RNA–Protein interactions for RNA: ENST00000476018.2

VSTM4-203, Transcript of V-set and transmembrane domain containing 4, humanhuman

TSL 5

Gene VSTM4, Length 659 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-203ENST00000476018 ABCC4O15439 1325 aa16.85■□□□□ 0.29
VSTM4-203ENST00000476018 BBOX1O75936 387 aa16.84■□□□□ 0.29
VSTM4-203ENST00000476018 TCIRG1Q13488 830 aa16.84■□□□□ 0.29
VSTM4-203ENST00000476018 NLRP10Q86W26 655 aa16.84■□□□□ 0.29
VSTM4-203ENST00000476018 TRMT112Q9UI30 125 aaKnown RBP16.84■□□□□ 0.29
VSTM4-203ENST00000476018 COL4A5P29400 1685 aa16.84■□□□□ 0.29
VSTM4-203ENST00000476018 HDGFL1Q5TGJ6 251 aa16.83■□□□□ 0.28
VSTM4-203ENST00000476018 MAP1SQ66K74 1059 aaPredicted RBP16.83■□□□□ 0.28
VSTM4-203ENST00000476018 DDX46Q7L014 1031 aaKnown RBP16.83■□□□□ 0.28
VSTM4-203ENST00000476018 SH3TC1Q8TE82 1336 aa16.83■□□□□ 0.28
VSTM4-203ENST00000476018 LAS1LQ9Y4W2 734 aaKnown RBP16.83■□□□□ 0.28
VSTM4-203ENST00000476018 SCNN1DP51172 638 aa16.82■□□□□ 0.28
VSTM4-203ENST00000476018 DPP8Q6V1X1 898 aaPredicted RBP16.82■□□□□ 0.28
VSTM4-203ENST00000476018 USP50Q70EL3 339 aaPredicted RBP16.82■□□□□ 0.28
VSTM4-203ENST00000476018 AIDAQ96BJ3 306 aa16.82■□□□□ 0.28
VSTM4-203ENST00000476018 RTFDC1Q9BY42 306 aaPredicted RBP16.82■□□□□ 0.28
VSTM4-203ENST00000476018 TRIM35Q9UPQ4 493 aa16.82■□□□□ 0.28
VSTM4-203ENST00000476018 AOC3Q16853 763 aa16.81■□□□□ 0.28
VSTM4-203ENST00000476018 TMC4Q7Z404 712 aa16.81■□□□□ 0.28
VSTM4-203ENST00000476018 SP8Q8IXZ3 490 aa16.81■□□□□ 0.28
VSTM4-203ENST00000476018 CHPF2Q9P2E5 772 aa16.81■□□□□ 0.28
VSTM4-203ENST00000476018 DBF4Q9UBU7 674 aaPredicted RBP16.81■□□□□ 0.28
VSTM4-203ENST00000476018 LAMB2P55268 1798 aa16.8■□□□□ 0.28
VSTM4-203ENST00000476018 LTBP1Q14766 1721 aa16.8■□□□□ 0.28
VSTM4-203ENST00000476018 RASSF10A6NK89 507 aa16.8■□□□□ 0.28
VSTM4-203ENST00000476018 HCLS1P14317 486 aaPredicted RBP16.8■□□□□ 0.28
VSTM4-203ENST00000476018 VEGFBP49765 207 aa16.8■□□□□ 0.28
VSTM4-203ENST00000476018 GRAPQ13588 217 aa16.8■□□□□ 0.28
VSTM4-203ENST00000476018 MPNDQ8N594 471 aa16.8■□□□□ 0.28
VSTM4-203ENST00000476018 PLBD2Q8NHP8 589 aa16.8■□□□□ 0.28
VSTM4-203ENST00000476018 GRAPLQ8TC17 118 aaPredicted RBP16.8■□□□□ 0.28
VSTM4-203ENST00000476018 ZNRF3Q9ULT6 936 aa16.8■□□□□ 0.28
VSTM4-203ENST00000476018 CDHR2Q9BYE9 1310 aa16.79■□□□□ 0.28
VSTM4-203ENST00000476018 EPS15P42566 896 aa16.79■□□□□ 0.28
VSTM4-203ENST00000476018 KRT24Q2M2I5 525 aa16.79■□□□□ 0.28
VSTM4-203ENST00000476018 DEFB115Q30KQ5 88 aa16.79■□□□□ 0.28
VSTM4-203ENST00000476018 ANKRD13DQ6ZTN6 518 aa16.79■□□□□ 0.28
VSTM4-203ENST00000476018 CFAP44Q96MT7 982 aa16.79■□□□□ 0.28
VSTM4-203ENST00000476018 ADARB2Q9NS39 739 aaKnown RBP16.79■□□□□ 0.28
VSTM4-203ENST00000476018 ABT1Q9ULW3 272 aaKnown RBP16.79■□□□□ 0.28
VSTM4-203ENST00000476018 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
VSTM4-203ENST00000476018 KIAA2012Q0VF49 1180 aa16.78■□□□□ 0.28
VSTM4-203ENST00000476018 SLC51AQ86UW1 340 aa16.78■□□□□ 0.28
VSTM4-203ENST00000476018 HYPKQ9NX55 129 aa16.78■□□□□ 0.28
VSTM4-203ENST00000476018 CTCFP49711 727 aaPredicted RBP16.77■□□□□ 0.28
VSTM4-203ENST00000476018 CALD1Q05682 793 aaKnown RBP16.77■□□□□ 0.28
VSTM4-203ENST00000476018 GPRC5DQ9NZD1 345 aa16.77■□□□□ 0.28
VSTM4-203ENST00000476018 FOXN1O15353 648 aa16.76■□□□□ 0.27
VSTM4-203ENST00000476018 CXCL9Q07325 125 aa16.76■□□□□ 0.27
VSTM4-203ENST00000476018 TNIP1Q15025 636 aa16.76■□□□□ 0.27
VSTM4-203ENST00000476018 DUSP27Q5VZP5 1158 aa16.76■□□□□ 0.27
VSTM4-203ENST00000476018 CIAPIN1Q6FI81 312 aa16.76■□□□□ 0.27
VSTM4-203ENST00000476018 ISCA1Q9BUE6 129 aa16.76■□□□□ 0.27
VSTM4-203ENST00000476018 PRDM10Q9NQV6 1147 aa16.76■□□□□ 0.27
VSTM4-203ENST00000476018 HSP90B1P14625 803 aaKnown RBP16.75■□□□□ 0.27
VSTM4-203ENST00000476018 PRKRIP1Q9H875 184 aaPredicted RBP16.75■□□□□ 0.27
VSTM4-203ENST00000476018 LRRC37AA6NMS7 1700 aa16.75■□□□□ 0.27
VSTM4-203ENST00000476018 WDR33Q9C0J8 1336 aaKnown RBP16.74■□□□□ 0.27
VSTM4-203ENST00000476018 DDX60Q8IY21 1712 aaKnown RBP16.74■□□□□ 0.27
VSTM4-203ENST00000476018 ECE1P42892 770 aa16.74■□□□□ 0.27
VSTM4-203ENST00000476018 GMPSP49915 693 aaPredicted RBP16.74■□□□□ 0.27
VSTM4-203ENST00000476018 MAP2K1Q02750 393 aaPredicted RBP16.74■□□□□ 0.27
VSTM4-203ENST00000476018 SF3B3Q15393 1217 aaKnown RBP16.74■□□□□ 0.27
VSTM4-203ENST00000476018 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
VSTM4-203ENST00000476018 CHMP4AQ9BY43 222 aa16.74■□□□□ 0.27
VSTM4-203ENST00000476018 MBIPQ9NS73 344 aa16.74■□□□□ 0.27
VSTM4-203ENST00000476018 IFT57Q9NWB7 429 aa16.74■□□□□ 0.27
VSTM4-203ENST00000476018 WBP1LQ9NX94 342 aa16.74■□□□□ 0.27
VSTM4-203ENST00000476018 GNAI1P63096 354 aa16.73■□□□□ 0.27
VSTM4-203ENST00000476018 GOLGA2Q08379 1002 aa16.73■□□□□ 0.27
VSTM4-203ENST00000476018 TRIM28Q13263 835 aaKnown RBP16.73■□□□□ 0.27
VSTM4-203ENST00000476018 FAM89AQ96GI7 184 aa16.73■□□□□ 0.27
VSTM4-203ENST00000476018 TRPM7Q96QT4 1865 aa16.73■□□□□ 0.27
VSTM4-203ENST00000476018 ATP5J2-PTCD1G3V325 749 aa16.72■□□□□ 0.27
VSTM4-203ENST00000476018 HAX1O00165 279 aa16.72■□□□□ 0.27
VSTM4-203ENST00000476018 ZNF853P0CG23 659 aa16.72■□□□□ 0.27
VSTM4-203ENST00000476018 PAXIP1Q6ZW49 1069 aaPredicted RBP16.72■□□□□ 0.27
VSTM4-203ENST00000476018 RIC3Q7Z5B4 369 aa16.72■□□□□ 0.27
VSTM4-203ENST00000476018 ZC3H15Q8WU90 426 aaKnown RBP16.72■□□□□ 0.27
VSTM4-203ENST00000476018 DUOX1Q9NRD9 1551 aa16.72■□□□□ 0.27
VSTM4-203ENST00000476018 IRS4O14654 1257 aaPredicted RBP16.71■□□□□ 0.27
VSTM4-203ENST00000476018 RAD17O75943 681 aa16.71■□□□□ 0.27
VSTM4-203ENST00000476018 WASHC4Q2M389 1173 aa16.71■□□□□ 0.27
VSTM4-203ENST00000476018 NSFL1CQ9UNZ2 370 aaKnown RBP16.71■□□□□ 0.27
VSTM4-203ENST00000476018 TLL2Q9Y6L7 1015 aa16.71■□□□□ 0.27
VSTM4-203ENST00000476018 THSD7BQ9C0I4 1608 aa16.7■□□□□ 0.26
VSTM4-203ENST00000476018 TAF1P21675 1872 aa16.7■□□□□ 0.26
VSTM4-203ENST00000476018 TRAF5O00463 557 aa16.7■□□□□ 0.26
VSTM4-203ENST00000476018 APAF1O14727 1248 aa16.7■□□□□ 0.26
VSTM4-203ENST00000476018 CELF1Q92879 486 aaKnown RBP16.7■□□□□ 0.26
VSTM4-203ENST00000476018 ZNF428Q96B54 188 aa16.7■□□□□ 0.26
VSTM4-203ENST00000476018 CAPNS2Q96L46 248 aa16.7■□□□□ 0.26
VSTM4-203ENST00000476018 EYA3Q99504 573 aa16.7■□□□□ 0.26
VSTM4-203ENST00000476018 BEGAINQ9BUH8 593 aa16.7■□□□□ 0.26
VSTM4-203ENST00000476018 H7C1D1 291 aa16.69■□□□□ 0.26
VSTM4-203ENST00000476018 PRKAR2AP13861 404 aaKnown RBP16.69■□□□□ 0.26
VSTM4-203ENST00000476018 CST9Q5W186 159 aa16.69■□□□□ 0.26
VSTM4-203ENST00000476018 ZBTB38Q8NAP3 1195 aaPredicted RBP16.69■□□□□ 0.26
VSTM4-203ENST00000476018 PGAP2Q9UHJ9 254 aa16.69■□□□□ 0.26
VSTM4-203ENST00000476018 YDJCA8MPS7 323 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms