RNA–Protein interactions for RNA: ENST00000475004.6

DDX17-207, Transcript of DEAD-box helicase 17, humanhuman

TSL 3

Gene DDX17, Length 443 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-207ENST00000475004 C9orf78Q9NZ63 289 aaPredicted RBP12.84□□□□□ -0.35
DDX17-207ENST00000475004 TAF1P21675 1872 aa12.83□□□□□ -0.36
DDX17-207ENST00000475004 SNED1Q8TER0 1413 aa12.83□□□□□ -0.36
DDX17-207ENST00000475004 DALRD3Q5D0E6 543 aaKnown RBP12.83□□□□□ -0.36
DDX17-207ENST00000475004 FTSJ3Q8IY81 847 aaKnown RBP12.83□□□□□ -0.36
DDX17-207ENST00000475004 TTLL6Q8N841 843 aa12.83□□□□□ -0.36
DDX17-207ENST00000475004 TTLL11Q8NHH1 800 aa12.83□□□□□ -0.36
DDX17-207ENST00000475004 PANK1Q8TE04 598 aa12.83□□□□□ -0.36
DDX17-207ENST00000475004 MEIS3Q99687 375 aa12.83□□□□□ -0.36
DDX17-207ENST00000475004 BCS1LQ9Y276 419 aa12.83□□□□□ -0.36
DDX17-207ENST00000475004 RTL9Q8NET4 1388 aa12.82□□□□□ -0.36
DDX17-207ENST00000475004 LRRC37AA6NMS7 1700 aa12.82□□□□□ -0.36
DDX17-207ENST00000475004 HSP90B1P14625 803 aaKnown RBP12.82□□□□□ -0.36
DDX17-207ENST00000475004 FOXO4P98177 505 aa12.82□□□□□ -0.36
DDX17-207ENST00000475004 C20orf194Q5TEA3 1177 aa12.82□□□□□ -0.36
DDX17-207ENST00000475004 PELP1Q8IZL8 1130 aaKnown RBP12.82□□□□□ -0.36
DDX17-207ENST00000475004 ANKRD44Q8N8A2 993 aa12.82□□□□□ -0.36
DDX17-207ENST00000475004 CNKSR1Q969H4 720 aa12.82□□□□□ -0.36
DDX17-207ENST00000475004 RBM17Q96I25 401 aaKnown RBP12.82□□□□□ -0.36
DDX17-207ENST00000475004 CCDC85AQ96PX6 553 aaPredicted RBP12.82□□□□□ -0.36
DDX17-207ENST00000475004 CRAMP1Q96RY5 1269 aa12.82□□□□□ -0.36
DDX17-207ENST00000475004 GREM2Q9H772 168 aa12.82□□□□□ -0.36
DDX17-207ENST00000475004 SEC31BQ9NQW1 1179 aa12.82□□□□□ -0.36
DDX17-207ENST00000475004 CSF1RP07333 972 aa12.81□□□□□ -0.36
DDX17-207ENST00000475004 RRP1P56182 461 aaKnown RBP12.81□□□□□ -0.36
DDX17-207ENST00000475004 GRAPQ13588 217 aa12.81□□□□□ -0.36
DDX17-207ENST00000475004 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
DDX17-207ENST00000475004 CCDC152Q4G0S7 254 aa12.81□□□□□ -0.36
DDX17-207ENST00000475004 GRAPLQ8TC17 118 aaPredicted RBP12.81□□□□□ -0.36
DDX17-207ENST00000475004 C7orf43Q8WVR3 580 aa12.81□□□□□ -0.36
DDX17-207ENST00000475004 CELF1Q92879 486 aaKnown RBP12.81□□□□□ -0.36
DDX17-207ENST00000475004 PPEF1O14829 653 aaPredicted RBP12.8□□□□□ -0.36
DDX17-207ENST00000475004 GPR162Q16538 588 aa12.8□□□□□ -0.36
DDX17-207ENST00000475004 RABL6Q3YEC7 729 aaPredicted RBP12.8□□□□□ -0.36
DDX17-207ENST00000475004 OLFM4Q6UX06 510 aa12.8□□□□□ -0.36
DDX17-207ENST00000475004 DDX46Q7L014 1031 aaKnown RBP12.8□□□□□ -0.36
DDX17-207ENST00000475004 ITPRIPQ8IWB1 547 aa12.8□□□□□ -0.36
DDX17-207ENST00000475004 BICC1Q9H694 974 aaKnown RBP12.8□□□□□ -0.36
DDX17-207ENST00000475004 DUOX1Q9NRD9 1551 aa12.79□□□□□ -0.36
DDX17-207ENST00000475004 C21orf2O43822 256 aa12.79□□□□□ -0.36
DDX17-207ENST00000475004 UBTFL1P0CB47 393 aaPredicted RBP12.79□□□□□ -0.36
DDX17-207ENST00000475004 ALDH1B1P30837 517 aa12.79□□□□□ -0.36
DDX17-207ENST00000475004 LMBR1LQ6UX01 489 aa12.79□□□□□ -0.36
DDX17-207ENST00000475004 ZNF219Q9P2Y4 722 aaPredicted RBP12.79□□□□□ -0.36
DDX17-207ENST00000475004 LTBP1Q14766 1721 aa12.79□□□□□ -0.36
DDX17-207ENST00000475004 SPEF2Q9C093 1822 aa12.78□□□□□ -0.36
DDX17-207ENST00000475004 FER1L6Q2WGJ9 1857 aa12.78□□□□□ -0.36
DDX17-207ENST00000475004 ITGA6P23229 1130 aa12.78□□□□□ -0.36
DDX17-207ENST00000475004 PDE3AQ14432 1141 aa12.78□□□□□ -0.36
DDX17-207ENST00000475004 MVPQ14764 893 aaKnown RBP12.78□□□□□ -0.36
DDX17-207ENST00000475004 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.78□□□□□ -0.36
DDX17-207ENST00000475004 COG6Q9Y2V7 657 aa12.78□□□□□ -0.36
DDX17-207ENST00000475004 LRRFIP2Q9Y608 721 aaKnown RBP12.78□□□□□ -0.36
DDX17-207ENST00000475004 NFKBIEO00221 500 aa12.77□□□□□ -0.37
DDX17-207ENST00000475004 ZBTB7BO15156 539 aaPredicted RBP12.77□□□□□ -0.37
DDX17-207ENST00000475004 GNAI3P08754 354 aa12.77□□□□□ -0.37
DDX17-207ENST00000475004 MS4A1P11836 297 aa12.77□□□□□ -0.37
DDX17-207ENST00000475004 ATP6V0A2Q9Y487 856 aa12.77□□□□□ -0.37
DDX17-207ENST00000475004 GRIN3BO60391 1043 aa12.76□□□□□ -0.37
DDX17-207ENST00000475004 BBOX1O75936 387 aa12.76□□□□□ -0.37
DDX17-207ENST00000475004 RPS8P62241 208 aaKnown RBP12.76□□□□□ -0.37
DDX17-207ENST00000475004 RASSF7Q02833 373 aa12.76□□□□□ -0.37
DDX17-207ENST00000475004 CCDC93Q567U6 631 aa12.76□□□□□ -0.37
DDX17-207ENST00000475004 ANKRD18AQ8IVF6 992 aa12.76□□□□□ -0.37
DDX17-207ENST00000475004 CDC5LQ99459 802 aaKnown RBP12.76□□□□□ -0.37
DDX17-207ENST00000475004 CHMP3Q9Y3E7 222 aa12.76□□□□□ -0.37
DDX17-207ENST00000475004 A0A1B0GUL6 1792 aa12.76□□□□□ -0.37
DDX17-207ENST00000475004 PRELPP51888 382 aa12.75□□□□□ -0.37
DDX17-207ENST00000475004 TMC4Q7Z404 712 aa12.75□□□□□ -0.37
DDX17-207ENST00000475004 C1orf115Q9H7X2 142 aa12.75□□□□□ -0.37
DDX17-207ENST00000475004 LTBP3Q9NS15 1303 aa12.74□□□□□ -0.37
DDX17-207ENST00000475004 ANKRD18BA2A2Z9 1011 aa12.74□□□□□ -0.37
DDX17-207ENST00000475004 GNAI2P04899 355 aa12.74□□□□□ -0.37
DDX17-207ENST00000475004 RFX5P48382 616 aaPredicted RBP12.74□□□□□ -0.37
DDX17-207ENST00000475004 IFIT5Q13325 482 aaKnown RBP12.74□□□□□ -0.37
DDX17-207ENST00000475004 MTX1Q13505 466 aa12.74□□□□□ -0.37
DDX17-207ENST00000475004 SOGA3Q5TF21 947 aa12.74□□□□□ -0.37
DDX17-207ENST00000475004 ARHGAP27Q6ZUM4 889 aa12.74□□□□□ -0.37
DDX17-207ENST00000475004 SP8Q8IXZ3 490 aa12.74□□□□□ -0.37
DDX17-207ENST00000475004 ZNF594Q96JF6 807 aaPredicted RBP12.74□□□□□ -0.37
DDX17-207ENST00000475004 BSDC1Q9NW68 430 aaPredicted RBP12.74□□□□□ -0.37
DDX17-207ENST00000475004 DDX19BQ9UMR2 479 aa12.74□□□□□ -0.37
DDX17-207ENST00000475004 COL4A5P29400 1685 aa12.73□□□□□ -0.37
DDX17-207ENST00000475004 CCDC57Q2TAC2 916 aa12.73□□□□□ -0.37
DDX17-207ENST00000475004 CC2D2BQ6DHV5 1058 aa12.73□□□□□ -0.37
DDX17-207ENST00000475004 KLHDC4Q8TBB5 520 aa12.73□□□□□ -0.37
DDX17-207ENST00000475004 TAOK3Q9H2K8 898 aa12.73□□□□□ -0.37
DDX17-207ENST00000475004 ZBTB40Q9NUA8 1239 aa12.73□□□□□ -0.37
DDX17-207ENST00000475004 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
DDX17-207ENST00000475004 IGHMBP2P38935 993 aaKnown RBP12.72□□□□□ -0.37
DDX17-207ENST00000475004 GPSM2P81274 684 aa12.72□□□□□ -0.37
DDX17-207ENST00000475004 FKBP4Q02790 459 aaKnown RBP eCLIP12.72□□□□□ -0.37
DDX17-207ENST00000475004 RTKN2Q8IZC4 609 aa12.72□□□□□ -0.37
DDX17-207ENST00000475004 PSMD1Q99460 953 aa12.72□□□□□ -0.37
DDX17-207ENST00000475004 HDAC5Q9UQL6 1122 aa12.72□□□□□ -0.37
DDX17-207ENST00000475004 SUPT16HQ9Y5B9 1047 aaKnown RBP12.72□□□□□ -0.37
DDX17-207ENST00000475004 SBF1O95248 1867 aa12.72□□□□□ -0.37
DDX17-207ENST00000475004 TIAM2Q8IVF5 1701 aa12.71□□□□□ -0.37
DDX17-207ENST00000475004 PNMA6EA0A0J9YXQ4 647 aa12.71□□□□□ -0.37
DDX17-207ENST00000475004 PTPN12Q05209 780 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms