RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 CRISPLD2Q9H0B8 497 aa10.39□□□□□ -0.75
PTPRN-214ENST00000477819 GJA3Q9Y6H8 435 aa10.39□□□□□ -0.75
PTPRN-214ENST00000477819 SCN11AQ9UI33 1791 aa10.39□□□□□ -0.75
PTPRN-214ENST00000477819 FZD9O00144 591 aa10.38□□□□□ -0.75
PTPRN-214ENST00000477819 CA12O43570 354 aa10.38□□□□□ -0.75
PTPRN-214ENST00000477819 EPS15P42566 896 aa10.38□□□□□ -0.75
PTPRN-214ENST00000477819 GPC2Q8N158 579 aa10.38□□□□□ -0.75
PTPRN-214ENST00000477819 CNBD1Q8NA66 436 aa10.38□□□□□ -0.75
PTPRN-214ENST00000477819 SLC52A2Q9HAB3 445 aa10.38□□□□□ -0.75
PTPRN-214ENST00000477819 ZNF330Q9Y3S2 320 aaPredicted RBP10.38□□□□□ -0.75
PTPRN-214ENST00000477819 ARFGEF2Q9Y6D5 1785 aa10.38□□□□□ -0.75
PTPRN-214ENST00000477819 NPHP1O15259 732 aa10.37□□□□□ -0.75
PTPRN-214ENST00000477819 IARSP41252 1262 aaKnown RBP10.37□□□□□ -0.75
PTPRN-214ENST00000477819 PPP1R15BQ5SWA1 713 aa10.37□□□□□ -0.75
PTPRN-214ENST00000477819 SYNE4Q8N205 404 aa10.37□□□□□ -0.75
PTPRN-214ENST00000477819 CUL9Q8IWT3 2517 aa10.37□□□□□ -0.75
PTPRN-214ENST00000477819 A0A087WZG4 1122 aa10.36□□□□□ -0.75
PTPRN-214ENST00000477819 CELF2O95319 508 aaKnown RBP10.36□□□□□ -0.75
PTPRN-214ENST00000477819 BRPF1P55201 1214 aaPredicted RBP10.36□□□□□ -0.75
PTPRN-214ENST00000477819 ST5P78524 1137 aa10.36□□□□□ -0.75
PTPRN-214ENST00000477819 SAPCD2Q86UD0 394 aa10.36□□□□□ -0.75
PTPRN-214ENST00000477819 SETDB2Q96T68 719 aa10.36□□□□□ -0.75
PTPRN-214ENST00000477819 COL4A5P29400 1685 aa10.35□□□□□ -0.75
PTPRN-214ENST00000477819 SLC24A1O60721 1099 aa10.35□□□□□ -0.75
PTPRN-214ENST00000477819 LMOD1P29536 600 aaPredicted RBP10.35□□□□□ -0.75
PTPRN-214ENST00000477819 PBX2P40425 430 aa10.35□□□□□ -0.75
PTPRN-214ENST00000477819 SCNN1DP51172 638 aa10.35□□□□□ -0.75
PTPRN-214ENST00000477819 SULT6B1Q6IMI4 303 aa10.35□□□□□ -0.75
PTPRN-214ENST00000477819 SCN7AQ01118 1682 aa10.34□□□□□ -0.75
PTPRN-214ENST00000477819 RNMTO43148 476 aaKnown RBP10.34□□□□□ -0.75
PTPRN-214ENST00000477819 RTKN2Q8IZC4 609 aa10.34□□□□□ -0.75
PTPRN-214ENST00000477819 ZNF408Q9H9D4 720 aa10.34□□□□□ -0.75
PTPRN-214ENST00000477819 CEP290O15078 2479 aa10.34□□□□□ -0.75
PTPRN-214ENST00000477819 TBC1D12O60347 775 aa10.33□□□□□ -0.76
PTPRN-214ENST00000477819 CAMTA2O94983 1202 aa10.33□□□□□ -0.76
PTPRN-214ENST00000477819 STARD3NLO95772 234 aa10.33□□□□□ -0.76
PTPRN-214ENST00000477819 NPR1P16066 1061 aa10.33□□□□□ -0.76
PTPRN-214ENST00000477819 EIF6P56537 245 aaKnown RBP10.33□□□□□ -0.76
PTPRN-214ENST00000477819 AKAP4Q5JQC9 854 aa10.33□□□□□ -0.76
PTPRN-214ENST00000477819 SLC51AQ86UW1 340 aa10.33□□□□□ -0.76
PTPRN-214ENST00000477819 VSIG10Q8N0Z9 540 aa10.33□□□□□ -0.76
PTPRN-214ENST00000477819 JDP2Q8WYK2 163 aa10.33□□□□□ -0.76
PTPRN-214ENST00000477819 GLIS2Q9BZE0 524 aaPredicted RBP10.33□□□□□ -0.76
PTPRN-214ENST00000477819 A1BGP04217 495 aa10.32□□□□□ -0.76
PTPRN-214ENST00000477819 DLK2Q6UY11 383 aa10.32□□□□□ -0.76
PTPRN-214ENST00000477819 USP50Q70EL3 339 aaPredicted RBP10.32□□□□□ -0.76
PTPRN-214ENST00000477819 NBPF5PQ86XG9 351 aaPredicted RBP10.32□□□□□ -0.76
PTPRN-214ENST00000477819 OXER1Q8TDS5 423 aa10.32□□□□□ -0.76
PTPRN-214ENST00000477819 MRC1P22897 1456 aa10.31□□□□□ -0.76
PTPRN-214ENST00000477819 FAM177BA6PVY3 158 aa10.31□□□□□ -0.76
PTPRN-214ENST00000477819 PDE4AP27815 886 aa10.31□□□□□ -0.76
PTPRN-214ENST00000477819 HABP4Q5JVS0 413 aaKnown RBP10.31□□□□□ -0.76
PTPRN-214ENST00000477819 TRIOBPQ9H2D6 2365 aa10.3□□□□□ -0.76
PTPRN-214ENST00000477819 UBR2Q8IWV8 1755 aa10.3□□□□□ -0.76
PTPRN-214ENST00000477819 KLRG2A4D1S0 409 aaPredicted RBP10.3□□□□□ -0.76
PTPRN-214ENST00000477819 TRPA1O75762 1119 aa10.3□□□□□ -0.76
PTPRN-214ENST00000477819 PIP4K2AP48426 406 aaPredicted RBP10.3□□□□□ -0.76
PTPRN-214ENST00000477819 CDCA8Q53HL2 280 aa10.3□□□□□ -0.76
PTPRN-214ENST00000477819 ZNF496Q96IT1 587 aaPredicted RBP10.3□□□□□ -0.76
PTPRN-214ENST00000477819 HHIPL1Q96JK4 782 aa10.3□□□□□ -0.76
PTPRN-214ENST00000477819 LARP6Q9BRS8 491 aaKnown RBP10.3□□□□□ -0.76
PTPRN-214ENST00000477819 BCORQ6W2J9 1755 aa10.29□□□□□ -0.76
PTPRN-214ENST00000477819 A0A0C4DFX4 3053 aa10.29□□□□□ -0.76
PTPRN-214ENST00000477819 ARHGAP33O14559 1287 aa10.29□□□□□ -0.76
PTPRN-214ENST00000477819 IL6STP40189 918 aaPredicted RBP10.29□□□□□ -0.76
PTPRN-214ENST00000477819 PSEN2P49810 448 aa10.29□□□□□ -0.76
PTPRN-214ENST00000477819 NOGQ13253 232 aa10.29□□□□□ -0.76
PTPRN-214ENST00000477819 PPP4R3BQ5MIZ7 849 aa10.29□□□□□ -0.76
PTPRN-214ENST00000477819 LARGE2Q8N3Y3 721 aa10.29□□□□□ -0.76
PTPRN-214ENST00000477819 PSMD1Q99460 953 aa10.29□□□□□ -0.76
PTPRN-214ENST00000477819 HPS5Q9UPZ3 1129 aa10.29□□□□□ -0.76
PTPRN-214ENST00000477819 SNED1Q8TER0 1413 aa10.29□□□□□ -0.76
PTPRN-214ENST00000477819 MKI67P46013 3256 aaKnown RBP10.29□□□□□ -0.76
PTPRN-214ENST00000477819 IL13P35225 146 aa10.28□□□□□ -0.76
PTPRN-214ENST00000477819 HUNKP57058 714 aa10.28□□□□□ -0.76
PTPRN-214ENST00000477819 KIF23Q02241 960 aaPredicted RBP10.28□□□□□ -0.76
PTPRN-214ENST00000477819 CTU1Q7Z7A3 348 aaKnown RBP10.28□□□□□ -0.76
PTPRN-214ENST00000477819 DZIP3Q86Y13 1208 aaKnown RBP10.28□□□□□ -0.76
PTPRN-214ENST00000477819 TTC5Q8N0Z6 440 aa10.28□□□□□ -0.76
PTPRN-214ENST00000477819 NBPF15Q8N660 670 aa10.28□□□□□ -0.76
PTPRN-214ENST00000477819 DDX27Q96GQ7 796 aaKnown RBP10.28□□□□□ -0.76
PTPRN-214ENST00000477819 ADARB2Q9NS39 739 aaKnown RBP10.28□□□□□ -0.76
PTPRN-214ENST00000477819 RNF186Q9NXI6 227 aa10.28□□□□□ -0.76
PTPRN-214ENST00000477819 GPRC5DQ9NZD1 345 aa10.28□□□□□ -0.76
PTPRN-214ENST00000477819 SZT2Q5T011 3432 aa10.28□□□□□ -0.76
PTPRN-214ENST00000477819 FAM155AB1AL88 458 aaPredicted RBP10.27□□□□□ -0.77
PTPRN-214ENST00000477819 TCERG1O14776 1098 aaKnown RBP10.27□□□□□ -0.77
PTPRN-214ENST00000477819 HIRAP54198 1017 aaPredicted RBP10.27□□□□□ -0.77
PTPRN-214ENST00000477819 MTHFSDQ2M296 383 aaKnown RBP10.27□□□□□ -0.77
PTPRN-214ENST00000477819 DMRTA1Q5VZB9 504 aa10.27□□□□□ -0.77
PTPRN-214ENST00000477819 GCC1Q96CN9 775 aa10.27□□□□□ -0.77
PTPRN-214ENST00000477819 POLR3GLQ9BT43 218 aa10.27□□□□□ -0.77
PTPRN-214ENST00000477819 HEG1Q9ULI3 1381 aa10.26□□□□□ -0.77
PTPRN-214ENST00000477819 SHTN1A0MZ66 631 aa10.26□□□□□ -0.77
PTPRN-214ENST00000477819 HMOX1P09601 288 aa10.26□□□□□ -0.77
PTPRN-214ENST00000477819 ALDH1B1P30837 517 aa10.26□□□□□ -0.77
PTPRN-214ENST00000477819 GMPSP49915 693 aaPredicted RBP10.26□□□□□ -0.77
PTPRN-214ENST00000477819 ADGRD1Q6QNK2 874 aa10.26□□□□□ -0.77
PTPRN-214ENST00000477819 TPTE2Q6XPS3 522 aa10.26□□□□□ -0.77
PTPRN-214ENST00000477819 NPM2Q86SE8 214 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms