RNA–Protein interactions for RNA: ENST00000476104.1

SLC48A1-204, Transcript of solute carrier family 48 member 1, human

TSL 4

Gene SLC48A1, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC48A1-204	ENST00000476104	C8orf58	Q8NAV2	365 aa		18.3	■□□□□ 0.52
SLC48A1-204	ENST00000476104	RTFDC1	Q9BY42	306 aa	Predicted RBP	18.3	■□□□□ 0.52
SLC48A1-204	ENST00000476104	PHAX	Q9H814	394 aa	Known RBP	18.3	■□□□□ 0.52
SLC48A1-204	ENST00000476104	LAMB2	P55268	1798 aa		18.3	■□□□□ 0.52
SLC48A1-204	ENST00000476104	IRS4	O14654	1257 aa	Predicted RBP	18.29	■□□□□ 0.52
SLC48A1-204	ENST00000476104	ANP32C	O43423	234 aa		18.29	■□□□□ 0.52
SLC48A1-204	ENST00000476104	SF3B3	Q15393	1217 aa	Known RBP	18.29	■□□□□ 0.52
SLC48A1-204	ENST00000476104	MRS2	Q9HD23	443 aa		18.29	■□□□□ 0.52
SLC48A1-204	ENST00000476104	ZNRF3	Q9ULT6	936 aa		18.29	■□□□□ 0.52
SLC48A1-204	ENST00000476104	COL4A5	P29400	1685 aa		18.28	■□□□□ 0.52
SLC48A1-204	ENST00000476104	MYD88	Q99836	296 aa		18.28	■□□□□ 0.52
SLC48A1-204	ENST00000476104	PASK	Q96RG2	1323 aa		18.27	■□□□□ 0.52
SLC48A1-204	ENST00000476104	ZNF316	A6NFI3	1004 aa	Predicted RBP	18.27	■□□□□ 0.52
SLC48A1-204	ENST00000476104	ITGBL1	O95965	494 aa	Predicted RBP	18.27	■□□□□ 0.52
SLC48A1-204	ENST00000476104	KIAA2012	Q0VF49	1180 aa		18.27	■□□□□ 0.52
SLC48A1-204	ENST00000476104	CCDC27	Q2M243	656 aa		18.27	■□□□□ 0.52
SLC48A1-204	ENST00000476104	MAP1S	Q66K74	1059 aa	Predicted RBP	18.27	■□□□□ 0.52
SLC48A1-204	ENST00000476104	CNTROB	Q8N137	903 aa		18.27	■□□□□ 0.52
SLC48A1-204	ENST00000476104	STK31	Q9BXU1	1019 aa		18.27	■□□□□ 0.52
SLC48A1-204	ENST00000476104	MKRN1	Q9UHC7	482 aa	Known RBP	18.27	■□□□□ 0.52
SLC48A1-204	ENST00000476104	TMEM88B	A6NKF7	163 aa		18.26	■□□□□ 0.51
SLC48A1-204	ENST00000476104	EPS15	P42566	896 aa		18.26	■□□□□ 0.51
SLC48A1-204	ENST00000476104	SCNN1D	P51172	638 aa		18.26	■□□□□ 0.51
SLC48A1-204	ENST00000476104	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.26	■□□□□ 0.51
SLC48A1-204	ENST00000476104	CCDC191	Q8NCU4	936 aa		18.26	■□□□□ 0.51
SLC48A1-204	ENST00000476104	TSR2	Q969E8	191 aa	Known RBP	18.26	■□□□□ 0.51
SLC48A1-204	ENST00000476104	CXCL9	Q07325	125 aa		18.25	■□□□□ 0.51
SLC48A1-204	ENST00000476104	TNIP1	Q15025	636 aa		18.25	■□□□□ 0.51
SLC48A1-204	ENST00000476104	CIAPIN1	Q6FI81	312 aa		18.25	■□□□□ 0.51
SLC48A1-204	ENST00000476104	USP50	Q70EL3	339 aa	Predicted RBP	18.25	■□□□□ 0.51
SLC48A1-204	ENST00000476104	WWC1	Q8IX03	1113 aa		18.25	■□□□□ 0.51
SLC48A1-204	ENST00000476104	CELF1	Q92879	486 aa	Known RBP	18.25	■□□□□ 0.51
SLC48A1-204	ENST00000476104	CWC25	Q9NXE8	425 aa	Predicted RBP	18.25	■□□□□ 0.51
SLC48A1-204	ENST00000476104	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.25	■□□□□ 0.51
SLC48A1-204	ENST00000476104	TAF1	P21675	1872 aa		18.24	■□□□□ 0.51
SLC48A1-204	ENST00000476104	DDX60	Q8IY21	1712 aa	Known RBP	18.24	■□□□□ 0.51
SLC48A1-204	ENST00000476104	TSPYL6	Q8N831	410 aa		18.24	■□□□□ 0.51
SLC48A1-204	ENST00000476104	METTL22	Q9BUU2	404 aa	Predicted RBP	18.24	■□□□□ 0.51
SLC48A1-204	ENST00000476104	BCL2L13	Q9BXK5	485 aa		18.24	■□□□□ 0.51
SLC48A1-204	ENST00000476104	C6orf229	H3BNL8	230 aa		18.23	■□□□□ 0.51
SLC48A1-204	ENST00000476104	RAD17	O75943	681 aa		18.23	■□□□□ 0.51
SLC48A1-204	ENST00000476104	PCCA	P05165	728 aa	Predicted RBP	18.23	■□□□□ 0.51
SLC48A1-204	ENST00000476104	RPS8	P62241	208 aa	Known RBP	18.23	■□□□□ 0.51
SLC48A1-204	ENST00000476104	WASHC4	Q2M389	1173 aa		18.23	■□□□□ 0.51
SLC48A1-204	ENST00000476104	GPRC5D	Q9NZD1	345 aa		18.23	■□□□□ 0.51
SLC48A1-204	ENST00000476104	MAP3K2	Q9Y2U5	619 aa		18.23	■□□□□ 0.51
SLC48A1-204	ENST00000476104	HSPA1A	P0DMV8	641 aa	Known RBP	18.22	■□□□□ 0.51
SLC48A1-204	ENST00000476104	HSPA1B	P0DMV9	641 aa	Known RBP	18.22	■□□□□ 0.51
SLC48A1-204	ENST00000476104	GMPS	P49915	693 aa	Predicted RBP	18.22	■□□□□ 0.51
SLC48A1-204	ENST00000476104	NEXN	Q0ZGT2	675 aa		18.22	■□□□□ 0.51
SLC48A1-204	ENST00000476104	TWISTNB	Q3B726	338 aa	Predicted RBP	18.22	■□□□□ 0.51
SLC48A1-204	ENST00000476104	CCDC152	Q4G0S7	254 aa		18.22	■□□□□ 0.51
SLC48A1-204	ENST00000476104	KSR2	Q6VAB6	950 aa		18.22	■□□□□ 0.51
SLC48A1-204	ENST00000476104	EYA3	Q99504	573 aa		18.22	■□□□□ 0.51
SLC48A1-204	ENST00000476104	ADARB2	Q9NS39	739 aa	Known RBP	18.22	■□□□□ 0.51
SLC48A1-204	ENST00000476104	ADAMTSL1	Q8N6G6	1762 aa		18.22	■□□□□ 0.51
SLC48A1-204	ENST00000476104	IL16	Q14005	1332 aa		18.22	■□□□□ 0.51
SLC48A1-204	ENST00000476104	CNTNAP1	P78357	1384 aa		18.21	■□□□□ 0.51
SLC48A1-204	ENST00000476104	PDE8A	O60658	829 aa		18.21	■□□□□ 0.51
SLC48A1-204	ENST00000476104	NCBP3	Q53F19	620 aa	Known RBP	18.21	■□□□□ 0.51
SLC48A1-204	ENST00000476104	PI4KAP2	A4QPH2	592 aa		18.2	■□□□□ 0.5
SLC48A1-204	ENST00000476104	GPSM2	P81274	684 aa		18.2	■□□□□ 0.5
SLC48A1-204	ENST00000476104	PI4KAP1	Q8N8J0	262 aa		18.2	■□□□□ 0.5
SLC48A1-204	ENST00000476104	CDHR2	Q9BYE9	1310 aa		18.2	■□□□□ 0.5
SLC48A1-204	ENST00000476104	RIMBP2	O15034	1052 aa		18.19	■□□□□ 0.5
SLC48A1-204	ENST00000476104	SLC4A2	P04920	1241 aa		18.19	■□□□□ 0.5
SLC48A1-204	ENST00000476104	LTBP1	Q14766	1721 aa		18.19	■□□□□ 0.5
SLC48A1-204	ENST00000476104	JARID2	Q92833	1246 aa	Predicted RBP	18.19	■□□□□ 0.5
SLC48A1-204	ENST00000476104	SEC31B	Q9NQW1	1179 aa		18.19	■□□□□ 0.5
SLC48A1-204	ENST00000476104	ANKIB1	Q9P2G1	1089 aa		18.19	■□□□□ 0.5
SLC48A1-204	ENST00000476104	ABT1	Q9ULW3	272 aa	Known RBP	18.19	■□□□□ 0.5
SLC48A1-204	ENST00000476104	SALL2	Q9Y467	1007 aa	Predicted RBP	18.19	■□□□□ 0.5
SLC48A1-204	ENST00000476104	LRRC37A	A6NMS7	1700 aa		18.18	■□□□□ 0.5
SLC48A1-204	ENST00000476104		G3V3G9	751 aa		18.18	■□□□□ 0.5
SLC48A1-204	ENST00000476104	DEFB115	Q30KQ5	88 aa		18.18	■□□□□ 0.5
SLC48A1-204	ENST00000476104	DCAF8	Q5TAQ9	597 aa		18.18	■□□□□ 0.5
SLC48A1-204	ENST00000476104	COL13A1	Q5TAT6	717 aa	Predicted RBP	18.18	■□□□□ 0.5
SLC48A1-204	ENST00000476104	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.18	■□□□□ 0.5
SLC48A1-204	ENST00000476104	POLL	Q9UGP5	575 aa		18.18	■□□□□ 0.5
SLC48A1-204	ENST00000476104	YDJC	A8MPS7	323 aa		18.17	■□□□□ 0.5
SLC48A1-204	ENST00000476104		H7C1D1	291 aa		18.17	■□□□□ 0.5
SLC48A1-204	ENST00000476104	VEGFB	P49765	207 aa		18.17	■□□□□ 0.5
SLC48A1-204	ENST00000476104	WDR63	Q8IWG1	891 aa		18.17	■□□□□ 0.5
SLC48A1-204	ENST00000476104	TBC1D16	Q8TBP0	767 aa		18.17	■□□□□ 0.5
SLC48A1-204	ENST00000476104	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.17	■□□□□ 0.5
SLC48A1-204	ENST00000476104	DBNDD1	Q9H9R9	158 aa		18.17	■□□□□ 0.5
SLC48A1-204	ENST00000476104	DUOX1	Q9NRD9	1551 aa		18.17	■□□□□ 0.5
SLC48A1-204	ENST00000476104	UFL1	O94874	794 aa		18.16	■□□□□ 0.5
SLC48A1-204	ENST00000476104	ANKRD18A	Q8IVF6	992 aa		18.16	■□□□□ 0.5
SLC48A1-204	ENST00000476104	CNOT7	Q9UIV1	285 aa	Known RBP	18.16	■□□□□ 0.5
SLC48A1-204	ENST00000476104	RASSF10	A6NK89	507 aa		18.15	■□□□□ 0.5
SLC48A1-204	ENST00000476104	ECE2	O60344	883 aa		18.15	■□□□□ 0.5
SLC48A1-204	ENST00000476104	IGKV5-2	P06315	115 aa		18.15	■□□□□ 0.5
SLC48A1-204	ENST00000476104	DOK7	Q18PE1	504 aa		18.15	■□□□□ 0.5
SLC48A1-204	ENST00000476104	AIDA	Q96BJ3	306 aa		18.15	■□□□□ 0.5
SLC48A1-204	ENST00000476104	CDC5L	Q99459	802 aa	Known RBP	18.15	■□□□□ 0.5
SLC48A1-204	ENST00000476104	PODXL2	Q9NZ53	605 aa		18.15	■□□□□ 0.5
SLC48A1-204	ENST00000476104	GGA1	Q9UJY5	639 aa		18.15	■□□□□ 0.5
SLC48A1-204	ENST00000476104	FANCI	Q9NVI1	1328 aa		18.15	■□□□□ 0.5
SLC48A1-204	ENST00000476104	TRAF5	O00463	557 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 90 ms