RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 CLEC11AQ9Y240 323 aa12.85□□□□□ -0.35
PTPN7-208ENST00000476061 CNTNAP1P78357 1384 aa12.84□□□□□ -0.35
PTPN7-208ENST00000476061 KIAA2012Q0VF49 1180 aa12.84□□□□□ -0.35
PTPN7-208ENST00000476061 AOC3Q16853 763 aa12.84□□□□□ -0.35
PTPN7-208ENST00000476061 CNTROBQ8N137 903 aa12.84□□□□□ -0.35
PTPN7-208ENST00000476061 ZNRF3Q9ULT6 936 aa12.84□□□□□ -0.35
PTPN7-208ENST00000476061 GJA3Q9Y6H8 435 aa12.84□□□□□ -0.35
PTPN7-208ENST00000476061 DUOX1Q9NRD9 1551 aa12.84□□□□□ -0.35
PTPN7-208ENST00000476061 CDHR2Q9BYE9 1310 aa12.84□□□□□ -0.35
PTPN7-208ENST00000476061 HSPA1AP0DMV8 641 aaKnown RBP12.83□□□□□ -0.36
PTPN7-208ENST00000476061 HSPA1BP0DMV9 641 aaKnown RBP12.83□□□□□ -0.36
PTPN7-208ENST00000476061 HSP90B1P14625 803 aaKnown RBP12.83□□□□□ -0.36
PTPN7-208ENST00000476061 CCDC27Q2M243 656 aa12.83□□□□□ -0.36
PTPN7-208ENST00000476061 NCBP3Q53F19 620 aaKnown RBP12.83□□□□□ -0.36
PTPN7-208ENST00000476061 SLC51AQ86UW1 340 aa12.83□□□□□ -0.36
PTPN7-208ENST00000476061 FAM89AQ96GI7 184 aa12.83□□□□□ -0.36
PTPN7-208ENST00000476061 CACNA1FO60840 1977 aa12.83□□□□□ -0.36
PTPN7-208ENST00000476061 ATP5J2-PTCD1G3V325 749 aa12.82□□□□□ -0.36
PTPN7-208ENST00000476061 EPS15P42566 896 aa12.82□□□□□ -0.36
PTPN7-208ENST00000476061 CXCL9Q07325 125 aa12.82□□□□□ -0.36
PTPN7-208ENST00000476061 GOLGA2Q08379 1002 aa12.82□□□□□ -0.36
PTPN7-208ENST00000476061 MAP1SQ66K74 1059 aaPredicted RBP12.82□□□□□ -0.36
PTPN7-208ENST00000476061 RIC3Q7Z5B4 369 aa12.82□□□□□ -0.36
PTPN7-208ENST00000476061 GPRC5DQ9NZD1 345 aa12.82□□□□□ -0.36
PTPN7-208ENST00000476061 MKRN1Q9UHC7 482 aaKnown RBP12.82□□□□□ -0.36
PTPN7-208ENST00000476061 RASSF10A6NK89 507 aa12.81□□□□□ -0.36
PTPN7-208ENST00000476061 COL13A1Q5TAT6 717 aaPredicted RBP12.81□□□□□ -0.36
PTPN7-208ENST00000476061 CCDC30Q5VVM6 783 aa12.81□□□□□ -0.36
PTPN7-208ENST00000476061 CIAPIN1Q6FI81 312 aa12.81□□□□□ -0.36
PTPN7-208ENST00000476061 ZBTB38Q8NAP3 1195 aaPredicted RBP12.81□□□□□ -0.36
PTPN7-208ENST00000476061 CCDC191Q8NCU4 936 aa12.81□□□□□ -0.36
PTPN7-208ENST00000476061 PHAXQ9H814 394 aaKnown RBP12.81□□□□□ -0.36
PTPN7-208ENST00000476061 ADARB2Q9NS39 739 aaKnown RBP12.81□□□□□ -0.36
PTPN7-208ENST00000476061 MYH3P11055 1940 aa12.81□□□□□ -0.36
PTPN7-208ENST00000476061 ELL2O00472 640 aaPredicted RBP12.8□□□□□ -0.36
PTPN7-208ENST00000476061 IRS4O14654 1257 aaPredicted RBP12.8□□□□□ -0.36
PTPN7-208ENST00000476061 DDX58O95786 925 aaKnown RBP12.8□□□□□ -0.36
PTPN7-208ENST00000476061 TNIP1Q15025 636 aa12.8□□□□□ -0.36
PTPN7-208ENST00000476061 C8orf58Q8NAV2 365 aa12.8□□□□□ -0.36
PTPN7-208ENST00000476061 CELF1Q92879 486 aaKnown RBP12.8□□□□□ -0.36
PTPN7-208ENST00000476061 PCCAP05165 728 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-208ENST00000476061 METTL22Q9BUU2 404 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-208ENST00000476061 PGAP2Q9UHJ9 254 aa12.79□□□□□ -0.36
PTPN7-208ENST00000476061 NSFL1CQ9UNZ2 370 aaKnown RBP12.79□□□□□ -0.36
PTPN7-208ENST00000476061 THSD7BQ9C0I4 1608 aa12.79□□□□□ -0.36
PTPN7-208ENST00000476061 COL4A1P02462 1669 aa12.79□□□□□ -0.36
PTPN7-208ENST00000476061 PSME4Q14997 1843 aa12.78□□□□□ -0.36
PTPN7-208ENST00000476061 VEGFBP49765 207 aa12.78□□□□□ -0.36
PTPN7-208ENST00000476061 RPS8P62241 208 aaKnown RBP12.78□□□□□ -0.36
PTPN7-208ENST00000476061 WASHC4Q2M389 1173 aa12.78□□□□□ -0.36
PTPN7-208ENST00000476061 DEFB115Q30KQ5 88 aa12.78□□□□□ -0.36
PTPN7-208ENST00000476061 ZC3H15Q8WU90 426 aaKnown RBP12.78□□□□□ -0.36
PTPN7-208ENST00000476061 EYA3Q99504 573 aa12.78□□□□□ -0.36
PTPN7-208ENST00000476061 MYD88Q99836 296 aa12.78□□□□□ -0.36
PTPN7-208ENST00000476061 IL16Q14005 1332 aa12.78□□□□□ -0.36
PTPN7-208ENST00000476061 YDJCA8MPS7 323 aa12.77□□□□□ -0.37
PTPN7-208ENST00000476061 PDE8AO60658 829 aa12.77□□□□□ -0.37
PTPN7-208ENST00000476061 GMPSP49915 693 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-208ENST00000476061 CCDC184Q52MB2 194 aa12.77□□□□□ -0.37
PTPN7-208ENST00000476061 KSR2Q6VAB6 950 aa12.77□□□□□ -0.37
PTPN7-208ENST00000476061 WWC1Q8IX03 1113 aa12.77□□□□□ -0.37
PTPN7-208ENST00000476061 DPF2Q92785 391 aa12.77□□□□□ -0.37
PTPN7-208ENST00000476061 CWC25Q9NXE8 425 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-208ENST00000476061 PODXL2Q9NZ53 605 aa12.77□□□□□ -0.37
PTPN7-208ENST00000476061 GPSM2P81274 684 aa12.76□□□□□ -0.37
PTPN7-208ENST00000476061 CCDC152Q4G0S7 254 aa12.76□□□□□ -0.37
PTPN7-208ENST00000476061 RTL5Q5HYW3 569 aaPredicted RBP12.76□□□□□ -0.37
PTPN7-208ENST00000476061 TNS4Q8IZW8 715 aa12.76□□□□□ -0.37
PTPN7-208ENST00000476061 TSPYL6Q8N831 410 aa12.76□□□□□ -0.37
PTPN7-208ENST00000476061 ZNF428Q96B54 188 aa12.76□□□□□ -0.37
PTPN7-208ENST00000476061 BCL2L13Q9BXK5 485 aa12.76□□□□□ -0.37
PTPN7-208ENST00000476061 POLLQ9UGP5 575 aa12.76□□□□□ -0.37
PTPN7-208ENST00000476061 RAD17O75943 681 aa12.75□□□□□ -0.37
PTPN7-208ENST00000476061 RPS12P25398 132 aaKnown RBP12.75□□□□□ -0.37
PTPN7-208ENST00000476061 TBC1D16Q8TBP0 767 aa12.75□□□□□ -0.37
PTPN7-208ENST00000476061 STK31Q9BXU1 1019 aa12.75□□□□□ -0.37
PTPN7-208ENST00000476061 WDR33Q9C0J8 1336 aaKnown RBP12.75□□□□□ -0.37
PTPN7-208ENST00000476061 PRDM10Q9NQV6 1147 aa12.75□□□□□ -0.37
PTPN7-208ENST00000476061 WBP1LQ9NX94 342 aa12.75□□□□□ -0.37
PTPN7-208ENST00000476061 CNOT7Q9UIV1 285 aaKnown RBP12.75□□□□□ -0.37
PTPN7-208ENST00000476061 ABT1Q9ULW3 272 aaKnown RBP12.75□□□□□ -0.37
PTPN7-208ENST00000476061 MAP3K2Q9Y2U5 619 aa12.75□□□□□ -0.37
PTPN7-208ENST00000476061 SCN9AQ15858 1988 aa12.74□□□□□ -0.37
PTPN7-208ENST00000476061 C6orf229H3BNL8 230 aa12.74□□□□□ -0.37
PTPN7-208ENST00000476061 H7C1D1 291 aa12.74□□□□□ -0.37
PTPN7-208ENST00000476061 ECE1P42892 770 aa12.74□□□□□ -0.37
PTPN7-208ENST00000476061 NEXNQ0ZGT2 675 aa12.74□□□□□ -0.37
PTPN7-208ENST00000476061 TWISTNBQ3B726 338 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-208ENST00000476061 CST9Q5W186 159 aa12.74□□□□□ -0.37
PTPN7-208ENST00000476061 CDC37L1Q7L3B6 337 aa12.74□□□□□ -0.37
PTPN7-208ENST00000476061 TSR2Q969E8 191 aaKnown RBP12.74□□□□□ -0.37
PTPN7-208ENST00000476061 HHIPL1Q96JK4 782 aa12.74□□□□□ -0.37
PTPN7-208ENST00000476061 TLL2Q9Y6L7 1015 aa12.74□□□□□ -0.37
PTPN7-208ENST00000476061 SPEF2Q9C093 1822 aa12.74□□□□□ -0.37
PTPN7-208ENST00000476061 ZNF609O15014 1411 aa12.73□□□□□ -0.37
PTPN7-208ENST00000476061 POLR2AP24928 1970 aaKnown RBP12.73□□□□□ -0.37
PTPN7-208ENST00000476061 PI4KAP2A4QPH2 592 aa12.73□□□□□ -0.37
PTPN7-208ENST00000476061 RIMBP2O15034 1052 aa12.73□□□□□ -0.37
PTPN7-208ENST00000476061 FOXN1O15353 648 aa12.73□□□□□ -0.37
PTPN7-208ENST00000476061 CTCFP49711 727 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms