RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 SYNE4Q8N205 404 aa15.7■□□□□ 0.1
CLCNKA-205ENST00000477360 RNF181Q9P0P0 153 aa15.7■□□□□ 0.1
CLCNKA-205ENST00000477360 DDX60Q8IY21 1712 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-205ENST00000477360 CWF19L2Q2TBE0 894 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-205ENST00000477360 SUPT20HQ8NEM7 779 aa15.69■□□□□ 0.1
CLCNKA-205ENST00000477360 RTFDC1Q9BY42 306 aaPredicted RBP15.69■□□□□ 0.1
CLCNKA-205ENST00000477360 KDM2BQ8NHM5 1336 aa15.68■□□□□ 0.1
CLCNKA-205ENST00000477360 CASP7P55210 303 aa15.68■□□□□ 0.1
CLCNKA-205ENST00000477360 ARHGAP45Q92619 1136 aa15.68■□□□□ 0.1
CLCNKA-205ENST00000477360 SRCIN1Q9C0H9 1055 aa15.68■□□□□ 0.1
CLCNKA-205ENST00000477360 SBF1O95248 1867 aa15.67■□□□□ 0.1
CLCNKA-205ENST00000477360 CTSWP56202 376 aa15.67■□□□□ 0.1
CLCNKA-205ENST00000477360 RPS8P62241 208 aaKnown RBP15.67■□□□□ 0.1
CLCNKA-205ENST00000477360 RASSF7Q02833 373 aa15.67■□□□□ 0.1
CLCNKA-205ENST00000477360 SMC4Q9NTJ3 1288 aa15.67■□□□□ 0.1
CLCNKA-205ENST00000477360 KIF16BQ96L93 1317 aa15.67■□□□□ 0.1
CLCNKA-205ENST00000477360 CSF1RP07333 972 aa15.66■□□□□ 0.1
CLCNKA-205ENST00000477360 PRELPP51888 382 aa15.66■□□□□ 0.1
CLCNKA-205ENST00000477360 RARSP54136 660 aaKnown RBP15.66■□□□□ 0.1
CLCNKA-205ENST00000477360 UBE3BQ7Z3V4 1068 aa15.66■□□□□ 0.1
CLCNKA-205ENST00000477360 TTLL11Q8NHH1 800 aa15.66■□□□□ 0.1
CLCNKA-205ENST00000477360 CDC5LQ99459 802 aaKnown RBP15.66■□□□□ 0.1
CLCNKA-205ENST00000477360 GPBP1L1Q9HC44 474 aaPredicted RBP15.66■□□□□ 0.1
CLCNKA-205ENST00000477360 UTYO14607 1347 aa15.66■□□□□ 0.1
CLCNKA-205ENST00000477360 F6X3S4 739 aa15.65■□□□□ 0.1
CLCNKA-205ENST00000477360 GRM8O00222 908 aa15.65■□□□□ 0.1
CLCNKA-205ENST00000477360 IARSP41252 1262 aaKnown RBP15.65■□□□□ 0.1
CLCNKA-205ENST00000477360 DPY19L2Q6NUT2 758 aa15.65■□□□□ 0.1
CLCNKA-205ENST00000477360 API5Q9BZZ5 524 aaKnown RBP15.65■□□□□ 0.1
CLCNKA-205ENST00000477360 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
CLCNKA-205ENST00000477360 GLTPD2A6NH11 291 aa15.64■□□□□ 0.09
CLCNKA-205ENST00000477360 RTL5Q5HYW3 569 aaPredicted RBP15.64■□□□□ 0.09
CLCNKA-205ENST00000477360 MPNDQ8N594 471 aa15.64■□□□□ 0.09
CLCNKA-205ENST00000477360 PODXL2Q9NZ53 605 aa15.64■□□□□ 0.09
CLCNKA-205ENST00000477360 LRRC37AA6NMS7 1700 aa15.63■□□□□ 0.09
CLCNKA-205ENST00000477360 IPO8O15397 1037 aaKnown RBP15.63■□□□□ 0.09
CLCNKA-205ENST00000477360 CCT4P50991 539 aaKnown RBP15.63■□□□□ 0.09
CLCNKA-205ENST00000477360 DPP8Q6V1X1 898 aaPredicted RBP15.63■□□□□ 0.09
CLCNKA-205ENST00000477360 CELF1Q92879 486 aaKnown RBP15.63■□□□□ 0.09
CLCNKA-205ENST00000477360 C9orf78Q9NZ63 289 aaPredicted RBP15.63■□□□□ 0.09
CLCNKA-205ENST00000477360 HDAC5Q9UQL6 1122 aa15.63■□□□□ 0.09
CLCNKA-205ENST00000477360 DICER1Q9UPY3 1922 aaKnown RBP15.62■□□□□ 0.09
CLCNKA-205ENST00000477360 FZD9O00144 591 aa15.62■□□□□ 0.09
CLCNKA-205ENST00000477360 ANKRD18AQ8IVF6 992 aa15.62■□□□□ 0.09
CLCNKA-205ENST00000477360 JDP2Q8WYK2 163 aa15.62■□□□□ 0.09
CLCNKA-205ENST00000477360 BSDC1Q9NW68 430 aaPredicted RBP15.62■□□□□ 0.09
CLCNKA-205ENST00000477360 SLC4A10Q6U841 1118 aa15.61■□□□□ 0.09
CLCNKA-205ENST00000477360 OLFM4Q6UX06 510 aa15.61■□□□□ 0.09
CLCNKA-205ENST00000477360 ZNF277Q9NRM2 450 aaPredicted RBP15.61■□□□□ 0.09
CLCNKA-205ENST00000477360 CACNA1SQ13698 1873 aa15.61■□□□□ 0.09
CLCNKA-205ENST00000477360 KIAA2012Q0VF49 1180 aa15.6■□□□□ 0.09
CLCNKA-205ENST00000477360 L3MBTL3Q96JM7 780 aaPredicted RBP15.6■□□□□ 0.09
CLCNKA-205ENST00000477360 FOXO4P98177 505 aa15.59■□□□□ 0.09
CLCNKA-205ENST00000477360 EYA3Q99504 573 aa15.59■□□□□ 0.09
CLCNKA-205ENST00000477360 BCL2L13Q9BXK5 485 aa15.59■□□□□ 0.09
CLCNKA-205ENST00000477360 GREM2Q9H772 168 aa15.59■□□□□ 0.09
CLCNKA-205ENST00000477360 SEC31BQ9NQW1 1179 aa15.59■□□□□ 0.09
CLCNKA-205ENST00000477360 NOB1Q9ULX3 412 aaKnown RBP15.59■□□□□ 0.09
CLCNKA-205ENST00000477360 MYH3P11055 1940 aa15.58■□□□□ 0.09
CLCNKA-205ENST00000477360 TIAM2Q8IVF5 1701 aa15.58■□□□□ 0.08
CLCNKA-205ENST00000477360 ANKRD18BA2A2Z9 1011 aa15.58■□□□□ 0.08
CLCNKA-205ENST00000477360 KIF3CO14782 793 aa15.58■□□□□ 0.08
CLCNKA-205ENST00000477360 VEGFAP15692 232 aaPredicted RBP15.58■□□□□ 0.08
CLCNKA-205ENST00000477360 IGHMBP2P38935 993 aaKnown RBP15.58■□□□□ 0.08
CLCNKA-205ENST00000477360 IFIT5Q13325 482 aaKnown RBP15.58■□□□□ 0.08
CLCNKA-205ENST00000477360 RABL6Q3YEC7 729 aaPredicted RBP15.58■□□□□ 0.08
CLCNKA-205ENST00000477360 GPC2Q8N158 579 aa15.58■□□□□ 0.08
CLCNKA-205ENST00000477360 LARGE2Q8N3Y3 721 aa15.58■□□□□ 0.08
CLCNKA-205ENST00000477360 JARID2Q92833 1246 aaPredicted RBP15.58■□□□□ 0.08
CLCNKA-205ENST00000477360 XDHP47989 1333 aa15.58■□□□□ 0.08
CLCNKA-205ENST00000477360 IQCA1LA6NCM1 817 aa15.57■□□□□ 0.08
CLCNKA-205ENST00000477360 PPIP5K2O43314 1243 aa15.57■□□□□ 0.08
CLCNKA-205ENST00000477360 TOMM70O94826 608 aa15.57■□□□□ 0.08
CLCNKA-205ENST00000477360 ITGA6P23229 1130 aa15.57■□□□□ 0.08
CLCNKA-205ENST00000477360 EIF6P56537 245 aaKnown RBP15.57■□□□□ 0.08
CLCNKA-205ENST00000477360 INTS3Q68E01 1043 aaKnown RBP15.57■□□□□ 0.08
CLCNKA-205ENST00000477360 NIM1KQ8IY84 436 aa15.57■□□□□ 0.08
CLCNKA-205ENST00000477360 ANKRD2Q9GZV1 360 aa15.57■□□□□ 0.08
CLCNKA-205ENST00000477360 USP44Q9H0E7 712 aa15.57■□□□□ 0.08
CLCNKA-205ENST00000477360 ZNRF3Q9ULT6 936 aa15.57■□□□□ 0.08
CLCNKA-205ENST00000477360 NSFL1CQ9UNZ2 370 aaKnown RBP15.57■□□□□ 0.08
CLCNKA-205ENST00000477360 WDR90Q96KV7 1748 aa15.57■□□□□ 0.08
CLCNKA-205ENST00000477360 NBPF7P0C2Y1 421 aaPredicted RBP15.56■□□□□ 0.08
CLCNKA-205ENST00000477360 GPSM2P81274 684 aa15.56■□□□□ 0.08
CLCNKA-205ENST00000477360 WASHC4Q2M389 1173 aa15.56■□□□□ 0.08
CLCNKA-205ENST00000477360 CCDC57Q2TAC2 916 aa15.56■□□□□ 0.08
CLCNKA-205ENST00000477360 ATF7IPQ6VMQ6 1270 aa15.56■□□□□ 0.08
CLCNKA-205ENST00000477360 TBC1D16Q8TBP0 767 aa15.56■□□□□ 0.08
CLCNKA-205ENST00000477360 DUOX1Q9NRD9 1551 aa15.56■□□□□ 0.08
CLCNKA-205ENST00000477360 LTBP1Q14766 1721 aa15.56■□□□□ 0.08
CLCNKA-205ENST00000477360 ATP2B4P23634 1241 aa15.55■□□□□ 0.08
CLCNKA-205ENST00000477360 C1QTNF8P60827 252 aa15.55■□□□□ 0.08
CLCNKA-205ENST00000477360 FAM161AQ3B820 660 aa15.55■□□□□ 0.08
CLCNKA-205ENST00000477360 LMBR1LQ6UX01 489 aa15.55■□□□□ 0.08
CLCNKA-205ENST00000477360 RBM46Q8TBY0 533 aaKnown RBP15.55■□□□□ 0.08
CLCNKA-205ENST00000477360 MPHOSPH8Q99549 860 aa15.55■□□□□ 0.08
CLCNKA-205ENST00000477360 GGA1Q9UJY5 639 aa15.55■□□□□ 0.08
CLCNKA-205ENST00000477360 MINPP1Q9UNW1 487 aa15.55■□□□□ 0.08
CLCNKA-205ENST00000477360 LEMD3Q9Y2U8 911 aa15.55■□□□□ 0.08
CLCNKA-205ENST00000477360 CCDC88AQ3V6T2 1871 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms