 1700 aa18.54■□□□□ 0.56
SMARCE1-209ENST00000478349 RPS12P25398 132 aaKnown RBP18.54■□□□□ 0.56
SMARCE1-209ENST00000478349 ANKIB1Q9P2G1 1089 aa18.54■□□□□ 0.56
SMARCE1-209ENST00000478349 MAP2K1Q02750 393 aaPredicted RBP18.53■□□□□ 0.56
SMARCE1-209ENST00000478349 TWISTNBQ3B726 338 aaPredicted RBP18.53■□□□□ 0.56
SMARCE1-209ENST00000478349 KSR2Q6VAB6 950 aa18.53■□□□□ 0.56
SMARCE1-209ENST00000478349 PAXIP1Q6ZW49 1069 aaPredicted RBP18.53■□□□□ 0.56
SMARCE1-209ENST00000478349 WWC1Q8IX03 1113 aa18.53■□□□□ 0.56
SMARCE1-209ENST00000478349 DPF2Q92785 391 aa18.53■□□□□ 0.56
SMARCE1-209ENST00000478349 CDC5LQ99459 802 aaKnown RBP18.53■□□□□ 0.56
SMARCE1-209ENST00000478349 ZC3H12CQ9C0D7 883 aaKnown RBP18.53■□□□□ 0.56
SMARCE1-209ENST00000478349 MAP3K2Q9Y2U5 619 aa18.53■□□□□ 0.56
SMARCE1-209ENST00000478349 DDX60Q8IY21 1712 aaKnown RBP18.52■□□□□ 0.56
SMARCE1-209ENST00000478349 DUOX1Q9NRD9 1551 aa18.52■□□□□ 0.56
SMARCE1-209ENST00000478349 CTCFP49711 727 aaPredicted RBP18.52■□□□□ 0.56
SMARCE1-209ENST00000478349 GPSM2P81274 684 aa18.52■□□□□ 0.56
SMARCE1-209ENST00000478349 ANKRD18AQ8IVF6 992 aa18.52■□□□□ 0.56
SMARCE1-209ENST00000478349 PODXL2Q9NZ53 605 aa18.52■□□□□ 0.56
SMARCE1-209ENST00000478349 GGA1Q9UJY5 639 aa18.52■□□□□ 0.56
SMARCE1-209ENST00000478349 LTBP1Q14766 1721 aa18.52■□□□□ 0.55
SMARCE1-209ENST00000478349 UFL1O94874 794 aa18.51■□□□□ 0.55
SMARCE1-209ENST00000478349 TSR2Q969E8 191 aaKnown RBP18.51■□□□□ 0.55
SMARCE1-209ENST00000478349 BEGAINQ9BUH8 593 aa18.51■□□□□ 0.55
SMARCE1-209ENST00000478349 DBNDD1Q9H9R9 158 aa18.51■□□□□ 0.55
SMARCE1-209ENST00000478349 CNOT7Q9UIV1 285 aaKnown RBP18.51■□□□□ 0.55
SMARCE1-209ENST00000478349 WDR33Q9C0J8 1336 aaKnown RBP18.5■□□□□ 0.55
SMARCE1-209ENST00000478349 PI4KAP2A4QPH2 592 aa18.5■□□□□ 0.55
SMARCE1-209ENST00000478349 RIMBP2O15034 1052 aa18.5■□□□□ 0.55
SMARCE1-209ENST00000478349 ECE2O60344 883 aa18.5■□□□□ 0.55
SMARCE1-209ENST00000478349 CDC37L1Q7L3B6 337 aa18.5■□□□□ 0.55
SMARCE1-209ENST00000478349 MICALL2Q8IY33 904 aa18.5■□□□□ 0.55
SMARCE1-209ENST00000478349 PI4KAP1Q8N8J0 262 aa18.5■□□□□ 0.55
SMARCE1-209ENST00000478349 TBC1D16Q8TBP0 767 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms