RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 VPS53Q5VIR6 699 aa19.75■□□□□ 0.75
TMEM53-208ENST00000476724 RRAGDQ9NQL2 400 aaPredicted RBP19.75■□□□□ 0.75
TMEM53-208ENST00000476724 ZKSCAN1P17029 563 aaPredicted RBP19.75■□□□□ 0.75
TMEM53-208ENST00000476724 NECTIN1Q15223 517 aa19.75■□□□□ 0.75
TMEM53-208ENST00000476724 TRIM44Q96DX7 344 aaPredicted RBP19.75■□□□□ 0.75
TMEM53-208ENST00000476724 ZSCAN31Q96LW9 406 aaPredicted RBP19.75■□□□□ 0.75
TMEM53-208ENST00000476724 CCDC8Q9H0W5 538 aaPredicted RBP19.75■□□□□ 0.75
TMEM53-208ENST00000476724 THSD7AQ9UPZ6 1657 aa19.75■□□□□ 0.75
TMEM53-208ENST00000476724 PTH1RQ03431 593 aa19.74■□□□□ 0.75
TMEM53-208ENST00000476724 RABL6Q3YEC7 729 aaPredicted RBP19.74■□□□□ 0.75
TMEM53-208ENST00000476724 CCDC171Q6TFL3 1326 aa19.74■□□□□ 0.75
TMEM53-208ENST00000476724 UBE3BQ7Z3V4 1068 aa19.74■□□□□ 0.75
TMEM53-208ENST00000476724 ZSWIM6Q9HCJ5 1215 aa19.74■□□□□ 0.75
TMEM53-208ENST00000476724 ZBTB1Q9Y2K1 713 aa19.74■□□□□ 0.75
TMEM53-208ENST00000476724 A0A087WZG4 1122 aa19.74■□□□□ 0.75
TMEM53-208ENST00000476724 CASTP20810 708 aaKnown RBP19.74■□□□□ 0.75
TMEM53-208ENST00000476724 PPP1R9BQ96SB3 815 aa19.74■□□□□ 0.75
TMEM53-208ENST00000476724 AFF2P51816 1311 aa19.73■□□□□ 0.75
TMEM53-208ENST00000476724 MAP4K1Q92918 833 aa19.73■□□□□ 0.75
TMEM53-208ENST00000476724 SH2B1Q9NRF2 756 aaPredicted RBP19.73■□□□□ 0.75
TMEM53-208ENST00000476724 CYP46A1Q9Y6A2 500 aa19.73■□□□□ 0.75
TMEM53-208ENST00000476724 CASP7P55210 303 aa19.72■□□□□ 0.75
TMEM53-208ENST00000476724 FOXD4L5Q5VV16 416 aaPredicted RBP19.72■□□□□ 0.75
TMEM53-208ENST00000476724 PRPF40BQ6NWY9 871 aaKnown RBP19.72■□□□□ 0.75
TMEM53-208ENST00000476724 RUFY3Q7L099 469 aa19.72■□□□□ 0.75
TMEM53-208ENST00000476724 FOXD4L4Q8WXT5 416 aaPredicted RBP19.72■□□□□ 0.75
TMEM53-208ENST00000476724 SIL1Q9H173 461 aa19.72■□□□□ 0.75
TMEM53-208ENST00000476724 CLCN1P35523 988 aa19.72■□□□□ 0.75
TMEM53-208ENST00000476724 PDRG1Q9NUG6 133 aa19.72■□□□□ 0.75
TMEM53-208ENST00000476724 PSMA5P28066 241 aa19.71■□□□□ 0.75
TMEM53-208ENST00000476724 RFX5P48382 616 aaPredicted RBP19.71■□□□□ 0.75
TMEM53-208ENST00000476724 SYAP1Q96A49 352 aaPredicted RBP19.71■□□□□ 0.75
TMEM53-208ENST00000476724 JAKMIP1Q96N16 626 aaKnown RBP19.71■□□□□ 0.75
TMEM53-208ENST00000476724 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.71■□□□□ 0.75
TMEM53-208ENST00000476724 PDIA4P13667 645 aaKnown RBP19.71■□□□□ 0.75
TMEM53-208ENST00000476724 NMIQ13287 307 aaPredicted RBP19.71■□□□□ 0.75
TMEM53-208ENST00000476724 FAM182BQ5T319 152 aa19.71■□□□□ 0.75
TMEM53-208ENST00000476724 RNF20Q5VTR2 975 aa19.71■□□□□ 0.75
TMEM53-208ENST00000476724 PTF1AQ7RTS3 328 aa19.71■□□□□ 0.75
TMEM53-208ENST00000476724 FSD1Q9BTV5 496 aa19.71■□□□□ 0.75
TMEM53-208ENST00000476724 PALLDQ8WX93 1383 aa19.7■□□□□ 0.74
TMEM53-208ENST00000476724 ATP5JP18859 108 aa19.7■□□□□ 0.74
TMEM53-208ENST00000476724 ATP6V1AP38606 617 aa19.7■□□□□ 0.74
TMEM53-208ENST00000476724 PTPN12Q05209 780 aaKnown RBP19.7■□□□□ 0.74
TMEM53-208ENST00000476724 LRSAM1Q6UWE0 723 aa19.7■□□□□ 0.74
TMEM53-208ENST00000476724 GJD4Q96KN9 370 aaPredicted RBP19.7■□□□□ 0.74
TMEM53-208ENST00000476724 BOLA2Q9H3K6 86 aa19.7■□□□□ 0.74
TMEM53-208ENST00000476724 CWC25Q9NXE8 425 aaPredicted RBP19.7■□□□□ 0.74
TMEM53-208ENST00000476724 SMC3Q9UQE7 1217 aa19.7■□□□□ 0.74
TMEM53-208ENST00000476724 RBM8AQ9Y5S9 174 aaKnown RBP19.7■□□□□ 0.74
TMEM53-208ENST00000476724 LOC102724428A0A0B4J2F2 783 aa19.69■□□□□ 0.74
TMEM53-208ENST00000476724 H7C1W4 665 aa19.69■□□□□ 0.74
TMEM53-208ENST00000476724 SIK1P57059 783 aa19.69■□□□□ 0.74
TMEM53-208ENST00000476724 ITPK1Q13572 414 aa19.69■□□□□ 0.74
TMEM53-208ENST00000476724 CREB3L3Q68CJ9 461 aa19.69■□□□□ 0.74
TMEM53-208ENST00000476724 KIF6Q6ZMV9 814 aa19.69■□□□□ 0.74
TMEM53-208ENST00000476724 KLHDC4Q8TBB5 520 aa19.69■□□□□ 0.74
TMEM53-208ENST00000476724 TLR7Q9NYK1 1049 aaKnown RBP19.69■□□□□ 0.74
TMEM53-208ENST00000476724 TMEM63CQ9P1W3 806 aa19.69■□□□□ 0.74
TMEM53-208ENST00000476724 ATP6V1DQ9Y5K8 247 aa19.69■□□□□ 0.74
TMEM53-208ENST00000476724 RPAP1Q9BWH6 1393 aaPredicted RBP19.69■□□□□ 0.74
TMEM53-208ENST00000476724 MYH14Q7Z406 1995 aaKnown RBP19.69■□□□□ 0.74
TMEM53-208ENST00000476724 KCNJ4P48050 445 aa19.69■□□□□ 0.74
TMEM53-208ENST00000476724 TMEM87AQ8NBN3 555 aa19.69■□□□□ 0.74
TMEM53-208ENST00000476724 ISCA1Q9BUE6 129 aa19.69■□□□□ 0.74
TMEM53-208ENST00000476724 ESPNB1AK53 854 aa19.68■□□□□ 0.74
TMEM53-208ENST00000476724 ZSCAN22P10073 491 aaPredicted RBP19.68■□□□□ 0.74
TMEM53-208ENST00000476724 TCIRG1Q13488 830 aa19.68■□□□□ 0.74
TMEM53-208ENST00000476724 HLFQ16534 295 aa19.68■□□□□ 0.74
TMEM53-208ENST00000476724 TNNI3KQ59H18 835 aa19.68■□□□□ 0.74
TMEM53-208ENST00000476724 CCDC191Q8NCU4 936 aa19.68■□□□□ 0.74
TMEM53-208ENST00000476724 FAM227BQ96M60 508 aa19.68■□□□□ 0.74
TMEM53-208ENST00000476724 FPGT-TNNI3KV9GXZ4 949 aa19.68■□□□□ 0.74
TMEM53-208ENST00000476724 RFX7Q2KHR2 1363 aa19.68■□□□□ 0.74
TMEM53-208ENST00000476724 MAP3K15Q6ZN16 1313 aa19.68■□□□□ 0.74
TMEM53-208ENST00000476724 CICQ96RK0 1608 aaPredicted RBP19.68■□□□□ 0.74
TMEM53-208ENST00000476724 STX6O43752 255 aa19.67■□□□□ 0.74
TMEM53-208ENST00000476724 ADCK5Q3MIX3 580 aa19.67■□□□□ 0.74
TMEM53-208ENST00000476724 HMG20BQ9P0W2 317 aa19.67■□□□□ 0.74
TMEM53-208ENST00000476724 RBM27Q9P2N5 1060 aaKnown RBP19.67■□□□□ 0.74
TMEM53-208ENST00000476724 NUP98P52948 1817 aa19.67■□□□□ 0.74
TMEM53-208ENST00000476724 INTS5Q6P9B9 1019 aaKnown RBP19.67■□□□□ 0.74
TMEM53-208ENST00000476724 CHAMP1Q96JM3 812 aa19.67■□□□□ 0.74
TMEM53-208ENST00000476724 ALDH8A1Q9H2A2 487 aaPredicted RBP19.67■□□□□ 0.74
TMEM53-208ENST00000476724 MED23Q9ULK4 1368 aa19.67■□□□□ 0.74
TMEM53-208ENST00000476724 ANKRD36CQ5JPF3 1778 aa19.66■□□□□ 0.74
TMEM53-208ENST00000476724 SYT1P21579 422 aa19.66■□□□□ 0.74
TMEM53-208ENST00000476724 TSGA10IPQ3SY00 556 aa19.66■□□□□ 0.74
TMEM53-208ENST00000476724 ATRNO75882 1429 aa19.66■□□□□ 0.74
TMEM53-208ENST00000476724 RREB1Q92766 1687 aa19.66■□□□□ 0.74
TMEM53-208ENST00000476724 SLC27A2O14975 620 aa19.66■□□□□ 0.74
TMEM53-208ENST00000476724 IL6STP40189 918 aaPredicted RBP19.66■□□□□ 0.74
TMEM53-208ENST00000476724 CRKLP46109 303 aaKnown RBP19.66■□□□□ 0.74
TMEM53-208ENST00000476724 FOXO4P98177 505 aa19.66■□□□□ 0.74
TMEM53-208ENST00000476724 ANKRD1Q15327 319 aa19.66■□□□□ 0.74
TMEM53-208ENST00000476724 GIGYF2Q6Y7W6 1299 aaKnown RBP19.66■□□□□ 0.74
TMEM53-208ENST00000476724 TICAM2Q86XR7 235 aa19.66■□□□□ 0.74
TMEM53-208ENST00000476724 RBSNQ9H1K0 784 aa19.66■□□□□ 0.74
TMEM53-208ENST00000476724 NSFL1CQ9UNZ2 370 aaKnown RBP19.66■□□□□ 0.74
TMEM53-208ENST00000476724 COL5A3P25940 1745 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms