RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 GRAPQ13588 217 aa18.73■□□□□ 0.59
COL2A1-205ENST00000474996 GRAPLQ8TC17 118 aaPredicted RBP18.73■□□□□ 0.59
COL2A1-205ENST00000474996 GPRC5DQ9NZD1 345 aa18.73■□□□□ 0.59
COL2A1-205ENST00000474996 DDX60Q8IY21 1712 aaKnown RBP18.73■□□□□ 0.59
COL2A1-205ENST00000474996 TRPM7Q96QT4 1865 aa18.73■□□□□ 0.59
COL2A1-205ENST00000474996 PLBD2Q8NHP8 589 aa18.72■□□□□ 0.59
COL2A1-205ENST00000474996 TRAF5O00463 557 aa18.71■□□□□ 0.59
COL2A1-205ENST00000474996 HOXB7P09629 217 aa18.71■□□□□ 0.59
COL2A1-205ENST00000474996 CTCFP49711 727 aaPredicted RBP18.71■□□□□ 0.59
COL2A1-205ENST00000474996 KIAA2012Q0VF49 1180 aa18.71■□□□□ 0.59
COL2A1-205ENST00000474996 ANKRD13DQ6ZTN6 518 aa18.71■□□□□ 0.59
COL2A1-205ENST00000474996 ADARB2Q9NS39 739 aaKnown RBP18.71■□□□□ 0.59
COL2A1-205ENST00000474996 WBP1LQ9NX94 342 aa18.71■□□□□ 0.59
COL2A1-205ENST00000474996 DBF4Q9UBU7 674 aaPredicted RBP18.71■□□□□ 0.59
COL2A1-205ENST00000474996 WDR33Q9C0J8 1336 aaKnown RBP18.71■□□□□ 0.59
COL2A1-205ENST00000474996 LRRC37AA6NMS7 1700 aa18.7■□□□□ 0.58
COL2A1-205ENST00000474996 ATP5J2-PTCD1G3V325 749 aa18.7■□□□□ 0.58
COL2A1-205ENST00000474996 GMPSP49915 693 aaPredicted RBP18.7■□□□□ 0.58
COL2A1-205ENST00000474996 CFAP44Q96MT7 982 aa18.7■□□□□ 0.58
COL2A1-205ENST00000474996 ISCA1Q9BUE6 129 aa18.7■□□□□ 0.58
COL2A1-205ENST00000474996 PRDM10Q9NQV6 1147 aa18.7■□□□□ 0.58
COL2A1-205ENST00000474996 DUOX1Q9NRD9 1551 aa18.7■□□□□ 0.58
COL2A1-205ENST00000474996 RAD17O75943 681 aa18.69■□□□□ 0.58
COL2A1-205ENST00000474996 DUSP27Q5VZP5 1158 aa18.69■□□□□ 0.58
COL2A1-205ENST00000474996 CIAPIN1Q6FI81 312 aa18.69■□□□□ 0.58
COL2A1-205ENST00000474996 FAM89AQ96GI7 184 aa18.69■□□□□ 0.58
COL2A1-205ENST00000474996 CST9Q5W186 159 aa18.68■□□□□ 0.58
COL2A1-205ENST00000474996 TMC4Q7Z404 712 aa18.68■□□□□ 0.58
COL2A1-205ENST00000474996 MBIPQ9NS73 344 aa18.68■□□□□ 0.58
COL2A1-205ENST00000474996 HYPKQ9NX55 129 aa18.68■□□□□ 0.58
COL2A1-205ENST00000474996 YDJCA8MPS7 323 aa18.67■□□□□ 0.58
COL2A1-205ENST00000474996 LBX1P52954 281 aa18.67■□□□□ 0.58
COL2A1-205ENST00000474996 TNIP1Q15025 636 aa18.67■□□□□ 0.58
COL2A1-205ENST00000474996 RTL5Q5HYW3 569 aaPredicted RBP18.67■□□□□ 0.58
COL2A1-205ENST00000474996 PAXIP1Q6ZW49 1069 aaPredicted RBP18.67■□□□□ 0.58
COL2A1-205ENST00000474996 CELF1Q92879 486 aaKnown RBP18.67■□□□□ 0.58
COL2A1-205ENST00000474996 BCL2L13Q9BXK5 485 aa18.67■□□□□ 0.58
COL2A1-205ENST00000474996 COL4A1P02462 1669 aa18.66■□□□□ 0.58
COL2A1-205ENST00000474996 MAP2K1Q02750 393 aaPredicted RBP18.66■□□□□ 0.58
COL2A1-205ENST00000474996 GRM1Q13255 1194 aa18.66■□□□□ 0.58
COL2A1-205ENST00000474996 SF3B3Q15393 1217 aaKnown RBP18.66■□□□□ 0.58
COL2A1-205ENST00000474996 CAPNS2Q96L46 248 aa18.66■□□□□ 0.58
COL2A1-205ENST00000474996 THSD7BQ9C0I4 1608 aa18.66■□□□□ 0.58
COL2A1-205ENST00000474996 CYP4F22Q6NT55 531 aa18.65■□□□□ 0.58
COL2A1-205ENST00000474996 GLIS2Q9BZE0 524 aaPredicted RBP18.65■□□□□ 0.58
COL2A1-205ENST00000474996 PRKRIP1Q9H875 184 aaPredicted RBP18.65■□□□□ 0.58
COL2A1-205ENST00000474996 NSFL1CQ9UNZ2 370 aaKnown RBP18.65■□□□□ 0.58
COL2A1-205ENST00000474996 TLL2Q9Y6L7 1015 aa18.65■□□□□ 0.58
COL2A1-205ENST00000474996 CDHR2Q9BYE9 1310 aa18.65■□□□□ 0.58
COL2A1-205ENST00000474996 SHTN1A0MZ66 631 aa18.64■□□□□ 0.57
COL2A1-205ENST00000474996 ZNF853P0CG23 659 aa18.64■□□□□ 0.57
COL2A1-205ENST00000474996 HSPA8P11142 646 aaKnown RBP18.64■□□□□ 0.57
COL2A1-205ENST00000474996 ECE1P42892 770 aa18.64■□□□□ 0.57
COL2A1-205ENST00000474996 HIRAP54198 1017 aaPredicted RBP18.64■□□□□ 0.57
COL2A1-205ENST00000474996 TRPM4Q8TD43 1214 aa18.64■□□□□ 0.57
COL2A1-205ENST00000474996 IRS4O14654 1257 aaPredicted RBP18.63■□□□□ 0.57
COL2A1-205ENST00000474996 APAF1O14727 1248 aa18.63■□□□□ 0.57
COL2A1-205ENST00000474996 TRIM28Q13263 835 aaKnown RBP18.63■□□□□ 0.57
COL2A1-205ENST00000474996 WASHC4Q2M389 1173 aa18.63■□□□□ 0.57
COL2A1-205ENST00000474996 RIC3Q7Z5B4 369 aa18.63■□□□□ 0.57
COL2A1-205ENST00000474996 PHAXQ9H814 394 aaKnown RBP18.63■□□□□ 0.57
COL2A1-205ENST00000474996 PGAP2Q9UHJ9 254 aa18.63■□□□□ 0.57
COL2A1-205ENST00000474996 CNOT7Q9UIV1 285 aaKnown RBP18.63■□□□□ 0.57
COL2A1-205ENST00000474996 ELL2O00472 640 aaPredicted RBP18.62■□□□□ 0.57
COL2A1-205ENST00000474996 RIMBP2O15034 1052 aa18.62■□□□□ 0.57
COL2A1-205ENST00000474996 CELF2O95319 508 aaKnown RBP18.62■□□□□ 0.57
COL2A1-205ENST00000474996 GPSM2P81274 684 aa18.62■□□□□ 0.57
COL2A1-205ENST00000474996 GOLGA2Q08379 1002 aa18.62■□□□□ 0.57
COL2A1-205ENST00000474996 GPR101Q96P66 508 aaPredicted RBP18.62■□□□□ 0.57
COL2A1-205ENST00000474996 DBNDD1Q9H9R9 158 aa18.62■□□□□ 0.57
COL2A1-205ENST00000474996 IFT57Q9NWB7 429 aa18.62■□□□□ 0.57
COL2A1-205ENST00000474996 POLLQ9UGP5 575 aa18.62■□□□□ 0.57
COL2A1-205ENST00000474996 ZBTB12Q9Y330 459 aaPredicted RBP18.62■□□□□ 0.57
COL2A1-205ENST00000474996 C6orf229H3BNL8 230 aa18.61■□□□□ 0.57
COL2A1-205ENST00000474996 H7C1D1 291 aa18.61■□□□□ 0.57
COL2A1-205ENST00000474996 SAPCD2Q86UD0 394 aa18.61■□□□□ 0.57
COL2A1-205ENST00000474996 MICALL2Q8IY33 904 aa18.61■□□□□ 0.57
COL2A1-205ENST00000474996 ZC3H15Q8WU90 426 aaKnown RBP18.61■□□□□ 0.57
COL2A1-205ENST00000474996 PSMD14O00487 310 aa18.6■□□□□ 0.57
COL2A1-205ENST00000474996 GNAI1P63096 354 aa18.6■□□□□ 0.57
COL2A1-205ENST00000474996 ZBTB38Q8NAP3 1195 aaPredicted RBP18.6■□□□□ 0.57
COL2A1-205ENST00000474996 ZNF408Q9H9D4 720 aa18.6■□□□□ 0.57
COL2A1-205ENST00000474996 AOC2O75106 756 aa18.59■□□□□ 0.57
COL2A1-205ENST00000474996 RPS8P62241 208 aaKnown RBP18.59■□□□□ 0.57
COL2A1-205ENST00000474996 CALD1Q05682 793 aaKnown RBP18.59■□□□□ 0.57
COL2A1-205ENST00000474996 CDC37L1Q7L3B6 337 aa18.59■□□□□ 0.57
COL2A1-205ENST00000474996 MYD88Q99836 296 aa18.59■□□□□ 0.57
COL2A1-205ENST00000474996 BEGAINQ9BUH8 593 aa18.59■□□□□ 0.57
COL2A1-205ENST00000474996 SEC31BQ9NQW1 1179 aa18.59■□□□□ 0.57
COL2A1-205ENST00000474996 ECE2O60344 883 aa18.58■□□□□ 0.56
COL2A1-205ENST00000474996 DOK7Q18PE1 504 aa18.58■□□□□ 0.56
COL2A1-205ENST00000474996 SAMD7Q7Z3H4 446 aa18.58■□□□□ 0.56
COL2A1-205ENST00000474996 C8orf58Q8NAV2 365 aa18.58■□□□□ 0.56
COL2A1-205ENST00000474996 TBC1D16Q8TBP0 767 aa18.58■□□□□ 0.56
COL2A1-205ENST00000474996 DPF2Q92785 391 aa18.58■□□□□ 0.56
COL2A1-205ENST00000474996 EYA3Q99504 573 aa18.58■□□□□ 0.56
COL2A1-205ENST00000474996 KCNQ5Q9NR82 932 aa18.58■□□□□ 0.56
COL2A1-205ENST00000474996 POLR2AP24928 1970 aaKnown RBP18.57■□□□□ 0.56
COL2A1-205ENST00000474996 SCN9AQ15858 1988 aa18.57■□□□□ 0.56
COL2A1-205ENST00000474996 RTL9Q8NET4 1388 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms