RNA–Protein interactions for RNA: ENST00000476034.5

PDE6B-209, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-209ENST00000476034 GRAPLQ8TC17 118 aaPredicted RBP24.48■■□□□ 1.51
PDE6B-209ENST00000476034 JARID2Q92833 1246 aaPredicted RBP24.48■■□□□ 1.51
PDE6B-209ENST00000476034 LRRC37AA6NMS7 1700 aa24.47■■□□□ 1.51
PDE6B-209ENST00000476034 H7C1W4 665 aa24.47■■□□□ 1.51
PDE6B-209ENST00000476034 BBOX1O75936 387 aa24.47■■□□□ 1.51
PDE6B-209ENST00000476034 PRELPP51888 382 aa24.47■■□□□ 1.51
PDE6B-209ENST00000476034 GRIPAP1Q4V328 841 aa24.47■■□□□ 1.51
PDE6B-209ENST00000476034 OLFM4Q6UX06 510 aa24.47■■□□□ 1.51
PDE6B-209ENST00000476034 UBE3BQ7Z3V4 1068 aa24.47■■□□□ 1.51
PDE6B-209ENST00000476034 ZC3H4Q9UPT8 1303 aaKnown RBP24.46■■□□□ 1.51
PDE6B-209ENST00000476034 FKBP4Q02790 459 aaKnown RBP eCLIP24.46■■□□□ 1.51
PDE6B-209ENST00000476034 TMX4Q9H1E5 349 aaPredicted RBP24.46■■□□□ 1.51
PDE6B-209ENST00000476034 CCDC152Q4G0S7 254 aa24.45■■□□□ 1.5
PDE6B-209ENST00000476034 SLC4A10Q6U841 1118 aa24.45■■□□□ 1.5
PDE6B-209ENST00000476034 TMC4Q7Z404 712 aa24.45■■□□□ 1.5
PDE6B-209ENST00000476034 ATP6V0A2Q9Y487 856 aa24.45■■□□□ 1.5
PDE6B-209ENST00000476034 ALDH1L1O75891 902 aa24.44■■□□□ 1.5
PDE6B-209ENST00000476034 BRPF1P55201 1214 aaPredicted RBP24.44■■□□□ 1.5
PDE6B-209ENST00000476034 COL4A1P02462 1669 aa24.43■■□□□ 1.5
PDE6B-209ENST00000476034 RARSP54136 660 aaKnown RBP24.43■■□□□ 1.5
PDE6B-209ENST00000476034 CASP7P55210 303 aa24.43■■□□□ 1.5
PDE6B-209ENST00000476034 CTSWP56202 376 aa24.43■■□□□ 1.5
PDE6B-209ENST00000476034 PSMD1Q99460 953 aa24.43■■□□□ 1.5
PDE6B-209ENST00000476034 SRCIN1Q9C0H9 1055 aa24.43■■□□□ 1.5
PDE6B-209ENST00000476034 SP8Q8IXZ3 490 aa24.42■■□□□ 1.5
PDE6B-209ENST00000476034 CELF1Q92879 486 aaKnown RBP24.41■■□□□ 1.5
PDE6B-209ENST00000476034 PLA2G12BQ9BX93 195 aa24.41■■□□□ 1.5
PDE6B-209ENST00000476034 SLC51AQ86UW1 340 aa24.4■■□□□ 1.5
PDE6B-209ENST00000476034 RTL9Q8NET4 1388 aa24.4■■□□□ 1.5
PDE6B-209ENST00000476034 KIF16BQ96L93 1317 aa24.39■■□□□ 1.5
PDE6B-209ENST00000476034 GRM8O00222 908 aa24.39■■□□□ 1.49
PDE6B-209ENST00000476034 TTLL11Q8NHH1 800 aa24.39■■□□□ 1.49
PDE6B-209ENST00000476034 ZNF526Q8TF50 670 aaPredicted RBP24.39■■□□□ 1.49
PDE6B-209ENST00000476034 GPBP1L1Q9HC44 474 aaPredicted RBP24.39■■□□□ 1.49
PDE6B-209ENST00000476034 ZNF277Q9NRM2 450 aaPredicted RBP24.39■■□□□ 1.49
PDE6B-209ENST00000476034 RPS8P62241 208 aaKnown RBP24.38■■□□□ 1.49
PDE6B-209ENST00000476034 CCDC85AQ96PX6 553 aaPredicted RBP24.38■■□□□ 1.49
PDE6B-209ENST00000476034 SEC31BQ9NQW1 1179 aa24.38■■□□□ 1.49
PDE6B-209ENST00000476034 C9orf78Q9NZ63 289 aaPredicted RBP24.38■■□□□ 1.49
PDE6B-209ENST00000476034 NOB1Q9ULX3 412 aaKnown RBP24.38■■□□□ 1.49
PDE6B-209ENST00000476034 SPEF2Q9C093 1822 aa24.38■■□□□ 1.49
PDE6B-209ENST00000476034 IARSP41252 1262 aaKnown RBP24.37■■□□□ 1.49
PDE6B-209ENST00000476034 LTBP1Q14766 1721 aa24.36■■□□□ 1.49
PDE6B-209ENST00000476034 DPP8Q6V1X1 898 aaPredicted RBP24.36■■□□□ 1.49
PDE6B-209ENST00000476034 MPNDQ8N594 471 aa24.36■■□□□ 1.49
PDE6B-209ENST00000476034 API5Q9BZZ5 524 aaKnown RBP24.36■■□□□ 1.49
PDE6B-209ENST00000476034 KDM2BQ8NHM5 1336 aa24.35■■□□□ 1.49
PDE6B-209ENST00000476034 DUOX1Q9NRD9 1551 aa24.35■■□□□ 1.49
PDE6B-209ENST00000476034 SUPT20HQ8NEM7 779 aa24.35■■□□□ 1.49
PDE6B-209ENST00000476034 CDC5LQ99459 802 aaKnown RBP24.35■■□□□ 1.49
PDE6B-209ENST00000476034 RTFDC1Q9BY42 306 aaPredicted RBP24.35■■□□□ 1.49
PDE6B-209ENST00000476034 GREM2Q9H772 168 aa24.35■■□□□ 1.49
PDE6B-209ENST00000476034 CSF1RP07333 972 aa24.34■■□□□ 1.49
PDE6B-209ENST00000476034 ANKRD18AQ8IVF6 992 aa24.34■■□□□ 1.49
PDE6B-209ENST00000476034 ARHGAP45Q92619 1136 aa24.34■■□□□ 1.49
PDE6B-209ENST00000476034 UTYO14607 1347 aa24.34■■□□□ 1.49
PDE6B-209ENST00000476034 VPS33BQ9H267 617 aa24.33■■□□□ 1.49
PDE6B-209ENST00000476034 GLTPD2A6NH11 291 aa24.32■■□□□ 1.48
PDE6B-209ENST00000476034 CCT4P50991 539 aaKnown RBP24.32■■□□□ 1.48
PDE6B-209ENST00000476034 FOXO4P98177 505 aa24.32■■□□□ 1.48
PDE6B-209ENST00000476034 COL4A5P29400 1685 aa24.31■■□□□ 1.48
PDE6B-209ENST00000476034 FAM161AQ3B820 660 aa24.31■■□□□ 1.48
PDE6B-209ENST00000476034 JDP2Q8WYK2 163 aa24.31■■□□□ 1.48
PDE6B-209ENST00000476034 IPO8O15397 1037 aaKnown RBP24.3■■□□□ 1.48
PDE6B-209ENST00000476034 BCAR3O75815 825 aa24.3■■□□□ 1.48
PDE6B-209ENST00000476034 NBPF7P0C2Y1 421 aaPredicted RBP24.3■■□□□ 1.48
PDE6B-209ENST00000476034 ITGA6P23229 1130 aa24.3■■□□□ 1.48
PDE6B-209ENST00000476034 DPY19L2Q6NUT2 758 aa24.3■■□□□ 1.48
PDE6B-209ENST00000476034 LARGE2Q8N3Y3 721 aa24.3■■□□□ 1.48
PDE6B-209ENST00000476034 NSFL1CQ9UNZ2 370 aaKnown RBP24.3■■□□□ 1.48
PDE6B-209ENST00000476034 WDR90Q96KV7 1748 aa24.3■■□□□ 1.48
PDE6B-209ENST00000476034 PPIP5K2O43314 1243 aa24.29■■□□□ 1.48
PDE6B-209ENST00000476034 GPSM2P81274 684 aa24.29■■□□□ 1.48
PDE6B-209ENST00000476034 IGHMBP2P38935 993 aaKnown RBP24.28■■□□□ 1.48
PDE6B-209ENST00000476034 EPHA10Q5JZY3 1008 aa24.28■■□□□ 1.48
PDE6B-209ENST00000476034 NMRK2Q9NPI5 230 aa24.28■■□□□ 1.48
PDE6B-209ENST00000476034 BSDC1Q9NW68 430 aaPredicted RBP24.28■■□□□ 1.48
PDE6B-209ENST00000476034 ANKRD18BA2A2Z9 1011 aa24.27■■□□□ 1.48
PDE6B-209ENST00000476034 FZD9O00144 591 aa24.27■■□□□ 1.48
PDE6B-209ENST00000476034 AOC3Q16853 763 aa24.27■■□□□ 1.48
PDE6B-209ENST00000476034 LMBR1LQ6UX01 489 aa24.27■■□□□ 1.48
PDE6B-209ENST00000476034 FRAT1Q92837 279 aaPredicted RBP24.27■■□□□ 1.48
PDE6B-209ENST00000476034 SUCLG2Q96I99 432 aa24.27■■□□□ 1.48
PDE6B-209ENST00000476034 USP44Q9H0E7 712 aa24.27■■□□□ 1.48
PDE6B-209ENST00000476034 PODXL2Q9NZ53 605 aa24.27■■□□□ 1.48
PDE6B-209ENST00000476034 CHMP3Q9Y3E7 222 aa24.27■■□□□ 1.48
PDE6B-209ENST00000476034 KIAA2012Q0VF49 1180 aa24.26■■□□□ 1.47
PDE6B-209ENST00000476034 IFIT5Q13325 482 aaKnown RBP24.26■■□□□ 1.47
PDE6B-209ENST00000476034 ATF7IPQ6VMQ6 1270 aa24.26■■□□□ 1.47
PDE6B-209ENST00000476034 NIM1KQ8IY84 436 aa24.26■■□□□ 1.47
PDE6B-209ENST00000476034 ANKIB1Q9P2G1 1089 aa24.26■■□□□ 1.47
PDE6B-209ENST00000476034 KIF3CO14782 793 aa24.25■■□□□ 1.47
PDE6B-209ENST00000476034 KAZALD1Q96I82 304 aa24.25■■□□□ 1.47
PDE6B-209ENST00000476034 XDHP47989 1333 aa24.25■■□□□ 1.47
PDE6B-209ENST00000476034 ZNF541Q9H0D2 1346 aa24.25■■□□□ 1.47
PDE6B-209ENST00000476034 C6orf229H3BNL8 230 aa24.24■■□□□ 1.47
PDE6B-209ENST00000476034 TRIM27P14373 513 aa24.24■■□□□ 1.47
PDE6B-209ENST00000476034 TBC1D16Q8TBP0 767 aa24.24■■□□□ 1.47
PDE6B-209ENST00000476034 EYA3Q99504 573 aa24.24■■□□□ 1.47
PDE6B-209ENST00000476034 MPHOSPH8Q99549 860 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms