RNA–Protein interactions for RNA: ENST00000475988.1

PKP1-204, Transcript of plakophilin 1, humanhuman

TSL 3

Gene PKP1, Length 931 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-204ENST00000475988 ECHDC1Q9NTX5 307 aa16.49■□□□□ 0.23
PKP1-204ENST00000475988 TRMT112Q9UI30 125 aaKnown RBP16.49■□□□□ 0.23
PKP1-204ENST00000475988 SH3TC1Q8TE82 1336 aa16.48■□□□□ 0.23
PKP1-204ENST00000475988 GLRX3O76003 335 aaKnown RBP16.48■□□□□ 0.23
PKP1-204ENST00000475988 RBM25P49756 843 aaKnown RBP16.48■□□□□ 0.23
PKP1-204ENST00000475988 TNNI3KQ59H18 835 aa16.48■□□□□ 0.23
PKP1-204ENST00000475988 AMIGO3Q86WK7 504 aa16.48■□□□□ 0.23
PKP1-204ENST00000475988 UTP14AQ9BVJ6 771 aaKnown RBP16.48■□□□□ 0.23
PKP1-204ENST00000475988 FPGT-TNNI3KV9GXZ4 949 aa16.48■□□□□ 0.23
PKP1-204ENST00000475988 RIC1Q4ADV7 1423 aa16.47■□□□□ 0.23
PKP1-204ENST00000475988 GNPATO15228 680 aa16.47■□□□□ 0.23
PKP1-204ENST00000475988 IFIT2P09913 472 aaKnown RBP16.47■□□□□ 0.23
PKP1-204ENST00000475988 MFAP1P55081 439 aaKnown RBP16.47■□□□□ 0.23
PKP1-204ENST00000475988 TFCP2Q12800 502 aa16.47■□□□□ 0.23
PKP1-204ENST00000475988 TLR7Q9NYK1 1049 aaKnown RBP16.47■□□□□ 0.23
PKP1-204ENST00000475988 ERC2O15083 957 aa16.46■□□□□ 0.23
PKP1-204ENST00000475988 ADRA2BP18089 450 aa16.46■□□□□ 0.23
PKP1-204ENST00000475988 GPATCH3Q96I76 525 aa16.46■□□□□ 0.23
PKP1-204ENST00000475988 C22orf23Q9BZE7 217 aa16.46■□□□□ 0.23
PKP1-204ENST00000475988 NIP7Q9Y221 180 aaKnown RBP eCLIP16.46■□□□□ 0.23
PKP1-204ENST00000475988 CHMP3Q9Y3E7 222 aa16.46■□□□□ 0.23
PKP1-204ENST00000475988 RTCBQ9Y3I0 505 aaKnown RBP16.46■□□□□ 0.23
PKP1-204ENST00000475988 ARAP2Q8WZ64 1704 aa16.45■□□□□ 0.22
PKP1-204ENST00000475988 MSH5O43196 834 aa16.45■□□□□ 0.22
PKP1-204ENST00000475988 TRIM37O94972 964 aa16.45■□□□□ 0.22
PKP1-204ENST00000475988 RXRBP28702 533 aa16.45■□□□□ 0.22
PKP1-204ENST00000475988 CCDC57Q2TAC2 916 aa16.45■□□□□ 0.22
PKP1-204ENST00000475988 LRRC24Q50LG9 513 aa16.45■□□□□ 0.22
PKP1-204ENST00000475988 DDRGK1Q96HY6 314 aa16.45■□□□□ 0.22
PKP1-204ENST00000475988 ZNF594Q96JF6 807 aaPredicted RBP16.45■□□□□ 0.22
PKP1-204ENST00000475988 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
PKP1-204ENST00000475988 GREM2Q9H772 168 aa16.45■□□□□ 0.22
PKP1-204ENST00000475988 DBNLQ9UJU6 430 aaKnown RBP16.45■□□□□ 0.22
PKP1-204ENST00000475988 HSP90B1P14625 803 aaKnown RBP16.44■□□□□ 0.22
PKP1-204ENST00000475988 CHMLP26374 656 aa16.44■□□□□ 0.22
PKP1-204ENST00000475988 IFIT5Q13325 482 aaKnown RBP16.44■□□□□ 0.22
PKP1-204ENST00000475988 ARHGEF1Q92888 912 aaKnown RBP16.44■□□□□ 0.22
PKP1-204ENST00000475988 PUS3Q9BZE2 481 aaKnown RBP16.44■□□□□ 0.22
PKP1-204ENST00000475988 SPEF2Q9C093 1822 aa16.43■□□□□ 0.22
PKP1-204ENST00000475988 ATP5JP18859 108 aa16.43■□□□□ 0.22
PKP1-204ENST00000475988 ITGA6P23229 1130 aa16.43■□□□□ 0.22
PKP1-204ENST00000475988 HMGB2P26583 209 aaKnown RBP16.43■□□□□ 0.22
PKP1-204ENST00000475988 SLC10A5Q5PT55 438 aa16.43■□□□□ 0.22
PKP1-204ENST00000475988 USPL1Q5W0Q7 1092 aa16.43■□□□□ 0.22
PKP1-204ENST00000475988 CASC1Q6TDU7 716 aa16.43■□□□□ 0.22
PKP1-204ENST00000475988 CCDC8Q9H0W5 538 aaPredicted RBP16.43■□□□□ 0.22
PKP1-204ENST00000475988 RIPOR2Q9Y4F9 1068 aa16.43■□□□□ 0.22
PKP1-204ENST00000475988 A0A1B0GUL6 1792 aa16.43■□□□□ 0.22
PKP1-204ENST00000475988 ANKRD18BA2A2Z9 1011 aa16.42■□□□□ 0.22
PKP1-204ENST00000475988 PLSCR1O15162 318 aa16.42■□□□□ 0.22
PKP1-204ENST00000475988 TBC1D9BQ66K14 1250 aa16.42■□□□□ 0.22
PKP1-204ENST00000475988 SMIM5Q71RC9 77 aa16.42■□□□□ 0.22
PKP1-204ENST00000475988 CNTROBQ8N137 903 aa16.42■□□□□ 0.22
PKP1-204ENST00000475988 PROM2Q8N271 834 aa16.42■□□□□ 0.22
PKP1-204ENST00000475988 ESYT1Q9BSJ8 1104 aa16.42■□□□□ 0.22
PKP1-204ENST00000475988 SRP68Q9UHB9 627 aaKnown RBP16.42■□□□□ 0.22
PKP1-204ENST00000475988 RFX7Q2KHR2 1363 aa16.41■□□□□ 0.22
PKP1-204ENST00000475988 COL4A1P02462 1669 aa16.41■□□□□ 0.22
PKP1-204ENST00000475988 TRIM6-TRIM34B2RNG4 842 aa16.41■□□□□ 0.22
PKP1-204ENST00000475988 VGLL2Q8N8G2 317 aa16.41■□□□□ 0.22
PKP1-204ENST00000475988 DBNDD2Q9BQY9 259 aa16.41■□□□□ 0.22
PKP1-204ENST00000475988 ABCC12Q96J65 1359 aa16.4■□□□□ 0.22
PKP1-204ENST00000475988 EPB41L2O43491 1005 aaKnown RBP16.4■□□□□ 0.22
PKP1-204ENST00000475988 ZPR1O75312 459 aa16.4■□□□□ 0.22
PKP1-204ENST00000475988 HCLS1P14317 486 aaPredicted RBP16.4■□□□□ 0.22
PKP1-204ENST00000475988 SSFA2P28290 1259 aa16.4■□□□□ 0.22
PKP1-204ENST00000475988 SF3B3Q15393 1217 aaKnown RBP16.4■□□□□ 0.22
PKP1-204ENST00000475988 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
PKP1-204ENST00000475988 EVI5LQ96CN4 794 aa16.4■□□□□ 0.22
PKP1-204ENST00000475988 KIF2CQ99661 725 aa16.4■□□□□ 0.22
PKP1-204ENST00000475988 USP26Q9BXU7 913 aa16.4■□□□□ 0.22
PKP1-204ENST00000475988 TRAPPC3LQ5T215 181 aa16.39■□□□□ 0.21
PKP1-204ENST00000475988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.39■□□□□ 0.21
PKP1-204ENST00000475988 RILPL2Q969X0 211 aa16.39■□□□□ 0.21
PKP1-204ENST00000475988 CEP126Q9P2H0 1117 aa16.39■□□□□ 0.21
PKP1-204ENST00000475988 TNRC6CQ9HCJ0 1690 aaKnown RBP16.39■□□□□ 0.21
PKP1-204ENST00000475988 REC8O95072 547 aa16.38■□□□□ 0.21
PKP1-204ENST00000475988 ERFEQ4G0M1 354 aa16.38■□□□□ 0.21
PKP1-204ENST00000475988 CCDC152Q4G0S7 254 aa16.38■□□□□ 0.21
PKP1-204ENST00000475988 TICAM2Q86XR7 235 aa16.38■□□□□ 0.21
PKP1-204ENST00000475988 IL17RAQ96F46 866 aa16.38■□□□□ 0.21
PKP1-204ENST00000475988 CCDC85AQ96PX6 553 aaPredicted RBP16.38■□□□□ 0.21
PKP1-204ENST00000475988 NYXQ9GZU5 481 aa16.38■□□□□ 0.21
PKP1-204ENST00000475988 AKAP2Q9Y2D5 859 aa16.38■□□□□ 0.21
PKP1-204ENST00000475988 A0A1B0GUL7 405 aa16.37■□□□□ 0.21
PKP1-204ENST00000475988 MAP4K4O95819 1239 aaPredicted RBP16.37■□□□□ 0.21
PKP1-204ENST00000475988 TAF7LQ5H9L4 462 aa16.37■□□□□ 0.21
PKP1-204ENST00000475988 LDHAL6AQ6ZMR3 332 aa16.37■□□□□ 0.21
PKP1-204ENST00000475988 HAUS7Q99871 368 aa16.37■□□□□ 0.21
PKP1-204ENST00000475988 SNRKQ9NRH2 765 aa16.37■□□□□ 0.21
PKP1-204ENST00000475988 MROH5Q6ZUA9 1318 aa16.37■□□□□ 0.21
PKP1-204ENST00000475988 CARMIL3Q8ND23 1372 aa16.37■□□□□ 0.21
PKP1-204ENST00000475988 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.36■□□□□ 0.21
PKP1-204ENST00000475988 FAM177BA6PVY3 158 aa16.36■□□□□ 0.21
PKP1-204ENST00000475988 SGSM2O43147 1006 aa16.36■□□□□ 0.21
PKP1-204ENST00000475988 RFC4P35249 363 aa16.36■□□□□ 0.21
PKP1-204ENST00000475988 C3orf67Q6ZVT6 689 aa16.36■□□□□ 0.21
PKP1-204ENST00000475988 AKT1S1Q96B36 256 aa16.36■□□□□ 0.21
PKP1-204ENST00000475988 SETDB2Q96T68 719 aa16.36■□□□□ 0.21
PKP1-204ENST00000475988 IL25Q9H293 177 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms