RNA–Protein interactions for RNA: ENST00000477440.6

ARHGEF3-208, Transcript of Rho guanine nucleotide exchange factor 3, human

TSL 3

Gene ARHGEF3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF3-208	ENST00000477440	GRAPL	Q8TC17	118 aa	Predicted RBP	32.29	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	PDE8A	O60658	829 aa		32.28	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	HSP90B1	P14625	803 aa	Known RBP	32.28	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	UBE3B	Q7Z3V4	1068 aa		32.28	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	RTKN2	Q8IZC4	609 aa		32.28	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	SMC4	Q9NTJ3	1288 aa		32.28	■■■□□ 2.76
ARHGEF3-208	ENST00000477440		H7C1W4	665 aa		32.27	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.27	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	ZBED9	Q6R2W3	1325 aa		32.26	■■■□□ 2.76
ARHGEF3-208	ENST00000477440	CC2D2B	Q6DHV5	1058 aa		32.26	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	ATP6V0A2	Q9Y487	856 aa		32.26	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	SLC4A10	Q6U841	1118 aa		32.25	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	CELF1	Q92879	486 aa	Known RBP	32.25	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	PTPRC	P08575	1304 aa		32.25	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	BBOX1	O75936	387 aa		32.24	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	CASP7	P55210	303 aa		32.24	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.24	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.23	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	SEC31B	Q9NQW1	1179 aa		32.23	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.23	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	SPEF2	Q9C093	1822 aa		32.23	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.23	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	CTSW	P56202	376 aa		32.22	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	CCDC152	Q4G0S7	254 aa		32.22	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	PSMD1	Q99460	953 aa		32.22	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	RARS	P54136	660 aa	Known RBP	32.2	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	SP8	Q8IXZ3	490 aa		32.2	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	SRCIN1	Q9C0H9	1055 aa		32.2	■■■□□ 2.75
ARHGEF3-208	ENST00000477440	TMX4	Q9H1E5	349 aa	Predicted RBP	32.19	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	GRIPAP1	Q4V328	841 aa		32.18	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	TMC4	Q7Z404	712 aa		32.18	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	TTLL11	Q8NHH1	800 aa		32.18	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	PLA2G12B	Q9BX93	195 aa		32.18	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	DUOX1	Q9NRD9	1551 aa		32.18	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	COL4A5	P29400	1685 aa		32.18	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	ALDH1L1	O75891	902 aa		32.17	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	IARS	P41252	1262 aa	Known RBP	32.17	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	LTBP1	Q14766	1721 aa		32.17	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	RPS8	P62241	208 aa	Known RBP	32.16	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	GRM8	O00222	908 aa		32.15	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	BRPF1	P55201	1214 aa	Predicted RBP	32.15	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	GREM2	Q9H772	168 aa		32.15	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	NOB1	Q9ULX3	412 aa	Known RBP	32.15	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	RTL9	Q8NET4	1388 aa		32.14	■■■□□ 2.74
ARHGEF3-208	ENST00000477440	DPP8	Q6V1X1	898 aa	Predicted RBP	32.13	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	MPND	Q8N594	471 aa		32.13	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	NMRK2	Q9NPI5	230 aa		32.13	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.13	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	KDM2B	Q8NHM5	1336 aa		32.12	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	GLTPD2	A6NH11	291 aa		32.11	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.11	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	FAM161A	Q3B820	660 aa		32.1	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	KIF16B	Q96L93	1317 aa		32.09	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	CSF1R	P07333	972 aa		32.09	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	FOXO4	P98177	505 aa		32.09	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	ANKRD18A	Q8IVF6	992 aa		32.09	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	CDC5L	Q99459	802 aa	Known RBP	32.09	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	KIF3C	O14782	793 aa		32.08	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	EPHA10	Q5JZY3	1008 aa		32.08	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	WDR90	Q96KV7	1748 aa		32.08	■■■□□ 2.73
ARHGEF3-208	ENST00000477440	PPIP5K2	O43314	1243 aa		32.07	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	BCAR3	O75815	825 aa		32.07	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	NBPF7	P0C2Y1	421 aa	Predicted RBP	32.07	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	GPSM2	P81274	684 aa		32.07	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	AOC3	Q16853	763 aa		32.07	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	LARGE2	Q8N3Y3	721 aa		32.07	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	SUPT20H	Q8NEM7	779 aa		32.07	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.07	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	UTY	O14607	1347 aa		32.06	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	ZNF541	Q9H0D2	1346 aa		32.06	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	ITGA6	P23229	1130 aa		32.06	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	API5	Q9BZZ5	524 aa	Known RBP	32.06	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	DPY19L2	Q6NUT2	758 aa		32.05	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	JDP2	Q8WYK2	163 aa		32.05	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	SUCLG2	Q96I99	432 aa		32.05	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	FZD9	O00144	591 aa		32.04	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	RRAGC	Q9HB90	399 aa		32.04	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	LMBR1L	Q6UX01	489 aa		32.03	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	KAZALD1	Q96I82	304 aa		32.03	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	DDN	O94850	711 aa	Predicted RBP	32.02	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	VPS33B	Q9H267	617 aa		32.02	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	POLL	Q9UGP5	575 aa		32.02	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	CHMP3	Q9Y3E7	222 aa		32.02	■■■□□ 2.72
ARHGEF3-208	ENST00000477440		A0A1B0GUL6	1792 aa		32.02	■■■□□ 2.72
ARHGEF3-208	ENST00000477440	CCT4	P50991	539 aa	Known RBP	32.01	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	KIAA2012	Q0VF49	1180 aa		32.01	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	ARHGAP45	Q92619	1136 aa		32.01	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	USP44	Q9H0E7	712 aa		32.01	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	BSDC1	Q9NW68	430 aa	Predicted RBP	32.01	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	NIM1K	Q8IY84	436 aa		32	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	GPR101	Q96P66	508 aa	Predicted RBP	32	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	PODXL2	Q9NZ53	605 aa		32	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	ANKRD18B	A2A2Z9	1011 aa		31.99	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	C6orf229	H3BNL8	230 aa		31.99	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	IGHMBP2	P38935	993 aa	Known RBP	31.99	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	TBC1D16	Q8TBP0	767 aa		31.99	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	FRAT1	Q92837	279 aa	Predicted RBP	31.99	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	ANKIB1	Q9P2G1	1089 aa		31.99	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	TNN	Q9UQP3	1299 aa		31.98	■■■□□ 2.71
ARHGEF3-208	ENST00000477440	POTEC	B2RU33	542 aa		31.97	■■■□□ 2.71

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