RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 MAPK8IP3Q9UPT6 1336 aa15.8■□□□□ 0.12
HDAC6-219ENST00000476625 COPS6Q7L5N1 327 aa15.8■□□□□ 0.12
HDAC6-219ENST00000476625 XAGE3Q8WTP9 111 aa15.8■□□□□ 0.12
HDAC6-219ENST00000476625 ZNRF3Q9ULT6 936 aa15.8■□□□□ 0.12
HDAC6-219ENST00000476625 ZBTB12Q9Y330 459 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-219ENST00000476625 SCN9AQ15858 1988 aa15.8■□□□□ 0.12
HDAC6-219ENST00000476625 EGFRP00533 1210 aa15.79■□□□□ 0.12
HDAC6-219ENST00000476625 NEFMP07197 916 aa15.79■□□□□ 0.12
HDAC6-219ENST00000476625 SLC10A5Q5PT55 438 aa15.79■□□□□ 0.12
HDAC6-219ENST00000476625 DPP8Q6V1X1 898 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-219ENST00000476625 SAPCD2Q86UD0 394 aa15.79■□□□□ 0.12
HDAC6-219ENST00000476625 NLRP10Q86W26 655 aa15.79■□□□□ 0.12
HDAC6-219ENST00000476625 ERBB4Q15303 1308 aa15.78■□□□□ 0.12
HDAC6-219ENST00000476625 ECE1P42892 770 aa15.78■□□□□ 0.12
HDAC6-219ENST00000476625 RIPK4P57078 832 aa15.78■□□□□ 0.12
HDAC6-219ENST00000476625 PARP10Q53GL7 1025 aa15.78■□□□□ 0.12
HDAC6-219ENST00000476625 CIAPIN1Q6FI81 312 aa15.78■□□□□ 0.12
HDAC6-219ENST00000476625 BCL2L13Q9BXK5 485 aa15.78■□□□□ 0.12
HDAC6-219ENST00000476625 RTFDC1Q9BY42 306 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-219ENST00000476625 KIAA2012Q0VF49 1180 aa15.77■□□□□ 0.12
HDAC6-219ENST00000476625 SAMD7Q7Z3H4 446 aa15.77■□□□□ 0.12
HDAC6-219ENST00000476625 USP48Q86UV5 1035 aa15.77■□□□□ 0.12
HDAC6-219ENST00000476625 SP8Q8IXZ3 490 aa15.77■□□□□ 0.12
HDAC6-219ENST00000476625 CCDC146Q8IYE0 955 aa15.77■□□□□ 0.12
HDAC6-219ENST00000476625 MPNDQ8N594 471 aa15.77■□□□□ 0.12
HDAC6-219ENST00000476625 KCNQ5Q9NR82 932 aa15.77■□□□□ 0.12
HDAC6-219ENST00000476625 SPEF2Q9C093 1822 aa15.76■□□□□ 0.11
HDAC6-219ENST00000476625 RIMBP2O15034 1052 aa15.76■□□□□ 0.11
HDAC6-219ENST00000476625 RTL5Q5HYW3 569 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-219ENST00000476625 MICALL2Q8IY33 904 aa15.76■□□□□ 0.11
HDAC6-219ENST00000476625 CELF1Q92879 486 aaKnown RBP15.76■□□□□ 0.11
HDAC6-219ENST00000476625 CFAP44Q96MT7 982 aa15.76■□□□□ 0.11
HDAC6-219ENST00000476625 BEGAINQ9BUH8 593 aa15.76■□□□□ 0.11
HDAC6-219ENST00000476625 MCOLN1Q9GZU1 580 aa15.76■□□□□ 0.11
HDAC6-219ENST00000476625 DBNDD1Q9H9R9 158 aa15.76■□□□□ 0.11
HDAC6-219ENST00000476625 TRMT112Q9UI30 125 aaKnown RBP15.76■□□□□ 0.11
HDAC6-219ENST00000476625 CNOT7Q9UIV1 285 aaKnown RBP15.76■□□□□ 0.11
HDAC6-219ENST00000476625 GRAPQ13588 217 aa15.75■□□□□ 0.11
HDAC6-219ENST00000476625 NEUROD2Q15784 382 aa15.75■□□□□ 0.11
HDAC6-219ENST00000476625 GRIPAP1Q4V328 841 aa15.75■□□□□ 0.11
HDAC6-219ENST00000476625 GRAPLQ8TC17 118 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-219ENST00000476625 CHPF2Q9P2E5 772 aa15.75■□□□□ 0.11
HDAC6-219ENST00000476625 PGAP2Q9UHJ9 254 aa15.75■□□□□ 0.11
HDAC6-219ENST00000476625 ASTN2O75129 1339 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-219ENST00000476625 ADM5C9JUS6 153 aa15.74■□□□□ 0.11
HDAC6-219ENST00000476625 ATP5J2-PTCD1G3V325 749 aa15.74■□□□□ 0.11
HDAC6-219ENST00000476625 TMPOP42166 694 aaKnown RBP15.74■□□□□ 0.11
HDAC6-219ENST00000476625 TCIRG1Q13488 830 aa15.74■□□□□ 0.11
HDAC6-219ENST00000476625 TBC1D10BQ4KMP7 808 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-219ENST00000476625 DDX46Q7L014 1031 aaKnown RBP15.74■□□□□ 0.11
HDAC6-219ENST00000476625 SUPT20HQ8NEM7 779 aa15.74■□□□□ 0.11
HDAC6-219ENST00000476625 LAS1LQ9Y4W2 734 aaKnown RBP15.74■□□□□ 0.11
HDAC6-219ENST00000476625 RTL9Q8NET4 1388 aa15.74■□□□□ 0.11
HDAC6-219ENST00000476625 SH3TC1Q8TE82 1336 aa15.73■□□□□ 0.11
HDAC6-219ENST00000476625 PSMD14O00487 310 aa15.73■□□□□ 0.11
HDAC6-219ENST00000476625 BBOX1O75936 387 aa15.73■□□□□ 0.11
HDAC6-219ENST00000476625 DOK7Q18PE1 504 aa15.73■□□□□ 0.11
HDAC6-219ENST00000476625 RBM26Q5T8P6 1007 aaKnown RBP15.73■□□□□ 0.11
HDAC6-219ENST00000476625 TMX4Q9H1E5 349 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-219ENST00000476625 SLC34A2O95436 690 aa15.72■□□□□ 0.11
HDAC6-219ENST00000476625 MAP2K2P36507 400 aa15.72■□□□□ 0.11
HDAC6-219ENST00000476625 GPSM2P81274 684 aa15.72■□□□□ 0.11
HDAC6-219ENST00000476625 FAM89AQ96GI7 184 aa15.72■□□□□ 0.11
HDAC6-219ENST00000476625 POLLQ9UGP5 575 aa15.72■□□□□ 0.11
HDAC6-219ENST00000476625 ZNF646O15015 1829 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-219ENST00000476625 PSME4Q14997 1843 aa15.71■□□□□ 0.11
HDAC6-219ENST00000476625 MLLT1Q03111 559 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-219ENST00000476625 DGKZQ13574 1117 aa15.71■□□□□ 0.11
HDAC6-219ENST00000476625 VPS33BQ9H267 617 aa15.71■□□□□ 0.11
HDAC6-219ENST00000476625 SCAF8Q9UPN6 1271 aaKnown RBP15.71■□□□□ 0.11
HDAC6-219ENST00000476625 FAM155AB1AL88 458 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-219ENST00000476625 BRPF1P55201 1214 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-219ENST00000476625 HUNKP57058 714 aa15.7■□□□□ 0.1
HDAC6-219ENST00000476625 TNIP1Q15025 636 aa15.7■□□□□ 0.1
HDAC6-219ENST00000476625 CDC37L1Q7L3B6 337 aa15.7■□□□□ 0.1
HDAC6-219ENST00000476625 JARID2Q92833 1246 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-219ENST00000476625 NSFL1CQ9UNZ2 370 aaKnown RBP15.7■□□□□ 0.1
HDAC6-219ENST00000476625 AKAP11Q9UKA4 1901 aa15.7■□□□□ 0.1
HDAC6-219ENST00000476625 C6orf229H3BNL8 230 aa15.69■□□□□ 0.1
HDAC6-219ENST00000476625 ECE2O60344 883 aa15.69■□□□□ 0.1
HDAC6-219ENST00000476625 HSP90AB3PQ58FF7 597 aa15.69■□□□□ 0.1
HDAC6-219ENST00000476625 TRIM35Q9UPQ4 493 aa15.69■□□□□ 0.1
HDAC6-219ENST00000476625 CDHR2Q9BYE9 1310 aa15.68■□□□□ 0.1
HDAC6-219ENST00000476625 H7C1D1 291 aa15.68■□□□□ 0.1
HDAC6-219ENST00000476625 RGS19P49795 217 aa15.68■□□□□ 0.1
HDAC6-219ENST00000476625 WASHC4Q2M389 1173 aa15.68■□□□□ 0.1
HDAC6-219ENST00000476625 ISCA1Q9BUE6 129 aa15.68■□□□□ 0.1
HDAC6-219ENST00000476625 SEC31BQ9NQW1 1179 aa15.68■□□□□ 0.1
HDAC6-219ENST00000476625 TNRC18O15417 2968 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-219ENST00000476625 CHL1O00533 1208 aa15.67■□□□□ 0.1
HDAC6-219ENST00000476625 HDGFL1Q5TGJ6 251 aa15.67■□□□□ 0.1
HDAC6-219ENST00000476625 KRT26Q7Z3Y9 468 aa15.67■□□□□ 0.1
HDAC6-219ENST00000476625 ZC3H15Q8WU90 426 aaKnown RBP15.67■□□□□ 0.1
HDAC6-219ENST00000476625 HHIPL1Q96JK4 782 aa15.67■□□□□ 0.1
HDAC6-219ENST00000476625 CCDC85AQ96PX6 553 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-219ENST00000476625 WTIPA6NIX2 430 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-219ENST00000476625 KIF23Q02241 960 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-219ENST00000476625 PLBD2Q8NHP8 589 aa15.66■□□□□ 0.1
HDAC6-219ENST00000476625 PNNQ9H307 717 aaKnown RBP15.66■□□□□ 0.1
HDAC6-219ENST00000476625 SOX10P56693 466 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms