RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 VPS33BQ9H267 617 aa19.98■□□□□ 0.79
CPSF3-203ENST00000475482 DDX58O95786 925 aaKnown RBP19.97■□□□□ 0.79
CPSF3-203ENST00000475482 KSR2Q6VAB6 950 aa19.97■□□□□ 0.79
CPSF3-203ENST00000475482 ZNF428Q96B54 188 aa19.97■□□□□ 0.79
CPSF3-203ENST00000475482 MYD88Q99836 296 aa19.97■□□□□ 0.79
CPSF3-203ENST00000475482 MYH16Q9H6N6 1097 aa19.97■□□□□ 0.79
CPSF3-203ENST00000475482 SPINK5Q9NQ38 1064 aaPredicted RBP19.97■□□□□ 0.79
CPSF3-203ENST00000475482 IRS4O14654 1257 aaPredicted RBP19.96■□□□□ 0.79
CPSF3-203ENST00000475482 VAMP4O75379 141 aa19.96■□□□□ 0.79
CPSF3-203ENST00000475482 PCCAP05165 728 aaPredicted RBP19.96■□□□□ 0.79
CPSF3-203ENST00000475482 TMC4Q7Z404 712 aa19.96■□□□□ 0.79
CPSF3-203ENST00000475482 CDCA7LQ96GN5 454 aa19.96■□□□□ 0.79
CPSF3-203ENST00000475482 STK31Q9BXU1 1019 aa19.96■□□□□ 0.79
CPSF3-203ENST00000475482 COL4A1P02462 1669 aa19.96■□□□□ 0.79
CPSF3-203ENST00000475482 PI4KAP2A4QPH2 592 aa19.95■□□□□ 0.78
CPSF3-203ENST00000475482 TCERG1O14776 1098 aaKnown RBP19.95■□□□□ 0.78
CPSF3-203ENST00000475482 DNAJC5GQ8N7S2 189 aa19.95■□□□□ 0.78
CPSF3-203ENST00000475482 PI4KAP1Q8N8J0 262 aa19.95■□□□□ 0.78
CPSF3-203ENST00000475482 JDP2Q8WYK2 163 aa19.95■□□□□ 0.78
CPSF3-203ENST00000475482 MAP3K2Q9Y2U5 619 aa19.95■□□□□ 0.78
CPSF3-203ENST00000475482 SLC4A2P04920 1241 aa19.94■□□□□ 0.78
CPSF3-203ENST00000475482 IGKV5-2P06315 115 aa19.94■□□□□ 0.78
CPSF3-203ENST00000475482 NEFLP07196 543 aa19.94■□□□□ 0.78
CPSF3-203ENST00000475482 G2E3Q7L622 706 aa19.94■□□□□ 0.78
CPSF3-203ENST00000475482 CWC25Q9NXE8 425 aaPredicted RBP19.94■□□□□ 0.78
CPSF3-203ENST00000475482 DUOX1Q9NRD9 1551 aa19.93■□□□□ 0.78
CPSF3-203ENST00000475482 IQCA1LA6NCM1 817 aa19.93■□□□□ 0.78
CPSF3-203ENST00000475482 RTL5Q5HYW3 569 aaPredicted RBP19.93■□□□□ 0.78
CPSF3-203ENST00000475482 TRMT2AQ8IZ69 625 aaKnown RBP19.93■□□□□ 0.78
CPSF3-203ENST00000475482 GPC2Q8N158 579 aa19.93■□□□□ 0.78
CPSF3-203ENST00000475482 CELF1Q92879 486 aaKnown RBP19.93■□□□□ 0.78
CPSF3-203ENST00000475482 TMX4Q9H1E5 349 aaPredicted RBP19.93■□□□□ 0.78
CPSF3-203ENST00000475482 HSP90B1P14625 803 aaKnown RBP19.92■□□□□ 0.78
CPSF3-203ENST00000475482 EXOSC9Q06265 439 aaKnown RBP19.92■□□□□ 0.78
CPSF3-203ENST00000475482 LARGE2Q8N3Y3 721 aa19.92■□□□□ 0.78
CPSF3-203ENST00000475482 MPNDQ8N594 471 aa19.92■□□□□ 0.78
CPSF3-203ENST00000475482 SUPT20HQ8NEM7 779 aa19.92■□□□□ 0.78
CPSF3-203ENST00000475482 TAF1DQ9H5J8 278 aaPredicted RBP19.92■□□□□ 0.78
CPSF3-203ENST00000475482 LTBP1Q14766 1721 aa19.92■□□□□ 0.78
CPSF3-203ENST00000475482 CDHR2Q9BYE9 1310 aa19.92■□□□□ 0.78
CPSF3-203ENST00000475482 ADAMTSL1Q8N6G6 1762 aa19.92■□□□□ 0.78
CPSF3-203ENST00000475482 DPP8Q6V1X1 898 aaPredicted RBP19.91■□□□□ 0.78
CPSF3-203ENST00000475482 MYH3P11055 1940 aa19.9■□□□□ 0.78
CPSF3-203ENST00000475482 PPIP5K2O43314 1243 aa19.9■□□□□ 0.78
CPSF3-203ENST00000475482 POTEIP0CG38 1075 aa19.9■□□□□ 0.78
CPSF3-203ENST00000475482 POTEJP0CG39 1038 aa19.9■□□□□ 0.78
CPSF3-203ENST00000475482 FLIIQ13045 1269 aa19.9■□□□□ 0.78
CPSF3-203ENST00000475482 AOC3Q16853 763 aa19.9■□□□□ 0.78
CPSF3-203ENST00000475482 NEURL1BA8MQ27 555 aa19.89■□□□□ 0.77
CPSF3-203ENST00000475482 PDE8AO60658 829 aa19.89■□□□□ 0.77
CPSF3-203ENST00000475482 EIF6P56537 245 aaKnown RBP19.89■□□□□ 0.77
CPSF3-203ENST00000475482 RPS8P62241 208 aaKnown RBP19.89■□□□□ 0.77
CPSF3-203ENST00000475482 KIAA2012Q0VF49 1180 aa19.89■□□□□ 0.77
CPSF3-203ENST00000475482 CHADLQ6NUI6 762 aa19.89■□□□□ 0.77
CPSF3-203ENST00000475482 HACL1Q9UJ83 578 aa19.89■□□□□ 0.77
CPSF3-203ENST00000475482 RCAN3Q9UKA8 241 aa19.89■□□□□ 0.77
CPSF3-203ENST00000475482 NEXNQ0ZGT2 675 aa19.88■□□□□ 0.77
CPSF3-203ENST00000475482 LDHDQ86WU2 507 aa19.88■□□□□ 0.77
CPSF3-203ENST00000475482 NIM1KQ8IY84 436 aa19.88■□□□□ 0.77
CPSF3-203ENST00000475482 SUPT16HQ9Y5B9 1047 aaKnown RBP19.88■□□□□ 0.77
CPSF3-203ENST00000475482 CWF19L2Q2TBE0 894 aaKnown RBP19.87■□□□□ 0.77
CPSF3-203ENST00000475482 JARID2Q92833 1246 aaPredicted RBP19.87■□□□□ 0.77
CPSF3-203ENST00000475482 SEC31BQ9NQW1 1179 aa19.87■□□□□ 0.77
CPSF3-203ENST00000475482 ZNRF3Q9ULT6 936 aa19.87■□□□□ 0.77
CPSF3-203ENST00000475482 H7C1W4 665 aa19.86■□□□□ 0.77
CPSF3-203ENST00000475482 EPHX2P34913 555 aa19.86■□□□□ 0.77
CPSF3-203ENST00000475482 SCNN1DP51172 638 aa19.86■□□□□ 0.77
CPSF3-203ENST00000475482 HTRA3P83110 453 aa19.86■□□□□ 0.77
CPSF3-203ENST00000475482 CCDC152Q4G0S7 254 aa19.86■□□□□ 0.77
CPSF3-203ENST00000475482 DNAAF4Q8WXU2 420 aa19.86■□□□□ 0.77
CPSF3-203ENST00000475482 CT47B1P0C2W7 299 aaPredicted RBP19.85■□□□□ 0.77
CPSF3-203ENST00000475482 CXCL9Q07325 125 aa19.85■□□□□ 0.77
CPSF3-203ENST00000475482 PNMA8AQ86V59 439 aaPredicted RBP19.85■□□□□ 0.77
CPSF3-203ENST00000475482 PODXL2Q9NZ53 605 aa19.85■□□□□ 0.77
CPSF3-203ENST00000475482 POLLQ9UGP5 575 aa19.85■□□□□ 0.77
CPSF3-203ENST00000475482 GTF3C3Q9Y5Q9 886 aa19.85■□□□□ 0.77
CPSF3-203ENST00000475482 PASKQ96RG2 1323 aa19.84■□□□□ 0.77
CPSF3-203ENST00000475482 CASP7P55210 303 aa19.84■□□□□ 0.77
CPSF3-203ENST00000475482 GPSM2P81274 684 aa19.84■□□□□ 0.77
CPSF3-203ENST00000475482 FKBP5Q13451 457 aaPredicted RBP19.84■□□□□ 0.77
CPSF3-203ENST00000475482 GCKRQ14397 625 aa19.84■□□□□ 0.77
CPSF3-203ENST00000475482 LINS1Q8NG48 757 aa19.84■□□□□ 0.77
CPSF3-203ENST00000475482 PLA2G12BQ9BX93 195 aa19.84■□□□□ 0.77
CPSF3-203ENST00000475482 NSFL1CQ9UNZ2 370 aaKnown RBP19.84■□□□□ 0.77
CPSF3-203ENST00000475482 GJA3Q9Y6H8 435 aa19.84■□□□□ 0.77
CPSF3-203ENST00000475482 RTL9Q8NET4 1388 aa19.83■□□□□ 0.77
CPSF3-203ENST00000475482 CTSWP56202 376 aa19.83■□□□□ 0.77
CPSF3-203ENST00000475482 TTLL11Q8NHH1 800 aa19.83■□□□□ 0.77
CPSF3-203ENST00000475482 KLRG1Q96E93 195 aa19.83■□□□□ 0.77
CPSF3-203ENST00000475482 YDJCA8MPS7 323 aa19.82■□□□□ 0.76
CPSF3-203ENST00000475482 ITGBL1O95965 494 aaPredicted RBP19.82■□□□□ 0.76
CPSF3-203ENST00000475482 EPS15P42566 896 aa19.81■□□□□ 0.76
CPSF3-203ENST00000475482 WASHC4Q2M389 1173 aa19.81■□□□□ 0.76
CPSF3-203ENST00000475482 JMYQ8N9B5 988 aa19.81■□□□□ 0.76
CPSF3-203ENST00000475482 TBC1D16Q8TBP0 767 aa19.81■□□□□ 0.76
CPSF3-203ENST00000475482 BEND3Q5T5X7 828 aa19.8■□□□□ 0.76
CPSF3-203ENST00000475482 CIAPIN1Q6FI81 312 aa19.8■□□□□ 0.76
CPSF3-203ENST00000475482 UBE3BQ7Z3V4 1068 aa19.8■□□□□ 0.76
CPSF3-203ENST00000475482 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.8■□□□□ 0.76
CPSF3-203ENST00000475482 GPRC5DQ9NZD1 345 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms