RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 CHMP4AQ9BY43 222 aa15.88■□□□□ 0.13
APTX-220ENST00000476858 SEC31BQ9NQW1 1179 aa15.88■□□□□ 0.13
APTX-220ENST00000476858 ZBTB12Q9Y330 459 aaPredicted RBP15.88■□□□□ 0.13
APTX-220ENST00000476858 RNF123Q5XPI4 1314 aa15.88■□□□□ 0.13
APTX-220ENST00000476858 ZBED9Q6R2W3 1325 aa15.88■□□□□ 0.13
APTX-220ENST00000476858 H7C1W4 665 aa15.87■□□□□ 0.13
APTX-220ENST00000476858 UBE3BQ7Z3V4 1068 aa15.87■□□□□ 0.13
APTX-220ENST00000476858 CELF1Q92879 486 aaKnown RBP15.87■□□□□ 0.13
APTX-220ENST00000476858 CRAMP1Q96RY5 1269 aa15.87■□□□□ 0.13
APTX-220ENST00000476858 SMC4Q9NTJ3 1288 aa15.87■□□□□ 0.13
APTX-220ENST00000476858 COL4A5P29400 1685 aa15.86■□□□□ 0.13
APTX-220ENST00000476858 BCAR3O75815 825 aa15.86■□□□□ 0.13
APTX-220ENST00000476858 SF3B3Q15393 1217 aaKnown RBP15.86■□□□□ 0.13
APTX-220ENST00000476858 SLC4A10Q6U841 1118 aa15.86■□□□□ 0.13
APTX-220ENST00000476858 LINS1Q8NG48 757 aa15.86■□□□□ 0.13
APTX-220ENST00000476858 ZNF526Q8TF50 670 aaPredicted RBP15.86■□□□□ 0.13
APTX-220ENST00000476858 RBM17Q96I25 401 aaKnown RBP15.86■□□□□ 0.13
APTX-220ENST00000476858 RNF181Q9P0P0 153 aa15.86■□□□□ 0.13
APTX-220ENST00000476858 CCDC88AQ3V6T2 1871 aa15.85■□□□□ 0.13
APTX-220ENST00000476858 PPEF1O14829 653 aaPredicted RBP15.85■□□□□ 0.13
APTX-220ENST00000476858 NEXNQ0ZGT2 675 aa15.85■□□□□ 0.13
APTX-220ENST00000476858 EPHA10Q5JZY3 1008 aa15.85■□□□□ 0.13
APTX-220ENST00000476858 NOB1Q9ULX3 412 aaKnown RBP15.85■□□□□ 0.13
APTX-220ENST00000476858 ZBTB22O15209 634 aa15.84■□□□□ 0.13
APTX-220ENST00000476858 ALDH1B1P30837 517 aa15.84■□□□□ 0.13
APTX-220ENST00000476858 ALDH1L2Q3SY69 923 aa15.84■□□□□ 0.13
APTX-220ENST00000476858 ZNF277Q9NRM2 450 aaPredicted RBP15.84■□□□□ 0.13
APTX-220ENST00000476858 CDHR2Q9BYE9 1310 aa15.84■□□□□ 0.13
APTX-220ENST00000476858 GRAPQ13588 217 aa15.83■□□□□ 0.12
APTX-220ENST00000476858 CCDC93Q567U6 631 aa15.83■□□□□ 0.12
APTX-220ENST00000476858 GRAPLQ8TC17 118 aaPredicted RBP15.83■□□□□ 0.12
APTX-220ENST00000476858 DUOX1Q9NRD9 1551 aa15.83■□□□□ 0.12
APTX-220ENST00000476858 TIAM2Q8IVF5 1701 aa15.82■□□□□ 0.12
APTX-220ENST00000476858 WTIPA6NIX2 430 aaPredicted RBP15.82■□□□□ 0.12
APTX-220ENST00000476858 PDE8AO60658 829 aa15.82■□□□□ 0.12
APTX-220ENST00000476858 CTSWP56202 376 aa15.82■□□□□ 0.12
APTX-220ENST00000476858 DDX46Q7L014 1031 aaKnown RBP15.82■□□□□ 0.12
APTX-220ENST00000476858 TTLL11Q8NHH1 800 aa15.82■□□□□ 0.12
APTX-220ENST00000476858 KAZALD1Q96I82 304 aa15.82■□□□□ 0.12
APTX-220ENST00000476858 GREM2Q9H772 168 aa15.82■□□□□ 0.12
APTX-220ENST00000476858 LRRC37AA6NMS7 1700 aa15.81■□□□□ 0.12
APTX-220ENST00000476858 NBPF7P0C2Y1 421 aaPredicted RBP15.81■□□□□ 0.12
APTX-220ENST00000476858 LMNB1P20700 586 aa15.81■□□□□ 0.12
APTX-220ENST00000476858 FOXO4P98177 505 aa15.81■□□□□ 0.12
APTX-220ENST00000476858 TAOK3Q9H2K8 898 aa15.81■□□□□ 0.12
APTX-220ENST00000476858 ATP6V0A2Q9Y487 856 aa15.81■□□□□ 0.12
APTX-220ENST00000476858 PTPRCP08575 1304 aa15.8■□□□□ 0.12
APTX-220ENST00000476858 LTBP3Q9NS15 1303 aa15.8■□□□□ 0.12
APTX-220ENST00000476858 CT47B1P0C2W7 299 aaPredicted RBP15.8■□□□□ 0.12
APTX-220ENST00000476858 FKBP4Q02790 459 aaKnown RBP eCLIP15.8■□□□□ 0.12
APTX-220ENST00000476858 REM2Q8IYK8 340 aaPredicted RBP15.8■□□□□ 0.12
APTX-220ENST00000476858 SUCLG2Q96I99 432 aa15.8■□□□□ 0.12
APTX-220ENST00000476858 GPR101Q96P66 508 aaPredicted RBP15.8■□□□□ 0.12
APTX-220ENST00000476858 SRCIN1Q9C0H9 1055 aa15.8■□□□□ 0.12
APTX-220ENST00000476858 SPEF2Q9C093 1822 aa15.8■□□□□ 0.12
APTX-220ENST00000476858 GRM8O00222 908 aa15.79■□□□□ 0.12
APTX-220ENST00000476858 FAM161AQ3B820 660 aa15.79■□□□□ 0.12
APTX-220ENST00000476858 LTBP1Q14766 1721 aa15.79■□□□□ 0.12
APTX-220ENST00000476858 ALDH1L1O75891 902 aa15.78■□□□□ 0.12
APTX-220ENST00000476858 BRPF1P55201 1214 aaPredicted RBP15.78■□□□□ 0.12
APTX-220ENST00000476858 GPSM2P81274 684 aa15.78■□□□□ 0.12
APTX-220ENST00000476858 SP8Q8IXZ3 490 aa15.78■□□□□ 0.12
APTX-220ENST00000476858 PLA2G12BQ9BX93 195 aa15.78■□□□□ 0.12
APTX-220ENST00000476858 NMRK2Q9NPI5 230 aa15.78■□□□□ 0.12
APTX-220ENST00000476858 MYH3P11055 1940 aa15.78■□□□□ 0.12
APTX-220ENST00000476858 DICER1Q9UPY3 1922 aaKnown RBP15.77■□□□□ 0.12
APTX-220ENST00000476858 BBOX1O75936 387 aa15.77■□□□□ 0.12
APTX-220ENST00000476858 CSF1RP07333 972 aa15.77■□□□□ 0.12
APTX-220ENST00000476858 RPS8P62241 208 aaKnown RBP15.77■□□□□ 0.12
APTX-220ENST00000476858 CCDC152Q4G0S7 254 aa15.77■□□□□ 0.12
APTX-220ENST00000476858 YTHDC1Q96MU7 727 aaKnown RBP15.77■□□□□ 0.12
APTX-220ENST00000476858 USP44Q9H0E7 712 aa15.77■□□□□ 0.12
APTX-220ENST00000476858 UTYO14607 1347 aa15.76■□□□□ 0.11
APTX-220ENST00000476858 ZNF541Q9H0D2 1346 aa15.76■□□□□ 0.11
APTX-220ENST00000476858 TRIM27P14373 513 aa15.76■□□□□ 0.11
APTX-220ENST00000476858 SOGA3Q5TF21 947 aa15.76■□□□□ 0.11
APTX-220ENST00000476858 RTKN2Q8IZC4 609 aa15.76■□□□□ 0.11
APTX-220ENST00000476858 FRAT1Q92837 279 aaPredicted RBP15.76■□□□□ 0.11
APTX-220ENST00000476858 ZNF594Q96JF6 807 aaPredicted RBP15.76■□□□□ 0.11
APTX-220ENST00000476858 PSMD1Q99460 953 aa15.76■□□□□ 0.11
APTX-220ENST00000476858 C9orf78Q9NZ63 289 aaPredicted RBP15.76■□□□□ 0.11
APTX-220ENST00000476858 IARSP41252 1262 aaKnown RBP15.75■□□□□ 0.11
APTX-220ENST00000476858 AOC3Q16853 763 aa15.75■□□□□ 0.11
APTX-220ENST00000476858 LMBR1LQ6UX01 489 aa15.75■□□□□ 0.11
APTX-220ENST00000476858 ANKRD44Q8N8A2 993 aa15.75■□□□□ 0.11
APTX-220ENST00000476858 CLUAP1Q96AJ1 413 aa15.75■□□□□ 0.11
APTX-220ENST00000476858 POLLQ9UGP5 575 aa15.75■□□□□ 0.11
APTX-220ENST00000476858 ITGA6P23229 1130 aa15.74■□□□□ 0.11
APTX-220ENST00000476858 MPNDQ8N594 471 aa15.74■□□□□ 0.11
APTX-220ENST00000476858 RTFDC1Q9BY42 306 aaPredicted RBP15.74■□□□□ 0.11
APTX-220ENST00000476858 BICC1Q9H694 974 aaKnown RBP15.74■□□□□ 0.11
APTX-220ENST00000476858 RTL9Q8NET4 1388 aa15.74■□□□□ 0.11
APTX-220ENST00000476858 POTECB2RU33 542 aa15.73■□□□□ 0.11
APTX-220ENST00000476858 SNAP23O00161 211 aa15.73■□□□□ 0.11
APTX-220ENST00000476858 KIF3CO14782 793 aa15.73■□□□□ 0.11
APTX-220ENST00000476858 DDNO94850 711 aaPredicted RBP15.73■□□□□ 0.11
APTX-220ENST00000476858 RLBP1P12271 317 aa15.73■□□□□ 0.11
APTX-220ENST00000476858 CC2D2BQ6DHV5 1058 aa15.73■□□□□ 0.11
APTX-220ENST00000476858 DPP8Q6V1X1 898 aaPredicted RBP15.73■□□□□ 0.11
APTX-220ENST00000476858 MEIS3Q99687 375 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms