RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 GPRC5DQ9NZD1 345 aa17.13■□□□□ 0.33
MRPL55-228ENST00000476267 ZNRF3Q9ULT6 936 aa17.13■□□□□ 0.33
MRPL55-228ENST00000476267 ZNF853P0CG23 659 aa17.12■□□□□ 0.33
MRPL55-228ENST00000476267 FMR1Q06787 632 aaKnown RBP eCLIP17.12■□□□□ 0.33
MRPL55-228ENST00000476267 WDR43Q15061 677 aaKnown RBP eCLIP17.12■□□□□ 0.33
MRPL55-228ENST00000476267 DEFB115Q30KQ5 88 aa17.11■□□□□ 0.33
MRPL55-228ENST00000476267 DPP8Q6V1X1 898 aaPredicted RBP17.11■□□□□ 0.33
MRPL55-228ENST00000476267 ANKRD13DQ6ZTN6 518 aa17.11■□□□□ 0.33
MRPL55-228ENST00000476267 DDX46Q7L014 1031 aaKnown RBP17.11■□□□□ 0.33
MRPL55-228ENST00000476267 PRKRIP1Q9H875 184 aaPredicted RBP17.11■□□□□ 0.33
MRPL55-228ENST00000476267 MBIPQ9NS73 344 aa17.11■□□□□ 0.33
MRPL55-228ENST00000476267 WBP1LQ9NX94 342 aa17.11■□□□□ 0.33
MRPL55-228ENST00000476267 DBF4Q9UBU7 674 aaPredicted RBP17.11■□□□□ 0.33
MRPL55-228ENST00000476267 LAS1LQ9Y4W2 734 aaKnown RBP17.11■□□□□ 0.33
MRPL55-228ENST00000476267 YDJCA8MPS7 323 aa17.1■□□□□ 0.33
MRPL55-228ENST00000476267 SF3B3Q15393 1217 aaKnown RBP17.1■□□□□ 0.33
MRPL55-228ENST00000476267 CST9Q5W186 159 aa17.1■□□□□ 0.33
MRPL55-228ENST00000476267 TMC4Q7Z404 712 aa17.1■□□□□ 0.33
MRPL55-228ENST00000476267 MPNDQ8N594 471 aa17.1■□□□□ 0.33
MRPL55-228ENST00000476267 PRDM10Q9NQV6 1147 aa17.1■□□□□ 0.33
MRPL55-228ENST00000476267 ADARB2Q9NS39 739 aaKnown RBP17.1■□□□□ 0.33
MRPL55-228ENST00000476267 CDHR2Q9BYE9 1310 aa17.1■□□□□ 0.33
MRPL55-228ENST00000476267 GMPSP49915 693 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-228ENST00000476267 DUSP27Q5VZP5 1158 aa17.09■□□□□ 0.33
MRPL55-228ENST00000476267 ZNF428Q96B54 188 aa17.09■□□□□ 0.33
MRPL55-228ENST00000476267 TMX4Q9H1E5 349 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-228ENST00000476267 PGAP2Q9UHJ9 254 aa17.09■□□□□ 0.33
MRPL55-228ENST00000476267 WDR33Q9C0J8 1336 aaKnown RBP17.09■□□□□ 0.33
MRPL55-228ENST00000476267 CAPN15O75808 1086 aa17.08■□□□□ 0.32
MRPL55-228ENST00000476267 TRIM28Q13263 835 aaKnown RBP17.08■□□□□ 0.32
MRPL55-228ENST00000476267 CELF1Q92879 486 aaKnown RBP17.08■□□□□ 0.32
MRPL55-228ENST00000476267 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
MRPL55-228ENST00000476267 HYPKQ9NX55 129 aa17.08■□□□□ 0.32
MRPL55-228ENST00000476267 ATP5J2-PTCD1G3V325 749 aa17.07■□□□□ 0.32
MRPL55-228ENST00000476267 TRAF5O00463 557 aa17.07■□□□□ 0.32
MRPL55-228ENST00000476267 CTCFP49711 727 aaPredicted RBP17.07■□□□□ 0.32
MRPL55-228ENST00000476267 CIAPIN1Q6FI81 312 aa17.07■□□□□ 0.32
MRPL55-228ENST00000476267 HIRAP54198 1017 aaPredicted RBP17.06■□□□□ 0.32
MRPL55-228ENST00000476267 ABT1Q9ULW3 272 aaKnown RBP17.06■□□□□ 0.32
MRPL55-228ENST00000476267 TLL2Q9Y6L7 1015 aa17.06■□□□□ 0.32
MRPL55-228ENST00000476267 RAD17O75943 681 aa17.05■□□□□ 0.32
MRPL55-228ENST00000476267 IFT57Q9NWB7 429 aa17.05■□□□□ 0.32
MRPL55-228ENST00000476267 SHTN1A0MZ66 631 aa17.04■□□□□ 0.32
MRPL55-228ENST00000476267 APAF1O14727 1248 aa17.04■□□□□ 0.32
MRPL55-228ENST00000476267 HSPA8P11142 646 aaKnown RBP17.04■□□□□ 0.32
MRPL55-228ENST00000476267 TNIP1Q15025 636 aa17.04■□□□□ 0.32
MRPL55-228ENST00000476267 AIDAQ96BJ3 306 aa17.04■□□□□ 0.32
MRPL55-228ENST00000476267 PHAXQ9H814 394 aaKnown RBP17.04■□□□□ 0.32
MRPL55-228ENST00000476267 POLLQ9UGP5 575 aa17.04■□□□□ 0.32
MRPL55-228ENST00000476267 SCN9AQ15858 1988 aa17.04■□□□□ 0.32
MRPL55-228ENST00000476267 PSME4Q14997 1843 aa17.03■□□□□ 0.32
MRPL55-228ENST00000476267 IRS4O14654 1257 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-228ENST00000476267 LBX1P52954 281 aa17.03■□□□□ 0.32
MRPL55-228ENST00000476267 GPSM2P81274 684 aa17.03■□□□□ 0.32
MRPL55-228ENST00000476267 TRPM4Q8TD43 1214 aa17.03■□□□□ 0.32
MRPL55-228ENST00000476267 ZC3H15Q8WU90 426 aaKnown RBP17.03■□□□□ 0.32
MRPL55-228ENST00000476267 CAPNS2Q96L46 248 aa17.03■□□□□ 0.32
MRPL55-228ENST00000476267 RTL9Q8NET4 1388 aa17.02■□□□□ 0.32
MRPL55-228ENST00000476267 GNAI1P63096 354 aa17.02■□□□□ 0.32
MRPL55-228ENST00000476267 MAP2K1Q02750 393 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-228ENST00000476267 CYP4F22Q6NT55 531 aa17.02■□□□□ 0.32
MRPL55-228ENST00000476267 SAPCD2Q86UD0 394 aa17.02■□□□□ 0.32
MRPL55-228ENST00000476267 ZBTB38Q8NAP3 1195 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-228ENST00000476267 GLIS2Q9BZE0 524 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-228ENST00000476267 CNOT7Q9UIV1 285 aaKnown RBP17.02■□□□□ 0.32
MRPL55-228ENST00000476267 WASHC4Q2M389 1173 aa17.01■□□□□ 0.31
MRPL55-228ENST00000476267 RTL5Q5HYW3 569 aaPredicted RBP17.01■□□□□ 0.31
MRPL55-228ENST00000476267 C8orf58Q8NAV2 365 aa17.01■□□□□ 0.31
MRPL55-228ENST00000476267 DPF2Q92785 391 aa17.01■□□□□ 0.31
MRPL55-228ENST00000476267 HHIPL1Q96JK4 782 aa17.01■□□□□ 0.31
MRPL55-228ENST00000476267 BCL2L13Q9BXK5 485 aa17.01■□□□□ 0.31
MRPL55-228ENST00000476267 NSFL1CQ9UNZ2 370 aaKnown RBP17.01■□□□□ 0.31
MRPL55-228ENST00000476267 ZNF646O15015 1829 aaPredicted RBP17■□□□□ 0.31
MRPL55-228ENST00000476267 PSMD14O00487 310 aa17■□□□□ 0.31
MRPL55-228ENST00000476267 ZNF609O15014 1411 aa17■□□□□ 0.31
MRPL55-228ENST00000476267 ECE1P42892 770 aa17■□□□□ 0.31
MRPL55-228ENST00000476267 RIC3Q7Z5B4 369 aa17■□□□□ 0.31
MRPL55-228ENST00000476267 MICALL2Q8IY33 904 aa17■□□□□ 0.31
MRPL55-228ENST00000476267 TBC1D16Q8TBP0 767 aa17■□□□□ 0.31
MRPL55-228ENST00000476267 DBNDD1Q9H9R9 158 aa17■□□□□ 0.31
MRPL55-228ENST00000476267 PODXL2Q9NZ53 605 aa17■□□□□ 0.31
MRPL55-228ENST00000476267 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
MRPL55-228ENST00000476267 ELL2O00472 640 aaPredicted RBP16.99■□□□□ 0.31
MRPL55-228ENST00000476267 CELF2O95319 508 aaKnown RBP16.99■□□□□ 0.31
MRPL55-228ENST00000476267 EGFRP00533 1210 aa16.99■□□□□ 0.31
MRPL55-228ENST00000476267 RPS8P62241 208 aaKnown RBP16.99■□□□□ 0.31
MRPL55-228ENST00000476267 CALD1Q05682 793 aaKnown RBP16.99■□□□□ 0.31
MRPL55-228ENST00000476267 GOLGA2Q08379 1002 aa16.99■□□□□ 0.31
MRPL55-228ENST00000476267 CCDC191Q8NCU4 936 aa16.99■□□□□ 0.31
MRPL55-228ENST00000476267 GPR101Q96P66 508 aaPredicted RBP16.99■□□□□ 0.31
MRPL55-228ENST00000476267 MYD88Q99836 296 aa16.99■□□□□ 0.31
MRPL55-228ENST00000476267 SEC31BQ9NQW1 1179 aa16.99■□□□□ 0.31
MRPL55-228ENST00000476267 KCNQ5Q9NR82 932 aa16.99■□□□□ 0.31
MRPL55-228ENST00000476267 RIMBP2O15034 1052 aa16.98■□□□□ 0.31
MRPL55-228ENST00000476267 ECE2O60344 883 aa16.98■□□□□ 0.31
MRPL55-228ENST00000476267 PCCAP05165 728 aaPredicted RBP16.98■□□□□ 0.31
MRPL55-228ENST00000476267 CDC37L1Q7L3B6 337 aa16.98■□□□□ 0.31
MRPL55-228ENST00000476267 MYH3P11055 1940 aa16.98■□□□□ 0.31
MRPL55-228ENST00000476267 C6orf229H3BNL8 230 aa16.97■□□□□ 0.31
MRPL55-228ENST00000476267 H7C1D1 291 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms