RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 GRAPQ13588 217 aa15.33■□□□□ 0.04
CPSF7-211ENST00000477890 HDGFL1Q5TGJ6 251 aa15.33■□□□□ 0.04
CPSF7-211ENST00000477890 GRAPLQ8TC17 118 aaPredicted RBP15.33■□□□□ 0.04
CPSF7-211ENST00000477890 PRDM10Q9NQV6 1147 aa15.33■□□□□ 0.04
CPSF7-211ENST00000477890 WBP1LQ9NX94 342 aa15.33■□□□□ 0.04
CPSF7-211ENST00000477890 GPRC5DQ9NZD1 345 aa15.33■□□□□ 0.04
CPSF7-211ENST00000477890 WDR33Q9C0J8 1336 aaKnown RBP15.33■□□□□ 0.04
CPSF7-211ENST00000477890 DDX60Q8IY21 1712 aaKnown RBP15.32■□□□□ 0.04
CPSF7-211ENST00000477890 KIAA2012Q0VF49 1180 aa15.32■□□□□ 0.04
CPSF7-211ENST00000477890 ADARB2Q9NS39 739 aaKnown RBP15.32■□□□□ 0.04
CPSF7-211ENST00000477890 TRAF5O00463 557 aa15.31■□□□□ 0.04
CPSF7-211ENST00000477890 CIAPIN1Q6FI81 312 aa15.31■□□□□ 0.04
CPSF7-211ENST00000477890 ANKRD13DQ6ZTN6 518 aa15.31■□□□□ 0.04
CPSF7-211ENST00000477890 PAXIP1Q6ZW49 1069 aaPredicted RBP15.31■□□□□ 0.04
CPSF7-211ENST00000477890 PLBD2Q8NHP8 589 aa15.31■□□□□ 0.04
CPSF7-211ENST00000477890 ADAMTS8Q9UP79 889 aa15.31■□□□□ 0.04
CPSF7-211ENST00000477890 RAD17O75943 681 aa15.3■□□□□ 0.04
CPSF7-211ENST00000477890 HOXB7P09629 217 aa15.3■□□□□ 0.04
CPSF7-211ENST00000477890 GMPSP49915 693 aaPredicted RBP15.3■□□□□ 0.04
CPSF7-211ENST00000477890 LBX1P52954 281 aa15.3■□□□□ 0.04
CPSF7-211ENST00000477890 BCL2L13Q9BXK5 485 aa15.3■□□□□ 0.04
CPSF7-211ENST00000477890 DBF4Q9UBU7 674 aaPredicted RBP15.3■□□□□ 0.04
CPSF7-211ENST00000477890 LRRC37AA6NMS7 1700 aa15.29■□□□□ 0.04
CPSF7-211ENST00000477890 ATP5J2-PTCD1G3V325 749 aa15.29■□□□□ 0.04
CPSF7-211ENST00000477890 MAP2K1Q02750 393 aaPredicted RBP15.29■□□□□ 0.04
CPSF7-211ENST00000477890 GRM1Q13255 1194 aa15.29■□□□□ 0.04
CPSF7-211ENST00000477890 CST9Q5W186 159 aa15.29■□□□□ 0.04
CPSF7-211ENST00000477890 TMC4Q7Z404 712 aa15.29■□□□□ 0.04
CPSF7-211ENST00000477890 FAM89AQ96GI7 184 aa15.29■□□□□ 0.04
CPSF7-211ENST00000477890 CFAP44Q96MT7 982 aa15.29■□□□□ 0.04
CPSF7-211ENST00000477890 DUOX1Q9NRD9 1551 aa15.28■□□□□ 0.04
CPSF7-211ENST00000477890 ECE1P42892 770 aa15.28■□□□□ 0.04
CPSF7-211ENST00000477890 TNIP1Q15025 636 aa15.28■□□□□ 0.04
CPSF7-211ENST00000477890 DUSP27Q5VZP5 1158 aa15.28■□□□□ 0.04
CPSF7-211ENST00000477890 CYP4F22Q6NT55 531 aa15.28■□□□□ 0.04
CPSF7-211ENST00000477890 CAPNS2Q96L46 248 aa15.28■□□□□ 0.04
CPSF7-211ENST00000477890 ISCA1Q9BUE6 129 aa15.28■□□□□ 0.04
CPSF7-211ENST00000477890 HYPKQ9NX55 129 aa15.28■□□□□ 0.04
CPSF7-211ENST00000477890 CDHR2Q9BYE9 1310 aa15.27■□□□□ 0.04
CPSF7-211ENST00000477890 YDJCA8MPS7 323 aa15.27■□□□□ 0.04
CPSF7-211ENST00000477890 HSPA8P11142 646 aaKnown RBP15.27■□□□□ 0.04
CPSF7-211ENST00000477890 RTL5Q5HYW3 569 aaPredicted RBP15.27■□□□□ 0.04
CPSF7-211ENST00000477890 CELF1Q92879 486 aaKnown RBP15.27■□□□□ 0.04
CPSF7-211ENST00000477890 MBIPQ9NS73 344 aa15.27■□□□□ 0.04
CPSF7-211ENST00000477890 TLL2Q9Y6L7 1015 aa15.27■□□□□ 0.04
CPSF7-211ENST00000477890 THSD7BQ9C0I4 1608 aa15.27■□□□□ 0.03
CPSF7-211ENST00000477890 CELF2O95319 508 aaKnown RBP15.26■□□□□ 0.03
CPSF7-211ENST00000477890 SF3B3Q15393 1217 aaKnown RBP15.26■□□□□ 0.03
CPSF7-211ENST00000477890 WASHC4Q2M389 1173 aa15.26■□□□□ 0.03
CPSF7-211ENST00000477890 GLIS2Q9BZE0 524 aaPredicted RBP15.26■□□□□ 0.03
CPSF7-211ENST00000477890 NSFL1CQ9UNZ2 370 aaKnown RBP15.26■□□□□ 0.03
CPSF7-211ENST00000477890 SHTN1A0MZ66 631 aa15.25■□□□□ 0.03
CPSF7-211ENST00000477890 IRS4O14654 1257 aaPredicted RBP15.25■□□□□ 0.03
CPSF7-211ENST00000477890 HIRAP54198 1017 aaPredicted RBP15.25■□□□□ 0.03
CPSF7-211ENST00000477890 TRPM4Q8TD43 1214 aa15.25■□□□□ 0.03
CPSF7-211ENST00000477890 GPR101Q96P66 508 aaPredicted RBP15.25■□□□□ 0.03
CPSF7-211ENST00000477890 BEGAINQ9BUH8 593 aa15.25■□□□□ 0.03
CPSF7-211ENST00000477890 CNOT7Q9UIV1 285 aaKnown RBP15.25■□□□□ 0.03
CPSF7-211ENST00000477890 COL4A1P02462 1669 aa15.25■□□□□ 0.03
CPSF7-211ENST00000477890 C6orf229H3BNL8 230 aa15.24■□□□□ 0.03
CPSF7-211ENST00000477890 RIMBP2O15034 1052 aa15.24■□□□□ 0.03
CPSF7-211ENST00000477890 RIC3Q7Z5B4 369 aa15.24■□□□□ 0.03
CPSF7-211ENST00000477890 ZC3H15Q8WU90 426 aaKnown RBP15.24■□□□□ 0.03
CPSF7-211ENST00000477890 ZNF408Q9H9D4 720 aa15.24■□□□□ 0.03
CPSF7-211ENST00000477890 DBNDD1Q9H9R9 158 aa15.24■□□□□ 0.03
CPSF7-211ENST00000477890 PGAP2Q9UHJ9 254 aa15.24■□□□□ 0.03
CPSF7-211ENST00000477890 ZBTB12Q9Y330 459 aaPredicted RBP15.24■□□□□ 0.03
CPSF7-211ENST00000477890 H7C1D1 291 aa15.23■□□□□ 0.03
CPSF7-211ENST00000477890 PSMD14O00487 310 aa15.23■□□□□ 0.03
CPSF7-211ENST00000477890 ZNF853P0CG23 659 aa15.23■□□□□ 0.03
CPSF7-211ENST00000477890 GPSM2P81274 684 aa15.23■□□□□ 0.03
CPSF7-211ENST00000477890 GOLGA2Q08379 1002 aa15.23■□□□□ 0.03
CPSF7-211ENST00000477890 TRIM28Q13263 835 aaKnown RBP15.23■□□□□ 0.03
CPSF7-211ENST00000477890 SAPCD2Q86UD0 394 aa15.23■□□□□ 0.03
CPSF7-211ENST00000477890 MICALL2Q8IY33 904 aa15.23■□□□□ 0.03
CPSF7-211ENST00000477890 PHAXQ9H814 394 aaKnown RBP15.23■□□□□ 0.03
CPSF7-211ENST00000477890 PRKRIP1Q9H875 184 aaPredicted RBP15.23■□□□□ 0.03
CPSF7-211ENST00000477890 POLLQ9UGP5 575 aa15.23■□□□□ 0.03
CPSF7-211ENST00000477890 ELL2O00472 640 aaPredicted RBP15.22■□□□□ 0.03
CPSF7-211ENST00000477890 APAF1O14727 1248 aa15.22■□□□□ 0.03
CPSF7-211ENST00000477890 AOC2O75106 756 aa15.22■□□□□ 0.03
CPSF7-211ENST00000477890 RPS8P62241 208 aaKnown RBP15.22■□□□□ 0.03
CPSF7-211ENST00000477890 CDC37L1Q7L3B6 337 aa15.22■□□□□ 0.03
CPSF7-211ENST00000477890 EYA3Q99504 573 aa15.22■□□□□ 0.03
CPSF7-211ENST00000477890 IFT57Q9NWB7 429 aa15.22■□□□□ 0.03
CPSF7-211ENST00000477890 ECE2O60344 883 aa15.21■□□□□ 0.03
CPSF7-211ENST00000477890 MAP2K2P36507 400 aa15.21■□□□□ 0.03
CPSF7-211ENST00000477890 GNAI1P63096 354 aa15.21■□□□□ 0.03
CPSF7-211ENST00000477890 CALD1Q05682 793 aaKnown RBP15.21■□□□□ 0.03
CPSF7-211ENST00000477890 DOK7Q18PE1 504 aa15.21■□□□□ 0.03
CPSF7-211ENST00000477890 SAMD7Q7Z3H4 446 aa15.21■□□□□ 0.03
CPSF7-211ENST00000477890 ZBTB38Q8NAP3 1195 aaPredicted RBP15.21■□□□□ 0.03
CPSF7-211ENST00000477890 DPF2Q92785 391 aa15.21■□□□□ 0.03
CPSF7-211ENST00000477890 MYD88Q99836 296 aa15.21■□□□□ 0.03
CPSF7-211ENST00000477890 POLR2AP24928 1970 aaKnown RBP15.2■□□□□ 0.02
CPSF7-211ENST00000477890 HSP90B1P14625 803 aaKnown RBP15.2■□□□□ 0.02
CPSF7-211ENST00000477890 USP48Q86UV5 1035 aa15.2■□□□□ 0.02
CPSF7-211ENST00000477890 TBC1D16Q8TBP0 767 aa15.2■□□□□ 0.02
CPSF7-211ENST00000477890 SEC31BQ9NQW1 1179 aa15.2■□□□□ 0.02
CPSF7-211ENST00000477890 KCNQ5Q9NR82 932 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms