RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 DDX58O95786 925 aaKnown RBP12.08□□□□□ -0.48
ITGA6-210ENST00000475302 PRIM1P49642 420 aaKnown RBP12.08□□□□□ -0.48
ITGA6-210ENST00000475302 SSH3Q8TE77 659 aa12.08□□□□□ -0.48
ITGA6-210ENST00000475302 KAZALD1Q96I82 304 aa12.08□□□□□ -0.48
ITGA6-210ENST00000475302 TEX13AQ9BXU3 409 aaPredicted RBP12.08□□□□□ -0.48
ITGA6-210ENST00000475302 LRRFIP2Q9Y608 721 aaKnown RBP12.08□□□□□ -0.48
ITGA6-210ENST00000475302 TJP1Q07157 1748 aa12.08□□□□□ -0.48
ITGA6-210ENST00000475302 NUP188Q5SRE5 1749 aa12.08□□□□□ -0.48
ITGA6-210ENST00000475302 PNMA6EA0A0J9YXQ4 647 aa12.07□□□□□ -0.48
ITGA6-210ENST00000475302 ATRNO75882 1429 aa12.07□□□□□ -0.48
ITGA6-210ENST00000475302 A1BGP04217 495 aa12.07□□□□□ -0.48
ITGA6-210ENST00000475302 MYL6BP14649 208 aa12.07□□□□□ -0.48
ITGA6-210ENST00000475302 PIP4K2AP48426 406 aaPredicted RBP12.07□□□□□ -0.48
ITGA6-210ENST00000475302 NBR1Q14596 966 aa12.07□□□□□ -0.48
ITGA6-210ENST00000475302 CWF19L2Q2TBE0 894 aaKnown RBP12.07□□□□□ -0.48
ITGA6-210ENST00000475302 FAM161AQ3B820 660 aa12.07□□□□□ -0.48
ITGA6-210ENST00000475302 DNAJC10Q8IXB1 793 aa12.07□□□□□ -0.48
ITGA6-210ENST00000475302 PLBD2Q8NHP8 589 aa12.07□□□□□ -0.48
ITGA6-210ENST00000475302 ARHGEF1Q92888 912 aaKnown RBP12.07□□□□□ -0.48
ITGA6-210ENST00000475302 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
ITGA6-210ENST00000475302 EPAS1Q99814 870 aa12.07□□□□□ -0.48
ITGA6-210ENST00000475302 USP21Q9UK80 565 aa12.07□□□□□ -0.48
ITGA6-210ENST00000475302 ARFGEF2Q9Y6D5 1785 aa12.07□□□□□ -0.48
ITGA6-210ENST00000475302 COL15A1P39059 1388 aa12.06□□□□□ -0.48
ITGA6-210ENST00000475302 GRXCR2A6NFK2 248 aa12.06□□□□□ -0.48
ITGA6-210ENST00000475302 NEURL1BA8MQ27 555 aa12.06□□□□□ -0.48
ITGA6-210ENST00000475302 UBTFL1P0CB47 393 aaPredicted RBP12.06□□□□□ -0.48
ITGA6-210ENST00000475302 CYP19A1P11511 503 aaPredicted RBP12.06□□□□□ -0.48
ITGA6-210ENST00000475302 AIMP1Q12904 312 aaKnown RBP12.06□□□□□ -0.48
ITGA6-210ENST00000475302 RREB1Q92766 1687 aa12.06□□□□□ -0.48
ITGA6-210ENST00000475302 COL9A1P20849 921 aa12.05□□□□□ -0.48
ITGA6-210ENST00000475302 CASP7P55210 303 aa12.05□□□□□ -0.48
ITGA6-210ENST00000475302 GCKRQ14397 625 aa12.05□□□□□ -0.48
ITGA6-210ENST00000475302 FAM98CQ17RN3 349 aaKnown RBP12.05□□□□□ -0.48
ITGA6-210ENST00000475302 ANKRD45Q5TZF3 282 aa12.05□□□□□ -0.48
ITGA6-210ENST00000475302 TTLL7Q6ZT98 887 aa12.05□□□□□ -0.48
ITGA6-210ENST00000475302 LNPKQ9C0E8 428 aa12.05□□□□□ -0.48
ITGA6-210ENST00000475302 ZNF831Q5JPB2 1677 aa12.05□□□□□ -0.48
ITGA6-210ENST00000475302 TK2O00142 265 aa12.04□□□□□ -0.48
ITGA6-210ENST00000475302 GRM8O00222 908 aa12.04□□□□□ -0.48
ITGA6-210ENST00000475302 HMMRO75330 724 aa12.04□□□□□ -0.48
ITGA6-210ENST00000475302 PPP1R42Q7Z4L9 355 aa12.04□□□□□ -0.48
ITGA6-210ENST00000475302 RIC3Q7Z5B4 369 aa12.04□□□□□ -0.48
ITGA6-210ENST00000475302 GJD4Q96KN9 370 aaPredicted RBP12.04□□□□□ -0.48
ITGA6-210ENST00000475302 NOP58Q9Y2X3 529 aaKnown RBP12.04□□□□□ -0.48
ITGA6-210ENST00000475302 SALL3Q9BXA9 1300 aa12.04□□□□□ -0.48
ITGA6-210ENST00000475302 PLEKHM2Q8IWE5 1019 aa12.03□□□□□ -0.48
ITGA6-210ENST00000475302 ZBED2Q9BTP6 218 aa12.03□□□□□ -0.48
ITGA6-210ENST00000475302 VPS9D1Q9Y2B5 631 aa12.03□□□□□ -0.48
ITGA6-210ENST00000475302 CCDC9Q9Y3X0 531 aaKnown RBP12.03□□□□□ -0.48
ITGA6-210ENST00000475302 H7C1W4 665 aa12.02□□□□□ -0.49
ITGA6-210ENST00000475302 KCNQ2O43526 872 aa12.02□□□□□ -0.49
ITGA6-210ENST00000475302 HRO43593 1189 aa12.02□□□□□ -0.49
ITGA6-210ENST00000475302 TRIM28Q13263 835 aaKnown RBP12.02□□□□□ -0.49
ITGA6-210ENST00000475302 C6orf132Q5T0Z8 1188 aa12.02□□□□□ -0.49
ITGA6-210ENST00000475302 C16orf71Q8IYS4 520 aaPredicted RBP12.02□□□□□ -0.49
ITGA6-210ENST00000475302 SUCLG2Q96I99 432 aa12.02□□□□□ -0.49
ITGA6-210ENST00000475302 MYD88Q99836 296 aa12.02□□□□□ -0.49
ITGA6-210ENST00000475302 ISCA1Q9BUE6 129 aa12.02□□□□□ -0.49
ITGA6-210ENST00000475302 AFF2P51816 1311 aa12.02□□□□□ -0.49
ITGA6-210ENST00000475302 STARD3NLO95772 234 aa12.01□□□□□ -0.49
ITGA6-210ENST00000475302 EN1Q05925 392 aaPredicted RBP12.01□□□□□ -0.49
ITGA6-210ENST00000475302 ITPK1Q13572 414 aa12.01□□□□□ -0.49
ITGA6-210ENST00000475302 TSR1Q2NL82 804 aaKnown RBP12.01□□□□□ -0.49
ITGA6-210ENST00000475302 RABL6Q3YEC7 729 aaPredicted RBP12.01□□□□□ -0.49
ITGA6-210ENST00000475302 BMP2KLQ5H9B9 411 aa12.01□□□□□ -0.49
ITGA6-210ENST00000475302 EPHA10Q5JZY3 1008 aa12.01□□□□□ -0.49
ITGA6-210ENST00000475302 INTS5Q6P9B9 1019 aaKnown RBP12.01□□□□□ -0.49
ITGA6-210ENST00000475302 OTUD7AQ8TE49 926 aaPredicted RBP12.01□□□□□ -0.49
ITGA6-210ENST00000475302 RNF166Q96A37 237 aaPredicted RBP12.01□□□□□ -0.49
ITGA6-210ENST00000475302 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
ITGA6-210ENST00000475302 OSBPL3Q9H4L5 887 aa12.01□□□□□ -0.49
ITGA6-210ENST00000475302 PPP1R3GB7ZBB8 358 aa12□□□□□ -0.49
ITGA6-210ENST00000475302 MLLT3P42568 568 aaPredicted RBP12□□□□□ -0.49
ITGA6-210ENST00000475302 NEXNQ0ZGT2 675 aa12□□□□□ -0.49
ITGA6-210ENST00000475302 PTF1AQ7RTS3 328 aa12□□□□□ -0.49
ITGA6-210ENST00000475302 C9orf78Q9NZ63 289 aaPredicted RBP12□□□□□ -0.49
ITGA6-210ENST00000475302 HDAC5Q9UQL6 1122 aa12□□□□□ -0.49
ITGA6-210ENST00000475302 EXOC6BQ9Y2D4 811 aa12□□□□□ -0.49
ITGA6-210ENST00000475302 LOC102724428A0A0B4J2F2 783 aa11.99□□□□□ -0.49
ITGA6-210ENST00000475302 SRGAP3O43295 1099 aa11.99□□□□□ -0.49
ITGA6-210ENST00000475302 MAP3K7O43318 606 aa11.99□□□□□ -0.49
ITGA6-210ENST00000475302 SMARCA5O60264 1052 aaPredicted RBP11.99□□□□□ -0.49
ITGA6-210ENST00000475302 OSBPP22059 807 aa11.99□□□□□ -0.49
ITGA6-210ENST00000475302 IL6STP40189 918 aaPredicted RBP11.99□□□□□ -0.49
ITGA6-210ENST00000475302 RFX5P48382 616 aaPredicted RBP11.99□□□□□ -0.49
ITGA6-210ENST00000475302 EIF5P55010 431 aaKnown RBP11.99□□□□□ -0.49
ITGA6-210ENST00000475302 SIK1P57059 783 aa11.99□□□□□ -0.49
ITGA6-210ENST00000475302 TCIRG1Q13488 830 aa11.99□□□□□ -0.49
ITGA6-210ENST00000475302 SYTL4Q96C24 671 aaPredicted RBP11.99□□□□□ -0.49
ITGA6-210ENST00000475302 TRPC5Q9UL62 973 aaPredicted RBP11.99□□□□□ -0.49
ITGA6-210ENST00000475302 ZBTB1Q9Y2K1 713 aa11.99□□□□□ -0.49
ITGA6-210ENST00000475302 NHSQ6T4R5 1651 aa11.99□□□□□ -0.49
ITGA6-210ENST00000475302 COL5A3P25940 1745 aaPredicted RBP11.99□□□□□ -0.49
ITGA6-210ENST00000475302 AFDNP55196 1824 aaKnown RBP11.98□□□□□ -0.49
ITGA6-210ENST00000475302 PALLDQ8WX93 1383 aa11.98□□□□□ -0.49
ITGA6-210ENST00000475302 MAP3K15Q6ZN16 1313 aa11.98□□□□□ -0.49
ITGA6-210ENST00000475302 ATP5J2-PTCD1G3V325 749 aa11.98□□□□□ -0.49
ITGA6-210ENST00000475302 RAB11FIP3O75154 756 aa11.98□□□□□ -0.49
ITGA6-210ENST00000475302 GSPT1P15170 499 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms